BLASTX nr result
ID: Coptis24_contig00013122
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013122 (1528 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2... 646 0.0 ref|XP_004148391.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 622 e-176 ref|XP_002324218.1| predicted protein [Populus trichocarpa] gi|2... 621 e-175 dbj|BAJ94465.1| predicted protein [Hordeum vulgare subsp. vulgar... 616 e-174 ref|XP_004162977.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 615 e-174 >ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera] Length = 564 Score = 646 bits (1666), Expect = 0.0 Identities = 326/496 (65%), Positives = 375/496 (75%), Gaps = 5/496 (1%) Frame = +3 Query: 54 GKLSQKVISLAAGEAHTLALTGDGCVYSWGRGTFGRLGTGKEDDELFPVRVEFDKAQGDR 233 G L K++S+AAGEAH+L LTGDG VYSWGRGTFGRLGTG E DELFPV ++FD A+ Sbjct: 11 GNLRGKIVSVAAGEAHSLVLTGDGRVYSWGRGTFGRLGTGSEADELFPVPIKFDSAEKSD 70 Query: 234 PK---FVEIAAGAYHSLALQDDGAIWCWGYNIYGQLGFNLENSLVPRFLEGFLELGSPDS 404 K FV IAAGAYHS+AL DDG +WCWGYN + +N LVP LE FL LGS S Sbjct: 71 SKGVKFVGIAAGAYHSVALADDGTVWCWGYN---SCILSDDNCLVPHLLELFLGLGSLGS 127 Query: 405 LRDESSIDSKKPLKVCSVKAGGMMSLAIDSLGALWIWGNYPPQNHSGDGEFSHISSSAPL 584 L DES +K PLKV +VKAGGMMSLAID+LG LW+WGN P ++ GEFS +SS P+ Sbjct: 128 LTDESDTKNKTPLKVNAVKAGGMMSLAIDNLGGLWMWGNVP-ESSPDKGEFSLVSSFTPI 186 Query: 585 PVWEFHGHTVVKVACGNEHVVALVSAEETFTGGDLICYSWGNNNHRQLGLGDRENRLRPE 764 PVW+FHGHTVVKVACGNEHVVALVS ET+ GGDLICYSWGNN H QLGLGD ENRLRPE Sbjct: 187 PVWDFHGHTVVKVACGNEHVVALVSHGETYKGGDLICYSWGNNGHGQLGLGDTENRLRPE 246 Query: 765 IVKTFNRECPWEVYEVACGAFHTAVLTRKKIHGNMIDSSHLESLELGEKESICWTFGLGD 944 +VKTFN E WEVYEVACGAFHTA+LT KK + + ES+CWTFGLGD Sbjct: 247 VVKTFNLESLWEVYEVACGAFHTALLTHKKRPSDTL-------------ESMCWTFGLGD 293 Query: 945 NGQLGHGTTNSTYLPEPVKDLPPDVFLISVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPD 1124 NGQLGHGTT LPEPVKDLP FL+SVDCGLFHTSVVSSAG+VWSWGMEKGLGLCPD Sbjct: 294 NGQLGHGTTKGISLPEPVKDLPEHRFLVSVDCGLFHTSVVSSAGEVWSWGMEKGLGLCPD 353 Query: 1125 ASFTGTDAGDALSPLWIPCNEYGSKFVDPLQVVCGAAHTIIVAHSGYGLWAWGRGRSGAL 1304 ASFTGTD GDA SPL YGSKF DP+QV CGAAHT++VA GY LW+WGRGRSG L Sbjct: 354 ASFTGTDPGDAPSPLL-----YGSKFRDPVQVACGAAHTVLVADDGYKLWSWGRGRSGVL 408 Query: 1305 GSGNTADSYAPCSVMWPPLDEDFQDALE--IVGEEARIQDEEPRRLAEIDKKLSLAMEEI 1478 G+G T D +AP +V+WPPL EDF++ LE E +I++++P + E++K+LSLA EE+ Sbjct: 409 GNGKTVDCFAPSTVLWPPLTEDFKE-LESGTTSGEKKIENKDPEEVTEMEKRLSLATEEM 467 Query: 1479 *HLRSKLTLTERYVSI 1526 L SKL+ ERY SI Sbjct: 468 KLLHSKLSTMERYASI 483 >ref|XP_004148391.