BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013153
         (1455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26162.3| unnamed protein product [Vitis vinifera]              295   2e-77
ref|XP_003617724.1| Pentatricopeptide repeat-containing protein ...   266   1e-68
ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containi...   254   3e-65
ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containi...   254   3e-65
ref|NP_001050167.1| Os03g0363700 [Oryza sativa Japonica Group] g...   239   2e-60

>emb|CBI26162.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  295 bits (755), Expect = 2e-77
 Identities = 145/299 (48%), Positives = 191/299 (63%)
 Frame = +1

Query: 4    APTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGYAPHRVMYNTMIDGLCEMRQMPLAQK 183
            AP IFTYQE++ GLC    G E FRVF  LK++GYAP RVMY TMI GLC M+ +  A+K
Sbjct: 329  APDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARK 388

Query: 184  LWFEMLSKGFIPNEHTYNVFMHGCCKSGQFDMAWKLWKEMSDRGLRKNKFNYNTMIASFS 363
            LWFEM+ KGF+PNE+TYN  +HG  K G  + AWK+++EM D+G  +   +YN MI    
Sbjct: 389  LWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLC 448

Query: 364  LGGKLNEACALFEEMPKMEIKRDAVNYNSMIQGFCKIMQEKKAMKFYHDLIATGSQPSAA 543
              GK+ EA  LFEEM    I R+ + YN++++GFCK  +  +     ++L+  G QPSAA
Sbjct: 449  SHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAA 508

Query: 544  AYHSLILALCVTGEMQAALDLWKDMLHRNVEPWISTHDNIIMGFCKQGNTREGMSWLTRM 723
            +Y  LI  LC  G+MQ A  LW DM +R +EP + THD +I GFCKQG   EGM WLT M
Sbjct: 509  SYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTM 568

Query: 724  LEKNFRPLEKTFNEMIKCLISKNLRDDALLILCKMLRLGYELKEPHYYKFVDRLCSTNS 900
            L    RP +K+F  +I+CL   +  DDALL+L  ML++G+ L        V +LC  NS
Sbjct: 569  LRSKLRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIGFRLSISICNSLVTKLCEKNS 627



 Score =  123 bits (309), Expect = 1e-25
 Identities = 69/278 (24%), Positives = 134/278 (48%)
 Frame = +1

Query: 13   IFTYQEIIYGLCNNQMGAEAFRVFNALKEKGYAPHRVMYNTMIDGLCEMRQMPLAQKLWF 192
            + T   ++   C+    ++   +   + E G  P    +N +I G C+ +       L  
Sbjct: 262  VHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLH 321

Query: 193  EMLSKGFIPNEHTYNVFMHGCCKSGQFDMAWKLWKEMSDRGLRKNKFNYNTMIASFSLGG 372
             M+++   P+  TY   ++G CK G+    ++++K++ DRG   ++  Y TMI       
Sbjct: 322  SMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMK 381

Query: 373  KLNEACALFEEMPKMEIKRDAVNYNSMIQGFCKIMQEKKAMKFYHDLIATGSQPSAAAYH 552
             L +A  L+ EM +     +   YN+MI G+ KI   ++A K Y ++   G      +Y+
Sbjct: 382  WLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYN 441

Query: 553  SLILALCVTGEMQAALDLWKDMLHRNVEPWISTHDNIIMGFCKQGNTREGMSWLTRMLEK 732
             +I  LC  G+++ A DL+++M H+ +     T++ ++ GFCK+G   EG + L  +L++
Sbjct: 442  VMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQ 501

Query: 733  NFRPLEKTFNEMIKCLISKNLRDDALLILCKMLRLGYE 846
              +P   ++  +I  L  +    +A ++   M   G E
Sbjct: 502  GIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGME 539



 Score = 89.0 bits (219), Expect = 3e-15
 Identities = 56/264 (21%), Positives = 107/264 (40%)
 Frame = +1

Query: 115  HRVMYNTMIDGLCEMRQMPLAQKLWFEMLSKGFIPNEHTYNVFMHGCCKSGQFDMAWKLW 294
            H V Y  ++   C+  ++     L   +L  G +P    +N  + G CK   +     L 
Sbjct: 263  HTVGY--LVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLL 320

