BLASTX nr result

ID: Coptis24_contig00013154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013154
         (795 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632315.1| PREDICTED: uncharacterized protein LOC100852...   188   1e-45
ref|XP_002278974.1| PREDICTED: uncharacterized protein LOC100257...   184   2e-44
emb|CBI26282.3| unnamed protein product [Vitis vinifera]              178   1e-42
ref|XP_002517105.1| lipid binding protein, putative [Ricinus com...   177   2e-42
ref|XP_002315761.1| predicted protein [Populus trichocarpa] gi|2...   171   1e-40

>ref|XP_003632315.1| PREDICTED: uncharacterized protein LOC100852532 [Vitis vinifera]
          Length = 214

 Score =  188 bits (477), Expect = 1e-45
 Identities = 100/215 (46%), Positives = 134/215 (62%), Gaps = 3/215 (1%)
 Frame = -2

Query: 728 MEATKWLGRENALLMMVLLISIMPSNSQITTPCTASMISSFTPCMNFITGSTANGSGLPT 549
           ME  K      A+   +L IS++ +N+QI+TPCT SMISSFTPC+NFITGST+     PT
Sbjct: 1   MEGLKAFQHMVAVYTTLLAISVISANAQISTPCTTSMISSFTPCLNFITGSTSGNGSSPT 60

Query: 548 SQCCGSVRTLLSSGIDCACLLLTANVPFQLPINRTLSISLPRACKVGGVPVQCKGSAAPL 369
           + CC S+R+L S+ +DCACL++T +VP QLPINRTL+ISLPRAC +G VP+QCK S  PL
Sbjct: 61  AGCCSSLRSLTSTTMDCACLIITGSVPLQLPINRTLAISLPRACNMGSVPIQCKASGTPL 120

Query: 368 XXXXXXXXXXXXXXXXXXXXXXXXPESTSPAL--APQSDTTDLIPTASSPADSNTP-VSI 198
                                    ++ +  L  AP+ +T   +  AS P DS TP  + 
Sbjct: 121 PAPGPVLLGPTLPPPAAAPLSPRASKAAAATLAPAPEPETAIELSPASPPVDSETPTTTT 180

Query: 197 PGRRPVVTPNAAAKTSHISSPYILFVLGVLVLNYY 93
           PG RPV+TP +A+  S+ISSP +L VLG++ L  Y
Sbjct: 181 PGIRPVLTP-SASNPSYISSPLLLIVLGIMFLKCY 214


>ref|XP_002278974.1| PREDICTED: uncharacterized protein LOC100257872 [Vitis vinifera]
          Length = 217

 Score =  184 bits (467), Expect = 2e-44
 Identities = 94/205 (45%), Positives = 128/205 (62%), Gaps = 6/205 (2%)
 Frame = -2

Query: 689 LMMVLLISIMPSNSQITTPCTASMISSFTPCMNFITGSTANGSGLPTSQCCGSVRTLLSS 510
           L + L++ IMP   QI+T C+ASMISSFTPC+NF+T S+ NG+  PT+ CC ++R+L S+
Sbjct: 14  LAIALMVVIMPVQGQISTSCSASMISSFTPCINFVTNSSGNGTS-PTADCCNALRSLTST 72

Query: 509 GIDCACLLLTANVPFQLPINRTLSISLPRACKVGGVPVQCKGSAAPLXXXXXXXXXXXXX 330
            +DC CL++T +VPFQ+PINRTL+ISLPRAC    VPVQCK + AP+             
Sbjct: 73  SMDCLCLIVTGSVPFQMPINRTLAISLPRACNTASVPVQCKATGAPVPAPGPAALGPTLS 132

Query: 329 XXXXXXXXXXXPE------STSPALAPQSDTTDLIPTASSPADSNTPVSIPGRRPVVTPN 168
                      P+      STSPALAP SDTT  +   S   DS+ P +  G RPV+TP+
Sbjct: 133 PQATPSPTGPSPKASSVPGSTSPALAPGSDTTPSLTPDSPTVDSDAPTTTTGSRPVLTPS 192

Query: 167 AAAKTSHISSPYILFVLGVLVLNYY 93
           A  +   +S   +LFVLG++ + YY
Sbjct: 193 AGNRPQSLSPSLVLFVLGIIFIMYY 217


>emb|CBI26282.3| unnamed protein product [Vitis vinifera]
          Length = 195

 Score =  178 bits (452), Expect = 1e-42
 Identities = 91/196 (46%), Positives = 122/196 (62%), Gaps = 6/196 (3%)
 Frame = -2

Query: 662 MPSNSQITTPCTASMISSFTPCMNFITGSTANGSGLPTSQCCGSVRTLLSSGIDCACLLL 483
           MP   QI+T C+ASMISSFTPC+NF+T S+ NG+  PT+ CC ++R+L S+ +DC CL++
Sbjct: 1   MPVQGQISTSCSASMISSFTPCINFVTNSSGNGTS-PTADCCNALRSLTSTSMDCLCLIV 59

