BLASTX nr result
ID: Coptis24_contig00013172
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013172 (220 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002527086.1| conserved hypothetical protein [Ricinus comm... 116 2e-24 ref|XP_003556168.1| PREDICTED: 30S ribosomal protein S1-like [Gl... 114 6e-24 ref|XP_003535559.1| PREDICTED: uncharacterized protein LOC100820... 112 4e-23 ref|XP_002263508.2| PREDICTED: uncharacterized protein LOC100240... 109 2e-22 emb|CBI29366.3| unnamed protein product [Vitis vinifera] 109 2e-22 >ref|XP_002527086.1| conserved hypothetical protein [Ricinus communis] gi|223533509|gb|EEF35249.1| conserved hypothetical protein [Ricinus communis] Length = 476 Score = 116 bits (291), Expect = 2e-24 Identities = 57/72 (79%), Positives = 63/72 (87%) Frame = -3 Query: 218 IDVNIGADLLGTMLTKEVLPLYDKELPYLLCDFGKDAEEFMVRGKIGIVFDEDAVNGEPV 39 +DVN+GADLLGTMLTKEVLPLYDKE+ YLLCD KDAE FMVRGKIGI+ DE A++G P Sbjct: 153 LDVNVGADLLGTMLTKEVLPLYDKEMEYLLCDMEKDAERFMVRGKIGIIKDEAAMSGGPG 212 Query: 38 PGRPVVETGTIL 3 GRPVVETGTIL Sbjct: 213 LGRPVVETGTIL 224 >ref|XP_003556168.1| PREDICTED: 30S ribosomal protein S1-like [Glycine max] Length = 366 Score = 114 bits (286), Expect = 6e-24 Identities = 55/72 (76%), Positives = 64/72 (88%) Frame = -3 Query: 218 IDVNIGADLLGTMLTKEVLPLYDKELPYLLCDFGKDAEEFMVRGKIGIVFDEDAVNGEPV 39 +DVN+GADLLGTMLTKEVLPLY KE+ LLCD KDAE+FMVRGK+GIV +E+A++G PV Sbjct: 45 LDVNVGADLLGTMLTKEVLPLYGKEMENLLCDVEKDAEDFMVRGKMGIVKNEEAISGVPV 104 Query: 38 PGRPVVETGTIL 3 PGRPVVE GTIL Sbjct: 105 PGRPVVEIGTIL 116 >ref|XP_003535559.1| PREDICTED: uncharacterized protein LOC100820145 [Glycine max] Length = 513 Score = 112 bits (279), Expect = 4e-23 Identities = 53/72 (73%), Positives = 63/72 (87%) Frame = -3 Query: 218 IDVNIGADLLGTMLTKEVLPLYDKELPYLLCDFGKDAEEFMVRGKIGIVFDEDAVNGEPV 39 +DVN+GADLLGTMLTKEVLPLY KE+ LLCD KDAE+FMV GK+GIV +E+A++G PV Sbjct: 192 LDVNVGADLLGTMLTKEVLPLYGKEMENLLCDVDKDAEDFMVNGKMGIVKNEEAISGVPV 251 Query: 38 PGRPVVETGTIL 3 PGRPV+E GTIL Sbjct: 252 PGRPVLEIGTIL 263 >ref|XP_002263508.2| PREDICTED: uncharacterized protein LOC100240915 [Vitis vinifera] Length = 513 Score = 109 bits (273), Expect = 2e-22 Identities = 52/72 (72%), Positives = 62/72 (86%) Frame = -3 Query: 218 IDVNIGADLLGTMLTKEVLPLYDKELPYLLCDFGKDAEEFMVRGKIGIVFDEDAVNGEPV 39 +DVN+GADLLGTMLTKEVLPLYDKE+ YLLCD KDAEEFMV GK+ IV ++DA++ P+ Sbjct: 186 LDVNVGADLLGTMLTKEVLPLYDKEMEYLLCDVEKDAEEFMVHGKMSIVRNDDALSRVPM 245 Query: 38 PGRPVVETGTIL 3 G PVVETGT+L Sbjct: 246 QGSPVVETGTVL 257 >emb|CBI29366.3| unnamed protein product [Vitis vinifera] Length = 435 Score = 109 bits (273), Expect = 2e-22 Identities = 52/72 (72%), Positives = 62/72 (86%) Frame = -3 Query: 218 IDVNIGADLLGTMLTKEVLPLYDKELPYLLCDFGKDAEEFMVRGKIGIVFDEDAVNGEPV 39 +DVN+GADLLGTMLTKEVLPLYDKE+ YLLCD KDAEEFMV GK+ IV ++DA++ P+ Sbjct: 108 LDVNVGADLLGTMLTKEVLPLYDKEMEYLLCDVEKDAEEFMVHGKMSIVRNDDALSRVPM 167 Query: 38 PGRPVVETGTIL 3 G PVVETGT+L Sbjct: 168 QGSPVVETGTVL 179