BLASTX nr result

ID: Coptis24_contig00013141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013141
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513136.1| serine-threonine protein kinase, plant-type,...    45   7e-06

>ref|XP_002513136.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223548147|gb|EEF49639.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 592

 Score = 45.1 bits (105), Expect(2) = 7e-06
 Identities = 20/36 (55%), Positives = 26/36 (72%)
 Frame = -3

Query: 194 SLFGDSLLRHASFKANKLYGLIPNVSPFNIFPVSAY 87
           +L G   L+HA+F+AN+L G IP   P+NIFP SAY
Sbjct: 534 TLLGIKSLKHANFRANRLCGEIPQRRPYNIFPASAY 569



 Score = 29.6 bits (65), Expect(2) = 7e-06
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -1

Query: 85  HDQCLCGKPMSTFRGR 38
           H+QCLCGKP+   RG+
Sbjct: 571 HNQCLCGKPLPPCRGK 586


Top