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus] Length = 571 Score = 622 bits (1605), Expect = e-176 Identities = 302/493 (61%), Positives = 369/493 (74%), Gaps = 3/493 (0%) Frame = +3 Query: 54 GKLSQKVISLAAGEAHTLALTGDGCVYSWGRGTFGRLGTGKEDDELFPVRVEFDKAQGDR 233 GKLS KV++++AGEAHTL LTGDG VYSWGRG FGRLGTG E DELFPVRV+ + + Sbjct: 11 GKLSGKVVAISAGEAHTLVLTGDGRVYSWGRGMFGRLGTGAESDELFPVRVKLGSGE-EN 69 Query: 234 PKFVEIAAGAYHSLALQDDGAIWCWGYNIYGQLGFNLENSLVPRFLEGFLELGSPDSLRD 413 K V IAAG+YHSLAL DDG++WCWGYNIYGQLGF+ NS P L+ FLEL P+SL + Sbjct: 70 LKVVAIAAGSYHSLALTDDGSVWCWGYNIYGQLGFDGGNSATPCLLKQFLELEPPESLTE 129 Query: 414 ESSIDSKKPLKVCSVKAGGMMSLAIDSLGALWIWGNYPPQNHSGDGEFSHISSSAPLPVW 593 ES SK LK+C +KAGG +S AID LGALW+WGN P + + S++SS P PVW Sbjct: 130 ESGSKSKGSLKICDIKAGGQISFAIDDLGALWMWGNCPKPSGENEVGLSYVSSFTPSPVW 189 Query: 594 EFHGHTVVKVACGNEHVVALVSAEETFT-GGDLICYSWGNNNHRQLGLGDRENRLRPEIV 770 EFHGHTVVKVACGNEH+VALVS ET+ DL+CYSWG+N+H QLGLGD+++R P+I+ Sbjct: 190 EFHGHTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDSRACPQII 249 Query: 771 KTFNRECPWEVYEVACGAFHTAVLTRKKIHGNMIDSSHLESLELGEKESICWTFGLGDNG 950 +TFN PW VYEVACGAFHTA+L+ K + + ES+CWTFGLG+NG Sbjct: 250 ETFNEASPWAVYEVACGAFHTALLSHSKRPCDTL-------------ESVCWTFGLGENG 296 Query: 951 QLGHGTTNSTYLPEPVKDLPPDVFLISVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPDAS 1130 QLGHGTT + +LP+PVK+LP V LISV CGLFHTSVVSS GD+WSWGME+GLGLCPDAS Sbjct: 297 QLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLWSWGMERGLGLCPDAS 356 Query: 1131 FTGTDAGDALSPLWIPCNEYGS-KFVDPLQVVCGAAHTIIVAHSGYGLWAWGRGRSGALG 1307 FTGT+ GDA+SPL I C+ S KF+DP+QV CGAAHT+IVAH GY LW+WGRGRSG LG Sbjct: 357 FTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLG 416 Query: 1308 SGNTADSYAPCSVMWPPLDEDF-QDALEIVGEEARIQDEEPRRLAEIDKKLSLAMEEI*H 1484 +G D + P V+WPPL+EDF Q+ E EE ++++ + + E +KKL +AMEEI Sbjct: 417 NGKAVDCFTPTVVLWPPLNEDFDQEETETKCEEDKVEENKIEEVTEENKKLLMAMEEIKL 476 Query: 1485 LRSKLTLTERYVS 1523 L KL++ ERY S Sbjct: 477 LLDKLSIMERYAS 489 >ref|XP_002324218.1| predicted protein [Populus trichocarpa] gi|222865652|gb|EEF02783.1| predicted protein [Populus trichocarpa] Length = 561 Score = 621 bits (1602), Expect = e-175 Identities = 309/488 (63%), Positives = 366/488 (75%), Gaps = 2/488 (0%) Frame = +3 Query: 60 LSQKVISLAAGEAHTLALTGDGCVYSWGRGTFGRLGTGKEDDELFPVRVEFDKAQGDRPK 239 LS KV+S+A GEAH+L LTGDG VYSWG+G FGRLGTG E DELFPV+V+F+ R Sbjct: 7 LSGKVVSVATGEAHSLILTGDGRVYSWGKGMFGRLGTGSEVDELFPVQVKFETCVEKRLN 66 Query: 240 FVEIAAGAYHSLALQDDGAIWCWGYNIYGQLGFNLENSLVPRFLEGFLELGSPDSLRDES 419 FV +AAGAYHSLAL DDG++WCWGYNIYGQLG + EN +P ++ FLELGS SL D S Sbjct: 67 FVGVAAGAYHSLALADDGSVWCWGYNIYGQLGVSGENYSMPHLMDQFLELGSLGSLIDHS 126 Query: 420 SIDSKKPLKVCSVKAGGMMSLAIDSLGALWIWGNYPPQNHSGDGEFSHISSSAPLPVWEF 599 S+ PLK+CS+KAGGMMSLAID GALW+WGN P Q + S