Query: 295  KEMSDRGLRKNKFNYNTMIASFSLGGKLNEACALFEEMPKMEIKRDAVNYNSMIQGFCKI 474
              M  R    + F Y  ++     GGK  E   +F+++       D V Y +MI G C++
Sbjct: 321  HSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRM 380

Query: 475  MQEKKAMKFYHDLIATGSQPSAAAYHSLILALCVTGEMQAALDLWKDMLHRNVEPWISTH 654
                 A K + ++I  G  P+   Y+++I      G ++ A  ++++M  +       ++
Sbjct: 381  KWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSY 440

Query: 655  DNIIMGFCKQGNTREGMSWLTRMLEKNFRPLEKTFNEMIKCLISKNLRDDALLILCKMLR 834
            + +I G C  G  +E       M  K       T+N +++    +    +   +L ++L 
Sbjct: 441  NVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLD 500

Query: 835  LGYELKEPHYYKFVDRLCSTNSDQ 906
             G +     Y   +D+LC     Q
Sbjct: 501  QGIQPSAASYAPLIDKLCQEGDMQ 524



 Score = 85.5 bits (210), Expect = 3e-14
 Identities = 57/248 (22%), Positives = 98/248 (39%)
 Frame = +1

Query: 43  LCNNQMGAEAFRVFNALKEKGYAPHRVMYNTMIDGLCEMRQMPLAQKLWFEMLSKGFIPN 222
           LC   +  EA  VF  LK  G       +N+++ G     ++    +L+ EM+    + +
Sbjct: 202 LCKGGLVEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVAD 261

Query: 223 EHTYNVFMHGCCKSGQFDMAWKLWKEMSDRGLRKNKFNYNTMIASFSLGGKLNEACALFE 402
            HT    +   C   +      L + + + G+      +N +I+ F           L  
Sbjct: 262 VHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLH 321

Query: 403 EMPKMEIKRDAVNYNSMIQGFCKIMQEKKAMKFYHDLIATGSQPSAAAYHSLILALCVTG 582
            M       D   Y  ++ G CK  +  +  + + DL   G  P    Y ++I  LC   
Sbjct: 322 SMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMK 381

Query: 583 EMQAALDLWKDMLHRNVEPWISTHDNIIMGFCKQGNTREGMSWLTRMLEKNFRPLEKTFN 762
            +  A  LW +M+ +   P   T++ +I G+ K GN  E       M +K +     ++N
Sbjct: 382 WLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYN 441

Query: 763 EMIKCLIS 786
            MIK L S
Sbjct: 442 VMIKGLCS 449



 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 62/284 (21%), Positives = 114/284 (40%)
 Frame = +1

Query: 40   GLCNNQMGAEAFRVFNALKEKGYAPHRVMYNTMIDGLCEMRQMPLAQKLWFEMLSKGFIP 219
            G CN    A++F     L    + P        I  LC+   +  A  ++ ++   G   
Sbjct: 174  GACN---AAKSF-----LDSTNFNPKPASLEAYIRCLCKGGLVEEAISVFGQLKGIGVCA 225

Query: 220  NEHTYNVFMHGCCKSGQFDMAWKLWKEMSDRGLRKNKFNYNTMIASFSLGGKLNEACALF 399
            +  T+N  + G  ++G+ D  W+L+ EM +  +  +      ++ +F    ++++   L 
Sbjct: 226  SIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTVGYLVQAFCDENRISDGHNLL 285

Query: 400  EEMPKMEIKRDAVNYNSMIQGFCKIMQEKKAMKFYHDLIATGSQPSAAAYHSLILALCVT 579
              + +  +      +N +I GFCK     +     H +IA    P    Y  ++  LC  
Sbjct: 286  RRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKG 345

Query: 580  GEMQAALDLWKDMLHRNVEPWISTHDNIIMGFCKQGNTREGMSWLTRMLEKNFRPLEKTF 759
            G+      ++KD+  R   P    +  +I G C+     +       M++K F P E T+
Sbjct: 346  GKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTY 405

Query: 760  NEMIKCLISKNLRDDALLILCKMLRLGYELKEPHYYKFVDRLCS 891
            N MI         ++A  +  +M   GY  K   Y   +  LCS
Sbjct: 406  NAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCS 449


>ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355519059|gb|AET00683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 861

 Score =  266 bits (679), Expect = 1e-68
 Identities = 134/309 (43%), Positives = 191/309 (61%)
 Frame = +1

Query: 1    CAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGYAPHRVMYNTMIDGLCEMRQMPLAQ 180
            C P+I+TYQEII GL   +   EAFRVFN LK++GY P RVMY T+I G C+M  +  A+
Sbjct: 267  CNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEAR 326

Query: 181  KLWFEMLSKGFIPNEHTYNVFMHGCCKSGQFDMAWKLWKEMSDRGLRKNKFNYNTMIASF 360
            KLWFEM+ KG +PNE+TYNV ++G CK   F  A KL+ +M  RG  +N  +Y+TMI+  
Sbjct: 327  KLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGL 386

Query: 361  SLGGKLNEACALFEEMPKMEIKRDAVNYNSMIQGFCKIMQEKKAMKFYHDLIATGSQPSA 540
             L GK +EA +LF EM +  I RD ++YNS+I+G C+  +  KA    + L+  G +PS 
Sbjct: 387  YLHGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSV 446

Query: 541  AAYHSLILALCVTGEMQAALDLWKDMLHRNVEPWISTHDNIIMGFCKQGNTREGMSWLTR 720
            +++  LI  LC  G+ + A+ L KDM  R++EP  STHD +I+G  K+G+  +GM WL +
Sbjct: 447  SSFTPLIKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMIIGLSKKGDFAQGMEWLLK 506

Query: 721  MLEKNFRPLEKTFNEMIKCLISKNLRDDALLILCKMLRLGYELKEPHYYKFVDRLCSTNS 900
            ML    +P  +TF  +I CL  +N  DD L++L  M R GY L++      V +    N 
Sbjct: 507  MLSWKLKPNMQTFEHLIDCLKRENRLDDILIVLDLMFREGYRLEKSRICSLVTKFSKKNF 566

Query: 901  DQAGLCQKD 927
                LC ++
Sbjct: 567  PFPHLCLEE 575



 Score =  123 bits (308), Expect = 1e-25
 Identities = 67/266 (25%), Positives = 131/266 (49%)
 Frame = +1

Query: 31   IIYGLCNNQMGAEAFRVFNALKEKGYAPHRVMYNTMIDGLCEMRQMPLAQKLWFEMLSKG 210
            +I   C        + +   + EKG      ++N +I+G C+ +Q     ++   M++  
Sbjct: 207  LIKAFCAENKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMK 266

Query: 211  FIPNEHTYNVFMHGCCKSGQFDMAWKLWKEMSDRGLRKNKFNYNTMIASFSLGGKLNEAC 390
              P+ +TY   ++G  K  + D A++++ ++ DRG   ++  Y T+I  F   G L EA 
Sbjct: 267  CNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEAR 326

Query: 391  ALFEEMPKMEIKRDAVNYNSMIQGFCKIMQEKKAMKFYHDLIATGSQPSAAAYHSLILAL 570
             L+ EM +  +  +   YN MI G+CK+    +A K Y D+   G   +  +Y ++I  L
Sbjct: 327  KLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGL 386

Query: 571  CVTGEMQAALDLWKDMLHRNVEPWISTHDNIIMGFCKQGNTREGMSWLTRMLEKNFRPLE 750
             + G+   AL L+ +M  + +   + +++++I G C++G   +  + L ++L +   P  
Sbjct: 387  YLHGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSV 446

Query: 751  KTFNEMIKCLISKNLRDDALLILCKM 828
             +F  +IKCL      + A+ +L  M
Sbjct: 447  SSFTPLIKCLCKVGDTEGAMRLLKDM 472



 Score = 87.4 bits (215), Expect = 8e-15
 Identities = 70/296 (23%), Positives = 123/296 (41%), Gaps = 2/296 (0%)
 Frame = +1

