BLASTX nr result

ID: Coptis24_contig00013117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013117
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276411.1| PREDICTED: uncharacterized protein LOC100246...   152   3e-35
emb|CAN75217.1| hypothetical protein VITISV_003518 [Vitis vinifera]   152   3e-35
ref|XP_002300355.1| predicted protein [Populus trichocarpa] gi|2...   144   8e-33
ref|XP_002529043.1| conserved hypothetical protein [Ricinus comm...   140   8e-32
emb|CBI26731.3| unnamed protein product [Vitis vinifera]              133   1e-29

>ref|XP_002276411.1| PREDICTED: uncharacterized protein LOC100246876 [Vitis vinifera]
          Length = 1386

 Score =  152 bits (384), Expect = 3e-35
 Identities = 76/114 (66%), Positives = 87/114 (76%)
 Frame = -2

Query: 346  KCLVPYMKKFMKLLTFALKIGAHVAAGMGEMIPDLSREVAHLVDPSLMYXXXXXXXXXXX 167
            K L PYMKKFMKLLTFALKIGAH+AAGMGEMIPDLSREVAHLV+PSLMY           
Sbjct: 1236 KSLAPYMKKFMKLLTFALKIGAHLAAGMGEMIPDLSREVAHLVEPSLMYGAAGAVAAGAV 1295

Query: 166  XXXAIGRVEGSRQRSTHTSFGGENTRNIQQDLRVSQQWLVDFLKDRRCSTGKDI 5
               A+ RV GS  R+   S GGE+TR+  QDLR +QQW+VDFL+DRRCSTG++I
Sbjct: 1296 GAAAVSRVAGSSSRNRARSLGGESTRDFHQDLRAAQQWVVDFLRDRRCSTGREI 1349


>emb|CAN75217.1| hypothetical protein VITISV_003518 [Vitis vinifera]
          Length = 1400

 Score =  152 bits (384), Expect = 3e-35
 Identities = 76/114 (66%), Positives = 87/114 (76%)
 Frame = -2

Query: 346  KCLVPYMKKFMKLLTFALKIGAHVAAGMGEMIPDLSREVAHLVDPSLMYXXXXXXXXXXX 167
            K L PYMKKFMKLLTFALKIGAH+AAGMGEMIPDLSREVAHLV+PSLMY           
Sbjct: 1250 KSLAPYMKKFMKLLTFALKIGAHLAAGMGEMIPDLSREVAHLVEPSLMYGAAGAVAAGAV 1309

Query: 166  XXXAIGRVEGSRQRSTHTSFGGENTRNIQQDLRVSQQWLVDFLKDRRCSTGKDI 5
               A+ RV GS  R+   S GGE+TR+  QDLR +QQW+VDFL+DRRCSTG++I
Sbjct: 1310 GAAAVSRVAGSSSRNRARSLGGESTRDFHQDLRAAQQWVVDFLRDRRCSTGREI 1363


>ref|XP_002300355.1| predicted protein [Populus trichocarpa] gi|222847613|gb|EEE85160.1|
            predicted protein [Populus trichocarpa]
          Length = 1404

 Score =  144 bits (363), Expect = 8e-33
 Identities = 74/114 (64%), Positives = 86/114 (75%)
 Frame = -2

Query: 346  KCLVPYMKKFMKLLTFALKIGAHVAAGMGEMIPDLSREVAHLVDPSLMYXXXXXXXXXXX 167
            K L PYMKKFMKLLTFALKIGAH+AAGMGEMIPDLSREV+HL   SLMY           
Sbjct: 1258 KSLAPYMKKFMKLLTFALKIGAHLAAGMGEMIPDLSREVSHLSGSSLMYGAAGTVAAGAV 1317

Query: 166  XXXAIGRVEGSRQRSTHTSFGGENTRNIQQDLRVSQQWLVDFLKDRRCSTGKDI 5
               A+GR++GSR RS       E++RNIQQD++ +QQW+VDFL+DRRCSTGKDI
Sbjct: 1318 GAAALGRIQGSRNRSR----AAESSRNIQQDVKAAQQWVVDFLRDRRCSTGKDI 1367


>ref|XP_002529043.1| conserved hypothetical protein [Ricinus communis]
            gi|223531523|gb|EEF33354.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1384

 Score =  140 bits (354), Expect = 8e-32
 Identities = 71/114 (62%), Positives = 85/114 (74%)
 Frame = -2

Query: 346  KCLVPYMKKFMKLLTFALKIGAHVAAGMGEMIPDLSREVAHLVDPSLMYXXXXXXXXXXX 167
            +CL PYMKKFMKL+TFALKIGAH+ AGMGEMIPDLSREVAHL   SLMY           
Sbjct: 1238 QCLAPYMKKFMKLVTFALKIGAHLVAGMGEMIPDLSREVAHLTGSSLMYGAAGAVAAGAV 1297

Query: 166  XXXAIGRVEGSRQRSTHTSFGGENTRNIQQDLRVSQQWLVDFLKDRRCSTGKDI 5
               A+GR+EG R R  +     +++R+IQQ+LR +QQW+VDFL+DRRCSTGKDI
Sbjct: 1298 GVAAVGRMEGFRNRGRN----ADSSRDIQQELRAAQQWVVDFLRDRRCSTGKDI 1347


>emb|CBI26731.3| unnamed protein product [Vitis vinifera]
          Length = 1147

 Score =  133 bits (335), Expect = 1e-29
 Identities = 71/114 (62%), Positives = 82/114 (71%)
 Frame = -2

Query: 346  KCLVPYMKKFMKLLTFALKIGAHVAAGMGEMIPDLSREVAHLVDPSLMYXXXXXXXXXXX 167
            K L PYMKKFMKLLTFALKIGAH+AAGMGEMIPDLSREVAHLV+PSL+            
Sbjct: 1020 KSLAPYMKKFMKLLTFALKIGAHLAAGMGEMIPDLSREVAHLVEPSLI------------ 1067

Query: 166  XXXAIGRVEGSRQRSTHTSFGGENTRNIQQDLRVSQQWLVDFLKDRRCSTGKDI 5
                      SR R+   S GGE+TR+  QDLR +QQW+VDFL+DRRCSTG++I
Sbjct: 1068 ---------SSRNRA--RSLGGESTRDFHQDLRAAQQWVVDFLRDRRCSTGREI 1110


Top