SS P+PV +F Sbjct: 127 ETKSEGPLKICSIKAGGMMSLAIDDHGALWMWGNCPQQRNKTGSSISFESSFIPIPVRDF 186 Query: 600 HGHTVVKVACGNEHVVALVSAEETFTGGDLICYSWGNNNHRQLGLGDRENRLRPEIVKTF 779 HGH+VVKVACG+EHVVALVSA ET+ DL+CYSWGNNNH QLGLGDRE+R+ PEIV+ F Sbjct: 187 HGHSVVKVACGSEHVVALVSAGETYKVEDLVCYSWGNNNHGQLGLGDRESRVHPEIVEMF 246 Query: 780 NRECPWEVYEVACGAFHTAVLTRKKIHGNMIDSSHLESLELGEKESICWTFGLGDNGQLG 959 N++ W+VYEVACGA+HTA+LTRK+ + ES+CWTFGLGDNGQLG Sbjct: 247 NKDSSWDVYEVACGAYHTALLTRKR-------------RTVDPLESVCWTFGLGDNGQLG 293 Query: 960 HGTTNSTYLPEPVKDLPPDVFLISVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPDASFTG 1139 HGTT S PEPVK+LP LISVDCGLFHTSVVSS GDVWSWGMEKGLGLCPDASFTG Sbjct: 294 HGTTQSVLKPEPVKELPGQAHLISVDCGLFHTSVVSSVGDVWSWGMEKGLGLCPDASFTG 353 Query: 1140 TDAGDALSPLWIP-CNEYGSKFVDPLQVVCGAAHTIIVAHSGYGLWAWGRGRSGALGSGN 1316 TDAGDA SPL + G F +P+QV CGAAHT++VA+ GY LW+WGRG SG LG+G Sbjct: 354 TDAGDAASPLLMSGYGVDGPIFHNPIQVACGAAHTVLVANDGYKLWSWGRGTSGVLGNGK 413 Query: 1317 TADSYAPCSVMWPPLDEDF-QDALEIVGEEARIQDEEPRRLAEIDKKLSLAMEEI*HLRS 1493 T + +AP V+WPPL EDF Q + VGEE+ + +AE DK+LSLAMEEI L+S Sbjct: 414 TINCFAPSFVLWPPLTEDFKQPEPKTVGEES----NGSKAVAETDKRLSLAMEEIELLQS 469 Query: 1494 KLTLTERY 1517 KL++ E+Y Sbjct: 470 KLSIMEQY 477 >dbj|BAJ94465.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326532960|dbj|BAJ89325.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 566 Score = 616 bits (1588), Expect = e-174 Identities = 310/494 (62%), Positives = 366/494 (74%), Gaps = 8/494 (1%) Frame = +3 Query: 69 KVISLAAGEAHTLALTGDGCVYSWGRGTFGRLGTGKEDDELFPVRV----EFDKAQGDRP 236 KV ++AAGEAHTLALTGDG VYSWGRGTFGRLGTG+E D P V A RP Sbjct: 4 KVSAVAAGEAHTLALTGDGEVYSWGRGTFGRLGTGREADVHVPTAVLPAVAAAAAGRPRP 63 Query: 237 KFVEIAAGAYHSLALQDDGAIWCWGYNIYGQLGFNLENSLVPRFLEGFLELGSPDSLRDE 416 +FV +AAGAYHSLAL D+G++W WGYNIYGQLG+ ENSL P ++GF +LGSP++L+DE Sbjct: 64 RFVAVAAGAYHSLALDDEGSLWSWGYNIYGQLGYGEENSLSPCLVDGFQDLGSPETLQDE 123 Query: 417 SSID-SKKPLKVCSVKAGGMMSLAIDSLGALWIWGNYPPQNHSGDGEFSHISSSAPLPVW 593 + ++ PLK+ SVKAGGMMS AIDSLGALW+WGN P Q + DGEF ++SAPLPVW Sbjct: 124 AQDTLARTPLKLSSVKAGGMMSFAIDSLGALWMWGNCPQQ--TDDGEFYIAATSAPLPVW 181 Query: 594 EFHGHTVVKVACGNEHVVALVSAEETFTGGDLICYSWGNNNHRQLGLGDRENRLRPEIVK 773 +FHGHTVVKVACGNEHVVA VSA ET+TGGDL+CYSWGNNNH QLGLGD+E+R RP ++ Sbjct: 182 DFHGHTVVKVACGNEHVVAAVSAGETYTGGDLVCYSWGNNNHGQLGLGDKESRSRPMLIP 241 Query: 774 TFNRECPWEVYEVACGAFHTAVLTRKKIHGNMIDSSHLESLELGEKESICWTFGLGDNGQ 953 F WEVYE+ACGA+HTAVLT KK + ES CWTFG+GDNGQ Sbjct: 242 EFGEGSSWEVYEIACGAWHTAVLTNKKSFDQ-------------DLESRCWTFGIGDNGQ 288 Query: 954 LGHGTTNSTYLPEPVKDLPPDVFLISVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPDASF 1133 LGHGTT +T P+PV