Query: 43  LCNNQMGAEAFRVFNALKEKGYAPHRVMYNTMIDGLCEMRQMPLAQKLWFEMLSKGFIPN 222
           L  N M  E F VF +LK+ G+ P    +N  +    ++ +  L  KL+  M+  G   N
Sbjct: 139 LGENGMVEEVFDVFVSLKKVGFLPSASSFNVCLLACLKVGRTDLVWKLYELMIESGVGVN 198

Query: 223 --EHTYNVFMHGCCKSGQFDMAWKLWKEMSDRGLRKNKFNYNTMIASFSLGGKLNEACAL 396
               T    +   C   +    ++L +++ ++GL  +   +N +I  F    + +    +
Sbjct: 199 IDVETVGCLIKAFCAENKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEI 258

Query: 397 FEEMPKMEIKRDAVNYNSMIQGFCKIMQEKKAMKFYHDLIATGSQPSAAAYHSLILALCV 576
              M  M+       Y  +I G  K  +  +A + ++DL   G  P    Y ++I   C 
Sbjct: 259 LHIMIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCD 318

Query: 577 TGEMQAALDLWKDMLHRNVEPWISTHDNIIMGFCKQGNTREGMSWLTRMLEKNFRPLEKT 756
            G +  A  LW +M+ + + P   T++ +I G+CK  +  E       M  + +     +
Sbjct: 319 MGLLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVS 378

Query: 757 FNEMIKCLISKNLRDDALLILCKMLRLGYELKEPHYYKFVDRLCSTNSDQAGLCQK 924
           ++ MI  L      D+AL +  +M R G              L S NS   GLCQ+
Sbjct: 379 YSTMISGLYLHGKTDEALSLFHEMSRKG----------IARDLISYNSLIKGLCQE 424


>ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18950-like
            [Cucumis sativus]
          Length = 638

 Score =  254 bits (650), Expect = 3e-65
 Identities = 122/259 (47%), Positives = 168/259 (64%)
 Frame = +1

Query: 7    PTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGYAPHRVMYNTMIDGLCEMRQMPLAQKL 186
            P IFTYQEII G C N M  +AF VFNALK++GYAP  VMY T+I G C+M Q+  A KL
Sbjct: 331  PDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKL 390

Query: 187  WFEMLSKGFIPNEHTYNVFMHGCCKSGQFDMAWKLWKEMSDRGLRKNKFNYNTMIASFSL 366
            WFEM+ KGF+PNE++YN  ++G CK G  D A KL+K+M D G ++   + NT+I    L
Sbjct: 391  WFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCL 450

Query: 367  GGKLNEACALFEEMPKMEIKRDAVNYNSMIQGFCKIMQEKKAMKFYHDLIATGSQPSAAA 546
             G+ +EA   F EMP   I  D + YN++IQGFC+  +  ++     +L A G QPS ++
Sbjct: 451  HGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSS 510

Query: 547  YHSLILALCVTGEMQAALDLWKDMLHRNVEPWISTHDNIIMGFCKQGNTREGMSWLTRML 726
            Y  LI  LC  G +Q A ++W DM +R ++P + T D+II G C+QG   EGM WL  ML
Sbjct: 511  YAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITML 570

Query: 727  EKNFRPLEKTFNEMIKCLI 783
            + N +P ++TF ++I+ LI
Sbjct: 571  KSNLKPQKETFYKLIQSLI 589



 Score =  126 bits (316), Expect = 2e-26
 Identities = 70/256 (27%), Positives = 127/256 (49%)
 Frame = +1

Query: 13   IFTYQEIIYGLCNNQMGAEAFRVFNALKEKGYAPHRVMYNTMIDGLCEMRQMPLAQKLWF 192
            I T   +I   CN+   + A+ +     E G  P    +N +I G C+ +      +L  
Sbjct: 263  IETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVH 322

Query: 193  EMLSKGFIPNEHTYNVFMHGCCKSGQFDMAWKLWKEMSDRGLRKNKFNYNTMIASFSLGG 372
             M+ K   P+  TY   ++G CK+     A++++  + DRG   +   Y T+I  F   G
Sbjct: 323  TMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMG 382

Query: 373  KLNEACALFEEMPKMEIKRDAVNYNSMIQGFCKIMQEKKAMKFYHDLIATGSQPSAAAYH 552
            +L +A  L+ EM       +  +YN++I GFCKI    +AMK Y  ++ +G + +  + +
Sbjct: 383  QLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCN 442

