BLASTX nr result

ID: Coptis24_contig00013174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013174
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264600.1| PREDICTED: protein COBRA [Vitis vinifera] gi...   361   9e-98
ref|XP_002281199.1| PREDICTED: protein COBRA isoform 1 [Vitis vi...   359   4e-97
emb|CAN68249.1| hypothetical protein VITISV_020126 [Vitis vinifera]   358   7e-97
ref|XP_002460985.1| hypothetical protein SORBIDRAFT_02g038720 [S...   354   1e-95
emb|CBI16946.3| unnamed protein product [Vitis vinifera]              352   5e-95

>ref|XP_002264600.1| PREDICTED: protein COBRA [Vitis vinifera]
           gi|297734083|emb|CBI15330.3| unnamed protein product
           [Vitis vinifera]
          Length = 456

 Score =  361 bits (927), Expect = 9e-98
 Identities = 159/208 (76%), Positives = 178/208 (85%)
 Frame = -2

Query: 780 PTCSCGCENNITQPGSCVMPNSPYLASAIAGPRKNSFTPLVQCTTHMCPIRIHWHVKLNY 601
           PTC+CGC+NN+T PGSCV PN+PYLAS + G  K S+ PLVQCT+HMCPIR+HWHVKLNY
Sbjct: 249 PTCTCGCQNNLTHPGSCVDPNNPYLASVVEGSGKTSYQPLVQCTSHMCPIRVHWHVKLNY 308

Query: 600 KEYWRVKISITNFNYRMNYTQWNLVAQHPNFDNLTTSFSFNYKSITPFATINDTAMLWGI 421
           K+YWRVKI+ITNFNYRMNYTQWNLV QHPNFDNLT  FSFNYKS+TP+A INDTAMLWG+
Sbjct: 309 KDYWRVKITITNFNYRMNYTQWNLVVQHPNFDNLTQIFSFNYKSLTPYAAINDTAMLWGV 368

Query: 420 KFYNDLLMQNGPSGNVQSELLFRKDMETFTFEKGWAFPRRIYFNGDNCVMPPPEAYPWLP 241
           KFYNDLL Q GP GNVQSELLFRKD  TFTF+KGWAFPRRIYFNGDNCVMPPP+AYPWLP
Sbjct: 369 KFYNDLLSQAGPLGNVQSELLFRKDKATFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLP 428

Query: 240 NASPYQVISILRPAMAILVSLAFLLAYA 157
           NAS    +S+L   + IL     +LAYA
Sbjct: 429 NASSRPTVSLLYSILTILAVSVIVLAYA 456


>ref|XP_002281199.1| PREDICTED: protein COBRA isoform 1 [Vitis vinifera]
          Length = 456

 Score =  359 bits (921), Expect = 4e-97
 Identities = 159/207 (76%), Positives = 180/207 (86%)
 Frame = -2

Query: 780 PTCSCGCENNITQPGSCVMPNSPYLASAIAGPRKNSFTPLVQCTTHMCPIRIHWHVKLNY 601
           PTC+CGC+NNITQPGSCV  +SPYLAS ++G  KNS+TPLVQCT HMCPIR+HWHVKL+Y
Sbjct: 249 PTCTCGCQNNITQPGSCVEEDSPYLASVVSGSGKNSYTPLVQCTKHMCPIRVHWHVKLSY 308

Query: 600 KEYWRVKISITNFNYRMNYTQWNLVAQHPNFDNLTTSFSFNYKSITPFATINDTAMLWGI 421
           KEYWRVK++ITNFNYRMNYTQWNLV QHPNFDNLT  FSFNYKS+TP+A INDTAMLWG+
Sbjct: 309 KEYWRVKVTITNFNYRMNYTQWNLVVQHPNFDNLTQIFSFNYKSLTPYAAINDTAMLWGV 368

Query: 420 KFYNDLLMQNGPSGNVQSELLFRKDMETFTFEKGWAFPRRIYFNGDNCVMPPPEAYPWLP 241
           KFYNDLL+Q GP GNVQSELLFRKD  TFTFEKGWAFPRRIYFNGDNCVMPPP++YPWLP
Sbjct: 369 KFYNDLLVQAGPLGNVQSELLFRKDKSTFTFEKGWAFPRRIYFNGDNCVMPPPDSYPWLP 428

Query: 240 NASPYQVISILRPAMAILVSLAFLLAY 160
           NA+     S+L   M +L +L  L A+
Sbjct: 429 NATSRTSTSLLTLIMVLLSALLLLNAH 455


>emb|CAN68249.1| hypothetical protein VITISV_020126 [Vitis vinifera]
          Length = 469

 Score =  358 bits (919), Expect = 7e-97
 Identities = 161/208 (77%), Positives = 181/208 (87%)
 Frame = -2

Query: 780 PTCSCGCENNITQPGSCVMPNSPYLASAIAGPRKNSFTPLVQCTTHMCPIRIHWHVKLNY 601
           PTC+CGC+NNITQPGSCV  +SPYLAS ++G  KNS+TPLVQCT HMCPIR+HWHVKL+Y
Sbjct: 249 PTCTCGCQNNITQPGSCVEEDSPYLASVVSGSGKNSYTPLVQCTKHMCPIRVHWHVKLSY 308

