BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013188
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21880.3| unnamed protein product [Vitis vinifera]              122   5e-26
ref|XP_002329795.1| predicted protein [Populus trichocarpa] gi|2...   122   5e-26
ref|XP_002305782.1| predicted protein [Populus trichocarpa] gi|2...   122   9e-26
ref|XP_002863599.1| predicted protein [Arabidopsis lyrata subsp....   120   2e-25
ref|NP_199241.2| putative E3 ubiquitin-protein ligase RING1a [Ar...   120   2e-25

>emb|CBI21880.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score =  122 bits (307), Expect = 5e-26
 Identities = 58/129 (44%), Positives = 83/129 (64%)
 Frame = -1

Query: 627 SEEVVLLTTRVKVRYVEVNLVAVRKPFECPICLGIMKETRTLQDCMHRFCRDCIEKEMGL 448
           S+E    +T  K  +V V L  +RK  +CPICLGI+K+TRT+ +C+HRFCR+CI+K M L
Sbjct: 153 SDENPSSSTEEKPEFVFVGLPDIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRL 212

Query: 447 GNNECPVCHVRIESRSSLREDIRYNKMILALFGEVEKNEEQAPVPDKDKSVRGKQVQNEG 268
           GNNECP C     SR SLR+D  Y+ +I AL+ +++K EE+     +++  R KQ+Q   
Sbjct: 213 GNNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEEEELAFHEEEQTRNKQIQASI 272

Query: 267 CQSNQGSNE 241
            Q  Q  +E
Sbjct: 273 AQILQRQSE 281


>ref|XP_002329795.1| predicted protein [Populus trichocarpa] gi|222870857|gb|EEF07988.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  122 bits (307), Expect = 5e-26
 Identities = 53/107 (49%), Positives = 75/107 (70%)
 Frame = -1

Query: 597 VKVRYVEVNLVAVRKPFECPICLGIMKETRTLQDCMHRFCRDCIEKEMGLGNNECPVCHV 418
           VK  YV V L  +RK  +CPICLGI+++TRT+ +C+HRFCR+CI+K M LGNNECP C  
Sbjct: 61  VKEEYVVVKLSEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRT 120

Query: 417 RIESRSSLREDIRYNKMILALFGEVEKNEEQAPVPDKDKSVRGKQVQ 277
              SR SLR+D  Y+ +I AL+ +++K EE+     +D+  R K++Q
Sbjct: 121 HCASRRSLRDDPNYDALIAALYPDIDKYEEEELAFQEDEKARNKEIQ 167


>ref|XP_002305782.1| predicted protein [Populus trichocarpa] gi|222848746|gb|EEE86293.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score =  122 bits (305), Expect = 9e-26
 Identities = 53/107 (49%), Positives = 75/107 (70%)
 Frame = -1

Query: 597 VKVRYVEVNLVAVRKPFECPICLGIMKETRTLQDCMHRFCRDCIEKEMGLGNNECPVCHV 418
           VK  YV V L  +RK  +CPICLGI+++TRT+ +C+HRFCR+CI+K M LGNNECP C  
Sbjct: 72  VKEEYVVVKLSEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRT 131

Query: 417 RIESRSSLREDIRYNKMILALFGEVEKNEEQAPVPDKDKSVRGKQVQ 277
              SR SLR+D  Y+ +I AL+ +++K EE+     +++  R KQ+Q
Sbjct: 132 HCASRRSLRDDPNYDALISALYPDIDKYEEEELAFQEEEKARNKQIQ 178


>ref|XP_002863599.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309434|gb|EFH39858.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 516

 Score =  120 bits (302), Expect = 2e-25
 Identities = 53/115 (46%), Positives = 79/115 (68%)
 Frame = -1

Query: 585 YVEVNLVAVRKPFECPICLGIMKETRTLQDCMHRFCRDCIEKEMGLGNNECPVCHVRIES 406
           ++E++L  +RK  +CPICLGI+K+TRT+ +C+HRFCR+CI+K M LGNNECP C     S
Sbjct: 117 FMEIDLGEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRKHCAS 176

Query: 405 RSSLREDIRYNKMILALFGEVEKNEEQAPVPDKDKSVRGKQVQNEGCQSNQGSNE 241
           R SLR+D +++ +I ALF  ++  EE+     +D+  R KQ+Q    Q +Q  +E
Sbjct: 177 RRSLRDDPKFDALIAALFTNIDSYEEEELAFHEDEMARNKQIQASIAQISQRQSE 231


>ref|NP_199241.2| putative E3 ubiquitin-protein ligase RING1a [Arabidopsis thaliana]
           gi|302425246|sp|Q9FKW0.2|RNG1A_ARATH RecName:
           Full=Putative E3 ubiquitin-protein ligase RING1a;
           AltName: Full=Polycomb complex protein RING1a; AltName:
           Full=Protein RING1a; Short=AtRING1a; AltName: Full=Ring
           finger protein 434 gi|332007702|gb|AED95085.1| putative
           E3 ubiquitin-protein ligase RING1a [Arabidopsis
           thaliana]
          Length = 522

 Score =  120 bits (302), Expect = 2e-25
 Identities = 53/115 (46%), Positives = 79/115 (68%)
 Frame = -1

Query: 585 YVEVNLVAVRKPFECPICLGIMKETRTLQDCMHRFCRDCIEKEMGLGNNECPVCHVRIES 406
           ++E++L  +RK  +CPICLGI+K+TRT+ +C+HRFCR+CI+K M LGNNECP C     S
Sbjct: 122 FMEIDLGEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRKHCAS 181

Query: 405 RSSLREDIRYNKMILALFGEVEKNEEQAPVPDKDKSVRGKQVQNEGCQSNQGSNE 241
           R SLR+D +++ +I ALF  ++  EE+     +D+  R KQ+Q    Q +Q  +E
Sbjct: 182 RRSLRDDPKFDALIAALFTNIDSYEEEELAFHEDEMARNKQIQASIAQISQRQSE 236