Query: 553  SLILALCVTGEMQAALDLWKDMLHRNVEPWISTHDNIIMGFCKQGNTREGMSWLTRMLEK 732
            +LIL LC+ G    A D +++M  +N+   + T++ +I GFC++G   +    L  +  K
Sbjct: 443  TLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAK 502

Query: 733  NFRPLEKTFNEMIKCL 780
              +P   ++  +I+ L
Sbjct: 503  GLQPSTSSYAHLIQKL 518



 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 65/270 (24%), Positives = 113/270 (41%), Gaps = 2/270 (0%)
 Frame = +1

Query: 4   APTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGYAPHRVMYNTMIDGLCEMRQMPLAQK 183
           +P   + +  I  +C   +  EA   F+ LKE GY P+   +N       +  +  L  K
Sbjct: 188 SPEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWK 247

Query: 184 LWFEMLSKGFIPNE--HTYNVFMHGCCKSGQFDMAWKLWKEMSDRGLRKNKFNYNTMIAS 357
           L+  M+  G   +    T    +   C   +   A+++ ++  + GL      +N +I+ 
Sbjct: 248 LYEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISG 307

Query: 358 FSLGGKLNEACALFEEMPKMEIKRDAVNYNSMIQGFCKIMQEKKAMKFYHDLIATGSQPS 537
           F      +    L   M       D   Y  +I GFCK     +A + ++ L   G  P 
Sbjct: 308 FCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPD 367

Query: 538 AAAYHSLILALCVTGEMQAALDLWKDMLHRNVEPWISTHDNIIMGFCKQGNTREGMSWLT 717
              Y +LI   C  G+++ A  LW +M+ +   P   +++ +I GFCK GN  E M    
Sbjct: 368 MVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYK 427

Query: 718 RMLEKNFRPLEKTFNEMIKCLISKNLRDDA 807
           +ML+  ++    + N +I  L      D+A
Sbjct: 428 KMLDSGYKETTLSCNTLILGLCLHGRTDEA 457


>ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18950-like
            [Cucumis sativus]
          Length = 602

 Score =  254 bits (650), Expect = 3e-65
 Identities = 122/259 (47%), Positives = 168/259 (64%)
 Frame = +1

Query: 7    PTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGYAPHRVMYNTMIDGLCEMRQMPLAQKL 186
            P IFTYQEII G C N M  +AF VFNALK++GYAP  VMY T+I G C+M Q+  A KL
Sbjct: 295  PDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKL 354

Query: 187  WFEMLSKGFIPNEHTYNVFMHGCCKSGQFDMAWKLWKEMSDRGLRKNKFNYNTMIASFSL 366
            WFEM+ KGF+PNE++YN  ++G CK G  D A KL+K+M D G ++   + NT+I    L
Sbjct: 355  WFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCL 414

Query: 367  GGKLNEACALFEEMPKMEIKRDAVNYNSMIQGFCKIMQEKKAMKFYHDLIATGSQPSAAA 546
             G+ +EA   F EMP   I  D + YN++IQGFC+  +  ++     +L A G QPS ++
Sbjct: 415  HGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSS 474

Query: 547  YHSLILALCVTGEMQAALDLWKDMLHRNVEPWISTHDNIIMGFCKQGNTREGMSWLTRML 726
            Y  LI  LC  G +Q A ++W DM +R ++P + T D+II G C+QG   EGM WL  ML
Sbjct: 475  YAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITML 534

Query: 727  EKNFRPLEKTFNEMIKCLI 783
            + N +P ++TF ++I+ LI
Sbjct: 535  KSNLKPQKETFYKLIQSLI 553



 Score =  126 bits (316), Expect = 2e-26
 Identities = 70/256 (27%), Positives = 127/256 (49%)
 Frame = +1

Query: 13  IFTYQEIIYGLCNNQMGAEAFRVFNALKEKGYAPHRVMYNTMIDGLCEMRQMPLAQKLWF 192
           I T   +I   CN+   + A+ +     E G  P    +N +I G C+ +      +L  
Sbjct: 227 IETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVH 286