Query: 600 KEYWRVKISITNFNYRMNYTQWNLVAQHPNFDNLTTSFSFNYKSITPFATINDTAMLWGI 421
           KEYWRVK++ITNFNYRMNYTQWNLV QHPNFDNLT  FSFNYKS+TP+A INDTAMLWG+
Sbjct: 309 KEYWRVKVTITNFNYRMNYTQWNLVVQHPNFDNLTQIFSFNYKSLTPYAAINDTAMLWGV 368

Query: 420 KFYNDLLMQNGPSGNVQSELLFRKDMETFTFEKGWAFPRRIYFNGDNCVMPPPEAYPWLP 241
           KFYNDLL+Q GP GNVQSELLFRKD  TFTFEKGWAFPRRIYFNGDNCVMPPP++YPWLP
Sbjct: 369 KFYNDLLVQAGPLGNVQSELLFRKDKSTFTFEKGWAFPRRIYFNGDNCVMPPPDSYPWLP 428

Query: 240 NASPYQVISILRPAMAILVSLAFLLAYA 157
           NA+     S+L     I+V L+ LL YA
Sbjct: 429 NATSRTSTSLL---TLIMVLLSALLLYA 453


>ref|XP_002460985.1| hypothetical protein SORBIDRAFT_02g038720 [Sorghum bicolor]
           gi|241924362|gb|EER97506.1| hypothetical protein
           SORBIDRAFT_02g038720 [Sorghum bicolor]
          Length = 458

 Score =  354 bits (909), Expect = 1e-95
 Identities = 156/205 (76%), Positives = 174/205 (84%)
 Frame = -2

Query: 780 PTCSCGCENNITQPGSCVMPNSPYLASAIAGPRKNSFTPLVQCTTHMCPIRIHWHVKLNY 601
           PTCSCGC+NN T PGSCV  NSPYLAS +  P KNS  PLVQCT+HMCPIR+HWHVK+NY
Sbjct: 250 PTCSCGCQNNSTAPGSCVEGNSPYLASVVNDPNKNSLAPLVQCTSHMCPIRVHWHVKVNY 309

Query: 600 KEYWRVKISITNFNYRMNYTQWNLVAQHPNFDNLTTSFSFNYKSITPFATINDTAMLWGI 421
           KEYWRVKI++TNFNYRMNY+QWNLVAQHPNFDNLTT FSFNYK + P+  INDTAMLWGI
Sbjct: 310 KEYWRVKITVTNFNYRMNYSQWNLVAQHPNFDNLTTIFSFNYKPLNPYGVINDTAMLWGI 369

Query: 420 KFYNDLLMQNGPSGNVQSELLFRKDMETFTFEKGWAFPRRIYFNGDNCVMPPPEAYPWLP 241
           K+YNDLLM  GP GNVQSELLFRK+  TFTF+KGWAFPRR+YFNGDNCVMPPP+AYPWLP
Sbjct: 370 KYYNDLLMTAGPDGNVQSELLFRKEPSTFTFQKGWAFPRRVYFNGDNCVMPPPDAYPWLP 429

Query: 240 NASPYQVISILRPAMAILVSLAFLL 166
           NASP    S+L P +A   + A LL
Sbjct: 430 NASPRLSASLLLPFVAAWTAFAILL 454


>emb|CBI16946.3| unnamed protein product [Vitis vinifera]
          Length = 436

 Score =  352 bits (903), Expect = 5e-95
 Identities = 152/183 (83%), Positives = 169/183 (92%)
 Frame = -2

Query: 780 PTCSCGCENNITQPGSCVMPNSPYLASAIAGPRKNSFTPLVQCTTHMCPIRIHWHVKLNY 601
           PTC+CGC+NNITQPGSCV  +SPYLAS ++G  KNS+TPLVQCT HMCPIR+HWHVKL+Y
Sbjct: 249 PTCTCGCQNNITQPGSCVEEDSPYLASVVSGSGKNSYTPLVQCTKHMCPIRVHWHVKLSY 308

Query: 600 KEYWRVKISITNFNYRMNYTQWNLVAQHPNFDNLTTSFSFNYKSITPFATINDTAMLWGI 421
           KEYWRVK++ITNFNYRMNYTQWNLV QHPNFDNLT  FSFNYKS+TP+A INDTAMLWG+
Sbjct: 309 KEYWRVKVTITNFNYRMNYTQWNLVVQHPNFDNLTQIFSFNYKSLTPYAAINDTAMLWGV 368

Query: 420 KFYNDLLMQNGPSGNVQSELLFRKDMETFTFEKGWAFPRRIYFNGDNCVMPPPEAYPWLP 241
           KFYNDLL+Q GP GNVQSELLFRKD  TFTFEKGWAFPRRIYFNGDNCVMPPP++YPWLP
Sbjct: 369 KFYNDLLVQAGPLGNVQSELLFRKDKSTFTFEKGWAFPRRIYFNGDNCVMPPPDSYPWLP 428

Query: 240 NAS 232
           NA+
Sbjct: 429 NAT 431


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