BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013121
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002456275.1| hypothetical protein SORBIDRAFT_03g033330 [S...    42   8e-07
ref|XP_003569713.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...    42   1e-06
dbj|BAJ94465.1| predicted protein [Hordeum vulgare subsp. vulgar...    41   2e-06
ref|NP_001130888.1| uncharacterized protein LOC100191992 [Zea ma...    41   2e-06
gb|ACL53116.1| unknown [Zea mays] gi|224034505|gb|ACN36328.1| un...    41   2e-06

>ref|XP_002456275.1| hypothetical protein SORBIDRAFT_03g033330 [Sorghum bicolor]
           gi|241928250|gb|EES01395.1| hypothetical protein
           SORBIDRAFT_03g033330 [Sorghum bicolor]
          Length = 560

 Score = 42.4 bits (98), Expect(2) = 8e-07
 Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +3

Query: 3   DSYAPCNVMWPPLDEDFQDALE--FIGEEARIQDEEPGRLAER 125
           DSY PC VMWPPLDE+FQ+  E    G  +R+ D     L ++
Sbjct: 410 DSYIPCVVMWPPLDENFQEIHEDQAGGSTSRVNDRTSTELTQK 452



 Score = 35.4 bits (80), Expect(2) = 8e-07
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = +1

Query: 142 LSLAMEEIQHLRSKLTLIERYVSI 213
           LS A EE+Q LRSKLTL+ERY +I
Sbjct: 453 LSAASEELQFLRSKLTLMERYANI 476


>ref|XP_003569713.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 564

 Score = 41.6 bits (96), Expect(2) = 1e-06
 Identities = 17/26 (65%), Positives = 20/26 (76%)
 Frame = +3

Query: 3   DSYAPCNVMWPPLDEDFQDALEFIGE 80
           DSY PC VMWPPLDE+FQ+  E  G+
Sbjct: 411 DSYTPCVVMWPPLDENFQEIHENQGQ 436



 Score = 35.4 bits (80), Expect(2) = 1e-06
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = +1

Query: 142 LSLAMEEIQHLRSKLTLIERYVSI 213
           LS A EE+Q LRSKLTL+ERY +I
Sbjct: 454 LSTASEELQFLRSKLTLMERYANI 477


>dbj|BAJ94465.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326532960|dbj|BAJ89325.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 566

 Score = 40.8 bits (94), Expect(2) = 2e-06
 Identities = 18/29 (62%), Positives = 22/29 (75%)
 Frame = +3

Query: 3   DSYAPCNVMWPPLDEDFQDALEFIGEEAR 89
           DSY PC VMWPPLDE+FQ   E  G++A+
Sbjct: 413 DSYTPCVVMWPPLDENFQ---EIHGDQAQ 438



 Score = 35.4 bits (80), Expect(2) = 2e-06
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = +1

Query: 142 LSLAMEEIQHLRSKLTLIERYVSI 213
           LS A EE+Q LRSKLTL+ERY +I
Sbjct: 456 LSAASEELQFLRSKLTLMERYANI 479


>ref|NP_001130888.1| uncharacterized protein LOC100191992 [Zea mays]
           gi|194690372|gb|ACF79270.1| unknown [Zea mays]
           gi|219884485|gb|ACL52617.1| unknown [Zea mays]
           gi|219885259|gb|ACL53004.1| unknown [Zea mays]
           gi|219885461|gb|ACL53105.1| unknown [Zea mays]
           gi|238010394|gb|ACR36232.1| unknown [Zea mays]
           gi|414880676|tpg|DAA57807.1| TPA: putative regulator of
           chromosome condensation (RCC1) family protein [Zea mays]
          Length = 556

 Score = 40.8 bits (94), Expect(2) = 2e-06
 Identities = 18/41 (43%), Positives = 25/41 (60%)
 Frame = +3

Query: 3   DSYAPCNVMWPPLDEDFQDALEFIGEEARIQDEEPGRLAER 125
           DSY PC VMWPPLDE+F +  +  G  +R+ D     L ++
Sbjct: 410 DSYIPCVVMWPPLDENFHED-QMGGSTSRVNDHTSTELEQK 449



 Score = 35.4 bits (80), Expect(2) = 2e-06
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = +1

Query: 142 LSLAMEEIQHLRSKLTLIERYVSI 213
           LS A EE+Q LRSKLTL+ERY +I
Sbjct: 450 LSAASEELQFLRSKLTLMERYANI 473


>gb|ACL53116.1| unknown [Zea mays] gi|224034505|gb|ACN36328.1| unknown [Zea mays]
           gi|414880673|tpg|DAA57804.1| TPA: putative regulator of
           chromosome condensation (RCC1) family protein isoform 1
           [Zea mays] gi|414880674|tpg|DAA57805.1| TPA: putative
           regulator of chromosome condensation (RCC1) family
           protein isoform 2 [Zea mays]
          Length = 416

 Score = 40.8 bits (94), Expect(2) = 2e-06
 Identities = 18/41 (43%), Positives = 25/41 (60%)
 Frame = +3

Query: 3   DSYAPCNVMWPPLDEDFQDALEFIGEEARIQDEEPGRLAER 125
           DSY PC VMWPPLDE+F +  +  G  +R+ D     L ++
Sbjct: 270 DSYIPCVVMWPPLDENFHED-QMGGSTSRVNDHTSTELEQK 309



 Score = 35.4 bits (80), Expect(2) = 2e-06
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = +1

Query: 142 LSLAMEEIQHLRSKLTLIERYVSI 213
           LS A EE+Q LRSKLTL+ERY +I
Sbjct: 310 LSAASEELQFLRSKLTLMERYANI 333