BLASTX nr result

ID: Coptis24_contig00013192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013192
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160202.1| PREDICTED: ABC transporter G family member 3...   212   3e-53
ref|XP_004143156.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   212   3e-53
ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|2...   199   1e-49
emb|CBI15958.3| unnamed protein product [Vitis vinifera]              198   4e-49
ref|XP_002279155.1| PREDICTED: ABC transporter G family member 3...   198   4e-49

>ref|XP_004160202.1| PREDICTED: ABC transporter G family member 31-like [Cucumis
           sativus]
          Length = 743

 Score =  212 bits (539), Expect = 3e-53
 Identities = 94/102 (92%), Positives = 101/102 (99%)
 Frame = -2

Query: 310 IFRTCQVAFVGFVTCTMFLRTRLHPTDEINGNLYLSCLFFGLVHMMFNGFSELPIMISRL 131
           IFRTCQVAFVGFVTCTMFLRTR+HPTDEINGNLYLSCLFFGL+HMMFNGFSELP+MISRL
Sbjct: 532 IFRTCQVAFVGFVTCTMFLRTRIHPTDEINGNLYLSCLFFGLIHMMFNGFSELPLMISRL 591

Query: 130 PVFYKQRDNLFHPAWAWSIPSWLLRVPYSVIEAVVWSCVVYY 5
           PVFYKQRDNLFHP+W+WSI SW+LRVPYSV+EAVVWSCVVYY
Sbjct: 592 PVFYKQRDNLFHPSWSWSISSWILRVPYSVLEAVVWSCVVYY 633


>ref|XP_004143156.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member
           31-like [Cucumis sativus]
          Length = 1486

 Score =  212 bits (539), Expect = 3e-53
 Identities = 94/102 (92%), Positives = 101/102 (99%)
 Frame = -2

Query: 310 IFRTCQVAFVGFVTCTMFLRTRLHPTDEINGNLYLSCLFFGLVHMMFNGFSELPIMISRL 131
           IFRTCQVAFVGFVTCTMFLRTR+HPTDEINGNLYLSCLFFGL+HMMFNGFSELP+MISRL
Sbjct: 532 IFRTCQVAFVGFVTCTMFLRTRIHPTDEINGNLYLSCLFFGLIHMMFNGFSELPLMISRL 591

Query: 130 PVFYKQRDNLFHPAWAWSIPSWLLRVPYSVIEAVVWSCVVYY 5
           PVFYKQRDNLFHP+W+WSI SW+LRVPYSV+EAVVWSCVVYY
Sbjct: 592 PVFYKQRDNLFHPSWSWSISSWILRVPYSVLEAVVWSCVVYY 633


>ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|222847070|gb|EEE84617.1|
           predicted protein [Populus trichocarpa]
          Length = 1432

 Score =  199 bits (507), Expect = 1e-49
 Identities = 88/102 (86%), Positives = 98/102 (96%)
 Frame = -2

Query: 310 IFRTCQVAFVGFVTCTMFLRTRLHPTDEINGNLYLSCLFFGLVHMMFNGFSELPIMISRL 131
           IFRTCQVAFVGFVTCT+FLRTRLHPTDE+NGNLYLSCLFFGLVHMMFNGFSEL ++I RL
Sbjct: 531 IFRTCQVAFVGFVTCTLFLRTRLHPTDEMNGNLYLSCLFFGLVHMMFNGFSELSLLIFRL 590

Query: 130 PVFYKQRDNLFHPAWAWSIPSWLLRVPYSVIEAVVWSCVVYY 5
           PVFYKQRDNLFHPAW WS+ S++LR+PYS++EAVVWSCVVYY
Sbjct: 591 PVFYKQRDNLFHPAWVWSVASFILRLPYSIVEAVVWSCVVYY 632


>emb|CBI15958.3| unnamed protein product [Vitis vinifera]
          Length = 1483

 Score =  198 bits (503), Expect = 4e-49
 Identities = 85/103 (82%), Positives = 97/103 (94%)
 Frame = -2

Query: 310 IFRTCQVAFVGFVTCTMFLRTRLHPTDEINGNLYLSCLFFGLVHMMFNGFSELPIMISRL 131
           IFRTCQVAFVG +TCTM+LRTR+HP +E +G LYLSCLFFGLVHMMFNGFSELPIMI+RL
Sbjct: 589 IFRTCQVAFVGLITCTMYLRTRIHPRNEADGELYLSCLFFGLVHMMFNGFSELPIMIARL 648

Query: 130 PVFYKQRDNLFHPAWAWSIPSWLLRVPYSVIEAVVWSCVVYYP 2
           P+FYKQRDN FHPAWAWS+ SW+LR+PYSVIE+V+WSCVVYYP
Sbjct: 649 PIFYKQRDNYFHPAWAWSVASWILRLPYSVIESVIWSCVVYYP 691


>ref|XP_002279155.1| PREDICTED: ABC transporter G family member 31-like [Vitis vinifera]
          Length = 1415

 Score =  198 bits (503), Expect = 4e-49
 Identities = 85/103 (82%), Positives = 97/103 (94%)
 Frame = -2

Query: 310 IFRTCQVAFVGFVTCTMFLRTRLHPTDEINGNLYLSCLFFGLVHMMFNGFSELPIMISRL 131
           IFRTCQVAFVG +TCTM+LRTR+HP +E +G LYLSCLFFGLVHMMFNGFSELPIMI+RL
Sbjct: 525 IFRTCQVAFVGLITCTMYLRTRIHPRNEADGELYLSCLFFGLVHMMFNGFSELPIMIARL 584

Query: 130 PVFYKQRDNLFHPAWAWSIPSWLLRVPYSVIEAVVWSCVVYYP 2
           P+FYKQRDN FHPAWAWS+ SW+LR+PYSVIE+V+WSCVVYYP
Sbjct: 585 PIFYKQRDNYFHPAWAWSVASWILRLPYSVIESVIWSCVVYYP 627


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