BLASTX nr result

ID: Coptis24_contig00013179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013179
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309630.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06
emb|CBI21048.3| unnamed protein product [Vitis vinifera]               55   8e-06
ref|XP_002285150.2| PREDICTED: uncharacterized protein LOC100266...    55   8e-06
ref|XP_002324862.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06
emb|CAN68624.1| hypothetical protein VITISV_010682 [Vitis vinifera]    55   8e-06

>ref|XP_002309630.1| predicted protein [Populus trichocarpa] gi|222855606|gb|EEE93153.1|
           predicted protein [Populus trichocarpa]
          Length = 407

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = +3

Query: 3   SKANSEEEYMDLQTLWDRTNDAINTIIR 86
           SKANSE EYM+L+TLWDRTNDAINTIIR
Sbjct: 67  SKANSEAEYMELKTLWDRTNDAINTIIR 94


>emb|CBI21048.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +3

Query: 3   SKANSEEEYMDLQTLWDRTNDAINTIIR 86
           SKANSE EYMDL+TLWDR NDAINTIIR
Sbjct: 67  SKANSEAEYMDLKTLWDRANDAINTIIR 94


>ref|XP_002285150.2| PREDICTED: uncharacterized protein LOC100266444 [Vitis vinifera]
          Length = 414

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +3

Query: 3   SKANSEEEYMDLQTLWDRTNDAINTIIR 86
           SKANSE EYMDL+TLWDR NDAINTIIR
Sbjct: 67  SKANSEAEYMDLKTLWDRANDAINTIIR 94


>ref|XP_002324862.1| predicted protein [Populus trichocarpa] gi|222866296|gb|EEF03427.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +3

Query: 3   SKANSEEEYMDLQTLWDRTNDAINTIIR 86
           SKANSE EYMDL+TLWDR NDAINTIIR
Sbjct: 67  SKANSEAEYMDLKTLWDRANDAINTIIR 94


>emb|CAN68624.1| hypothetical protein VITISV_010682 [Vitis vinifera]
          Length = 526

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +3

Query: 3   SKANSEEEYMDLQTLWDRTNDAINTIIR 86
           SKANSE EYMDL+TLWDR NDAINTIIR
Sbjct: 91  SKANSEAEYMDLKTLWDRANDAINTIIR 118


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