LP FLIS+DCGLFHT+VVSS G+VW WGME+GLGLCPDASF Sbjct: 289 LGHGTTATTCSPQPVDGLPTGSFLISLDCGLFHTAVVSSDGEVWCWGMERGLGLCPDASF 348 Query: 1134 TGTDAGDALSPLWIPCNE-YGSKFVDPLQVVCGAAHTIIVAHSGYGLWAWGRGRSGALGS 1310 +G DAGDAL P+ + E G KF+ P+QV CGAAHT++VA GY +WAWGRGRSG LG Sbjct: 349 SGMDAGDALHPIRVQSPETNGFKFLGPVQVACGAAHTVLVAGDGYRMWAWGRGRSGVLGR 408 Query: 1311 GNTADSYAPCSVMWPPLDEDFQDALEIVGEEARIQDE--EPRRLAEIDKKLSLAMEEI*H 1484 T DSY PC VMWPPLDE+FQ EI G++A+ R E++ KLS A EE+ Sbjct: 409 DQTTDSYTPCVVMWPPLDENFQ---EIHGDQAQASTSRANDRTNTELELKLSAASEELQF 465 Query: 1485 LRSKLTLTERYVSI 1526 LRSKLTL ERY +I Sbjct: 466 LRSKLTLMERYANI 479 >ref|XP_004162977.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus] Length = 581 Score = 615 bits (1587), Expect = e-174 Identities = 303/503 (60%), Positives = 371/503 (73%), Gaps = 13/503 (2%) Frame = +3 Query: 54 GKLSQKVISLAAGEAHTLALTGDGCVYSWGRGTFGRLGTGKEDDELFPVRVEFDKAQGDR 233 GKLS KV++++AGEAHTL LTGDG VYSWGRG FGRLGTG E DELFPVRV+ + + Sbjct: 11 GKLSGKVVAISAGEAHTLVLTGDGRVYSWGRGMFGRLGTGAESDELFPVRVKLGSGE-EN 69 Query: 234 PKFVEIAAGAYHSLALQDDGAIWCWGYNIYGQLGFNLENSLVPRFLEGFLELGSPDSLRD 413 K V IAAG+YHSLAL DDG++WCWGYNIYGQLGF+ NS P L+ FLEL P+SL + Sbjct: 70 LKVVAIAAGSYHSLALTDDGSVWCWGYNIYGQLGFDGGNSATPCLLKQFLELEPPESLTE 129 Query: 414 ESSIDSKKPLKVCSVKAGGMMSLAIDSLGALWIWGNYPPQNHSGDGEFSHISSSAPLPVW 593 ES SK LK+C +KAGG +S AID LGALW+WGN P + + S++SS P PVW Sbjct: 130 ESGSKSKGSLKICDIKAGGQISFAIDDLGALWMWGNCPKPSGENEVGLSYVSSFTPSPVW 189 Query: 594 EFHGHTVVKVACGNEHVVALVSAEETFT-GGDLICYSWGNNNHRQLGLGDRENRLRPEIV 770 EFHGHTVVKVACGNEH+VALVS ET+ DL+CYSWG+N+H QLGLGD+++R P+I+ Sbjct: 190 EFHGHTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDSRACPQII 249 Query: 771 KTFNRECPWEVYEVACGAFHTAVLTRKKIHGNMIDSSHLESLELGEKESICWTFGLGDNG 950 +TFN PW VYEVACGAFHTA+L+ K + + ES+CWTFGLG+NG Sbjct: 250 ETFNEASPWAVYEVACGAFHTALLSHSKRPCDTL-------------ESVCWTFGLGENG 296 Query: 951 QLGHGTTNSTYLPEPVKDLPPDVFLISVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPDAS 1130 QLGHGTT + +LP+PVK+LP V LISV CGLFHTSVVSS GD+WSWGME+GLGLCPDAS Sbjct: 297 QLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLWSWGMERGLGLCPDAS 356 Query: 1131 FTGTDAGDALSPLWIPCNEYGS-KFVDPLQVVCGAAHTIIVAHSGYGLWAWGRGRSGALG 1307 FTGT+ GDA+SPL I C+ S KF+DP+QV CGAAHT+IVAH GY LW+WGRGRSG LG Sbjct: 357 FTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLG 416 Query: 1308 SGNTADSYAPCSVMWPPLDEDF-QDALEIVGEEARIQDE-------EPRRLAEI---DKK 1454 +G D + P V+WPPL+EDF Q+ E EE ++++ E ++ E+ +KK Sbjct: 417 NGKAVDCFTPTVVLWPPLNEDFDQEETETKCEEDKVEENKTEEDKVEENKIEEVTEENKK 476 Query: 1455 LSLAMEEI*HLRSKLTLTERYVS 1523 L +AMEEI L KL++ ERY S Sbjct: 477 LLMAMEEIKLLLDKLSIMERYAS 499