Query: 193 EMLSKGFIPNEHTYNVFMHGCCKSGQFDMAWKLWKEMSDRGLRKNKFNYNTMIASFSLGG 372
            M+ K   P+  TY   ++G CK+     A++++  + DRG   +   Y T+I  F   G
Sbjct: 287 TMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMG 346

Query: 373 KLNEACALFEEMPKMEIKRDAVNYNSMIQGFCKIMQEKKAMKFYHDLIATGSQPSAAAYH 552
           +L +A  L+ EM       +  +YN++I GFCKI    +AMK Y  ++ +G + +  + +
Sbjct: 347 QLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCN 406

Query: 553 SLILALCVTGEMQAALDLWKDMLHRNVEPWISTHDNIIMGFCKQGNTREGMSWLTRMLEK 732
           +LIL LC+ G    A D +++M  +N+   + T++ +I GFC++G   +    L  +  K
Sbjct: 407 TLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAK 466

Query: 733 NFRPLEKTFNEMIKCL 780
             +P   ++  +I+ L
Sbjct: 467 GLQPSTSSYAHLIQKL 482



 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 65/270 (24%), Positives = 113/270 (41%), Gaps = 2/270 (0%)
 Frame = +1

Query: 4   APTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGYAPHRVMYNTMIDGLCEMRQMPLAQK 183
           +P   + +  I  +C   +  EA   F+ LKE GY P+   +N       +  +  L  K
Sbjct: 152 SPEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWK 211

Query: 184 LWFEMLSKGFIPNE--HTYNVFMHGCCKSGQFDMAWKLWKEMSDRGLRKNKFNYNTMIAS 357
           L+  M+  G   +    T    +   C   +   A+++ ++  + GL      +N +I+ 
Sbjct: 212 LYEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISG 271

Query: 358 FSLGGKLNEACALFEEMPKMEIKRDAVNYNSMIQGFCKIMQEKKAMKFYHDLIATGSQPS 537
           F      +    L   M       D   Y  +I GFCK     +A + ++ L   G  P 
Sbjct: 272 FCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPD 331

Query: 538 AAAYHSLILALCVTGEMQAALDLWKDMLHRNVEPWISTHDNIIMGFCKQGNTREGMSWLT 717
              Y +LI   C  G+++ A  LW +M+ +   P   +++ +I GFCK GN  E M    
Sbjct: 332 MVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYK 391

Query: 718 RMLEKNFRPLEKTFNEMIKCLISKNLRDDA 807
           +ML+  ++    + N +I  L      D+A
Sbjct: 392 KMLDSGYKETTLSCNTLILGLCLHGRTDEA 421


>ref|NP_001050167.1| Os03g0363700 [Oryza sativa Japonica Group]
            gi|108708311|gb|ABF96106.1| pentatricopeptide, putative
            [Oryza sativa Japonica Group]
            gi|113548638|dbj|BAF12081.1| Os03g0363700 [Oryza sativa
            Japonica Group]
          Length = 564

 Score =  239 bits (609), Expect = 2e-60
 Identities = 119/295 (40%), Positives = 184/295 (62%)
 Frame = +1

Query: 7    PTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGYAPHRVMYNTMIDGLCEMRQMPLAQKL 186
            P    YQ II+GL  ++MG+EA RVFN +K +GY    V Y T IDGLC+M  +  A+++
Sbjct: 253  PDTVIYQRIIHGLFAHKMGSEALRVFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDEARQI 312

Query: 187  WFEMLSKGFIPNEHTYNVFMHGCCKSGQFDMAWKLWKEMSDRGLRKNKFNYNTMIASFSL 366
            W EM+ KG  PNE+ Y   +   CK+G F+MA K++ EM  +GL+++  + N ++  F  
Sbjct: 313  WNEMVDKGMEPNEYAYCSLVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCT 372

Query: 367  GGKLNEACALFEEMPKMEIKRDAVNYNSMIQGFCKIMQEKKAMKFYHDLIATGSQPSAAA 546
             G+++EA  +FEEM K  I+ D + YN +IQG CK  +  +A++ Y  L+++G +PS + 
Sbjct: 373  HGRVDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVST 432

