BLASTX nr result
ID: Coptis24_contig00013116
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013116 (583 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277376.1| PREDICTED: uncharacterized protein LOC100262... 121 5e-28 emb|CBI33855.3| unnamed protein product [Vitis vinifera] 121 5e-28 ref|XP_002326535.1| predicted protein [Populus trichocarpa] gi|2... 122 4e-26 ref|XP_004136196.1| PREDICTED: E3 ubiquitin-protein ligase RNF14... 104 2e-25 ref|XP_003612847.1| E3 ubiquitin-protein ligase RNF14 [Medicago ... 108 2e-24 >ref|XP_002277376.1| PREDICTED: uncharacterized protein LOC100262589 [Vitis vinifera] Length = 868 Score = 121 bits (304), Expect(2) = 5e-28 Identities = 63/114 (55%), Positives = 78/114 (68%) Frame = -3 Query: 344 YGDNLTICRSKAGQKSFQIYIHIETLDELTISAKLRSFNANVKSGGKLTSPIAPAQPVNE 165 YGDN+ I + G +SFQI++HIE L ELT++AKL S S G+ T + ++ Sbjct: 379 YGDNVFILDRQQGLQSFQIHVHIEALGELTVTAKLNS------SSGRTTE----SDGSDD 428 Query: 164 FLYAFKVQHLPPIVLTCLLPKSYPSHQPPCFTIFVQWLNSERSSNLCHMLDSFW 3 F Y+F VQ+LPPIVLTCLLPK+YPSH PP FTI VQWL+S S LC MLDS W Sbjct: 429 FSYSFNVQYLPPIVLTCLLPKAYPSHLPPYFTISVQWLDSISISKLCSMLDSLW 482 Score = 28.1 bits (61), Expect(2) = 5e-28 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = -2 Query: 411 SVEQLTINN*LQEDELLAMEAI 346 S ++L IN LQEDELLAM++I Sbjct: 357 SEDRLRINAQLQEDELLAMQSI 378 >emb|CBI33855.3| unnamed protein product [Vitis vinifera] Length = 662 Score = 121 bits (304), Expect(2) = 5e-28 Identities = 63/114 (55%), Positives = 78/114 (68%) Frame = -3 Query: 344 YGDNLTICRSKAGQKSFQIYIHIETLDELTISAKLRSFNANVKSGGKLTSPIAPAQPVNE 165 YGDN+ I + G +SFQI++HIE L ELT++AKL S S G+ T + ++ Sbjct: 173 YGDNVFILDRQQGLQSFQIHVHIEALGELTVTAKLNS------SSGRTTE----SDGSDD 222 Query: 164 FLYAFKVQHLPPIVLTCLLPKSYPSHQPPCFTIFVQWLNSERSSNLCHMLDSFW 3 F Y+F VQ+LPPIVLTCLLPK+YPSH PP FTI VQWL+S S LC MLDS W Sbjct: 223 FSYSFNVQYLPPIVLTCLLPKAYPSHLPPYFTISVQWLDSISISKLCSMLDSLW 276 Score = 28.1 bits (61), Expect(2) = 5e-28 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = -2 Query: 411 SVEQLTINN*LQEDELLAMEAI 346 S ++L IN LQEDELLAM++I Sbjct: 151 SEDRLRINAQLQEDELLAMQSI 172 >ref|XP_002326535.1| predicted protein [Populus trichocarpa] gi|222833857|gb|EEE72334.1| predicted protein [Populus trichocarpa] Length = 642 Score = 122 bits (306), Expect = 4e-26 Identities = 65/115 (56%), Positives = 77/115 (66%), Gaps = 1/115 (0%) Frame = -3 Query: 344 YGDNLTICRSKAGQKSFQIYIHIETLDELTISAKLRSF-NANVKSGGKLTSPIAPAQPVN 168 YGDN I + G +SFQI+IHIE E T++AKL S + N KSG + Sbjct: 161 YGDNTFILERQRGLRSFQIHIHIEVPAEFTVTAKLYSLGDCNGKSGSS-----------D 209 Query: 167 EFLYAFKVQHLPPIVLTCLLPKSYPSHQPPCFTIFVQWLNSERSSNLCHMLDSFW 3 EF Y+F+VQ+LPPIVLTCLLPKSYPSH PP FTI VQWL+S S+LC MLDS W Sbjct: 210 EFSYSFEVQYLPPIVLTCLLPKSYPSHLPPYFTISVQWLDSTSISHLCSMLDSIW 264 >ref|XP_004136196.1| PREDICTED: E3 ubiquitin-protein ligase RNF14-like [Cucumis sativus] gi|449525814|ref|XP_004169911.1| PREDICTED: E3 ubiquitin-protein ligase RNF14-like [Cucumis sativus] Length = 638 Score = 104 bits (259), Expect(2) = 2e-25 Identities = 55/114 (48%), Positives = 74/114 (64%) Frame = -3 Query: 344 YGDNLTICRSKAGQKSFQIYIHIETLDELTISAKLRSFNANVKSGGKLTSPIAPAQPVNE 165 YG+N+ I GQ+ FQI+IHIE ++TI+AKL S S ++ SP + +E Sbjct: 153 YGENVYILDEYKGQRRFQIFIHIENPGDITITAKLNS-----SSSLEIKSPNS-----DE 202 Query: 164 FLYAFKVQHLPPIVLTCLLPKSYPSHQPPCFTIFVQWLNSERSSNLCHMLDSFW 3 F +F V++L PIVLTCLLPK YPSH PP +TI ++WL+S R S LC +LD W Sbjct: 203 FSCSFDVKYLNPIVLTCLLPKVYPSHLPPYYTISIRWLDSARISRLCSVLDGIW 256 Score = 36.6 bits (83), Expect(2) = 2e-25 Identities = 19/30 (63%), Positives = 26/30 (86%) Frame = -2 Query: 411 SVEQLTINN*LQEDELLAMEAIIWGQSNYL 322 S EQL+INN LQEDELLA+E+ I+G++ Y+ Sbjct: 131 SEEQLSINNQLQEDELLALES-IYGENVYI 159 >ref|XP_003612847.1| E3 ubiquitin-protein ligase RNF14 [Medicago truncatula] gi|355514182|gb|AES95805.1| E3 ubiquitin-protein ligase RNF14 [Medicago truncatula] Length = 630 Score = 108 bits (271), Expect(2) = 2e-24 Identities = 56/114 (49%), Positives = 73/114 (64%) Frame = -3 Query: 344 YGDNLTICRSKAGQKSFQIYIHIETLDELTISAKLRSFNANVKSGGKLTSPIAPAQPVNE 165 YG+N+ + G + FQI+I+I+ L E+ I+AK+ S N ++ Sbjct: 141 YGENVFSLDTWKGLRCFQIHINIDVLGEIGITAKVNSVNELETLSNNS----------DD 190 Query: 164 FLYAFKVQHLPPIVLTCLLPKSYPSHQPPCFTIFVQWLNSERSSNLCHMLDSFW 3 FLY+FKVQ+LPPIVLTCLLPKSYPSHQPP FTI V+WL S + +LC LDS W Sbjct: 191 FLYSFKVQYLPPIVLTCLLPKSYPSHQPPIFTISVKWLESAKILSLCSKLDSIW 244 Score = 29.3 bits (64), Expect(2) = 2e-24 Identities = 13/22 (59%), Positives = 19/22 (86%) Frame = -2 Query: 411 SVEQLTINN*LQEDELLAMEAI 346 S E++TIN+ LQ+DELL +E+I Sbjct: 119 SEEEITINDQLQQDELLVVESI 140