Query: 482 TANVPFQLPINRTLSISLPRACKVGGVPVQCKGSAAPLXXXXXXXXXXXXXXXXXXXXXX 303
           T +VPFQ+PINRTL+ISLPRAC    VPVQCK + AP+                      
Sbjct: 60  TGSVPFQMPINRTLAISLPRACNTASVPVQCKATGAPVPAPGPAALGPTLSPQATPSPTG 119

Query: 302 XXPE------STSPALAPQSDTTDLIPTASSPADSNTPVSIPGRRPVVTPNAAAKTSHIS 141
             P+      STSPALAP SDTT  +   S   DS+ P +  G RPV+TP+A  +   +S
Sbjct: 120 PSPKASSVPGSTSPALAPGSDTTPSLTPDSPTVDSDAPTTTTGSRPVLTPSAGNRPQSLS 179

Query: 140 SPYILFVLGVLVLNYY 93
              +LFVLG++ + YY
Sbjct: 180 PSLVLFVLGIIFIMYY 195


>ref|XP_002517105.1| lipid binding protein, putative [Ricinus communis]
           gi|223543740|gb|EEF45268.1| lipid binding protein,
           putative [Ricinus communis]
          Length = 206

 Score =  177 bits (449), Expect = 2e-42
 Identities = 94/200 (47%), Positives = 123/200 (61%), Gaps = 1/200 (0%)
 Frame = -2

Query: 689 LMMVLLISIMPSNSQITTPCTASMISSFTPCMNFITGSTANGSGLPTSQCCGSVRTLLSS 510
           L + L+  I P++ QI TPCT S++S FTPCM+F+T STANG+  PTS CC S++ L  +
Sbjct: 14  LAVALIFLIFPAHGQINTPCTPSLLSVFTPCMSFLTNSTANGTS-PTSDCCSSLKNLTGN 72

Query: 509 GIDCACLLLTANVPFQLPINRTLSISLPRACKVGGVPVQCKGSAAPLXXXXXXXXXXXXX 330
           G+DC CL++T +VPFQ+PINRTL+ISLPRAC + GVPVQCKG   P              
Sbjct: 73  GMDCLCLIVTGSVPFQIPINRTLAISLPRACNMAGVPVQCKG---PASLGPTPSPRISPS 129

Query: 329 XXXXXXXXXXXPESTSPALAPQSDTTDLIPTASSPADSNTPVSIPGRRPVVTPNAAAKTS 150
                        STSP   P+S TT ++  +S   D+  P S  G RPV+TP +AA  S
Sbjct: 130 ASPKASVVPEPTPSTSP---PESSTTPVLTPSSPTVDTGAPTSTTGSRPVLTPPSAAIPS 186

Query: 149 HISSP-YILFVLGVLVLNYY 93
           +  SP  +LF +G LVL YY
Sbjct: 187 YSISPSVLLFAIGFLVLKYY 206


>ref|XP_002315761.1| predicted protein [Populus trichocarpa] gi|222864801|gb|EEF01932.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score =  171 bits (434), Expect = 1e-40
 Identities = 89/200 (44%), Positives = 121/200 (60%), Gaps = 1/200 (0%)
 Frame = -2

Query: 689 LMMVLLISIMPSNSQITTPCTASMISSFTPCMNFITGSTANGSGLPTSQCCGSVRTLLSS 510
           L + L + I+P   QI T CTAS++++FTPCMNF+T STA     PT+ CCG+++ L S+
Sbjct: 5   LAVALAVMILPVYGQINTACTASVLATFTPCMNFLTNSTAANGTSPTAGCCGALKNLTSN 64

Query: 509 GIDCACLLLTANVPFQLPINRTLSISLPRACKVGGVPVQCKGSAAPLXXXXXXXXXXXXX 330
           G+DC CL++T +VPF +PINRTL+ISLPRAC + GVPVQCK + +P+             
Sbjct: 65  GMDCFCLIVTGSVPFSIPINRTLAISLPRACNMPGVPVQCKATGSPI------------- 111

Query: 329 XXXXXXXXXXXPESTSPALAPQSDTTDLIPTASSPADSNTPVSIPGRRPVVTPNAAAKTS 150
                      PE T   L P SDTT L+   SS  D+  P S  G RPV+TP +A+  S
Sbjct: 112 ----PAPAPVVPEPTPSTLPPVSDTTPLLTPPSSTGDTGAPTSTTGSRPVLTPPSASAPS 167

Query: 149 HISSP-YILFVLGVLVLNYY 93
           H  SP  +LF +G ++   Y
Sbjct: 168 HSLSPSLLLFAVGFVLFKCY 187


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