Query: 547  YHSLILALCVTGEMQAALDLWKDMLHRNVEPWISTHDNIIMGFCKQGNTREGMSWLTRML 726
            +  LI  +C  G++ AA++L K M  + +EP    +D+II GFCK     +GM+WL  ML
Sbjct: 433  FTPLIDTMCEEGQVDAAVELLKVMHAKGLEPLARINDSIINGFCKARRPEDGMAWLAGML 492

Query: 727  EKNFRPLEKTFNEMIKCLISKNLRDDALLILCKMLRLGYELKEPHYYKFVDRLCS 891
            +KN +P E TFN +++ L S    DDALL+L  M ++G+EL        V++LC+
Sbjct: 493  KKNLKPREHTFNSLVELLSSSGRVDDALLVLNTMFKIGHELGSLACTMLVEQLCT 547



 Score = 89.0 bits (219), Expect = 3e-15
 Identities = 54/240 (22%), Positives = 106/240 (44%)
 Frame = +1

Query: 196 MLSKGFIPNEHTYNVFMHGCCKSGQFDMAWKLWKEMSDRGLRKNKFNYNTMIASFSLGGK 375
           M++ G +P+   Y   +HG         A +++ E+  RG   +   Y T I      G 
Sbjct: 246 MIAAGSVPDTVIYQRIIHGLFAHKMGSEALRVFNEIKLRGYNVDAVTYTTAIDGLCKMGC 305

Query: 376 LNEACALFEEMPKMEIKRDAVNYNSMIQGFCKIMQEKKAMKFYHDLIATGSQPSAAAYHS 555
           ++EA  ++ EM    ++ +   Y S++  +CK    + A K Y +++  G + S  + + 
Sbjct: 306 IDEARQIWNEMVDKGMEPNEYAYCSLVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNI 365

Query: 556 LILALCVTGEMQAALDLWKDMLHRNVEPWISTHDNIIMGFCKQGNTREGMSWLTRMLEKN 735
           L+   C  G +  AL ++++M+ + +E  + T++ +I G CK G   E +    ++L   
Sbjct: 366 LVTGFCTHGRVDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSG 425

Query: 736 FRPLEKTFNEMIKCLISKNLRDDALLILCKMLRLGYELKEPHYYKFVDRLCSTNSDQAGL 915
             P   TF  +I  +  +   D A+ +L  M   G E         ++  C     + G+
Sbjct: 426 LEPSVSTFTPLIDTMCEEGQVDAAVELLKVMHAKGLEPLARINDSIINGFCKARRPEDGM 485



 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 46/229 (20%), Positives = 90/229 (39%)
 Frame = +1

Query: 202 SKGFIPNEHTYNVFMHGCCKSGQFDMAWKLWKEMSDRGLRKNKFNYNTMIASFSLGGKLN 381
           S  F  +  T    +  C   G+     +L ++ + RG+         ++A+FS      
Sbjct: 178 SPDFPGDAATVAFLVRACSAEGRPLDGLRLLRDGARRGVPPQLDAVADLVAAFSAAANFG 237

Query: 382 EACALFEEMPKMEIKRDAVNYNSMIQGFCKIMQEKKAMKFYHDLIATGSQPSAAAYHSLI 561
           +       M       D V Y  +I G        +A++ ++++   G    A  Y + I
Sbjct: 238 KVSETLHLMIAAGSVPDTVIYQRIIHGLFAHKMGSEALRVFNEIKLRGYNVDAVTYTTAI 297

Query: 562 LALCVTGEMQAALDLWKDMLHRNVEPWISTHDNIIMGFCKQGNTREGMSWLTRMLEKNFR 741
             LC  G +  A  +W +M+ + +EP    + +++  +CK G+          ML K  +
Sbjct: 298 DGLCKMGCIDEARQIWNEMVDKGMEPNEYAYCSLVAYYCKAGDFEMARKVYDEMLGKGLK 357

Query: 742 PLEKTFNEMIKCLISKNLRDDALLILCKMLRLGYELKEPHYYKFVDRLC 888
               + N ++    +    D+AL +  +M++ G E     Y   +  LC
Sbjct: 358 ESTVSCNILVTGFCTHGRVDEALGMFEEMVKKGIEHDVITYNILIQGLC 406