BLASTX nr result
ID: Coptis24_contig00013115
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013115 (1051 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI23113.3| unnamed protein product [Vitis vinifera] 440 e-121 ref|XP_003574192.1| PREDICTED: LOW QUALITY PROTEIN: mutS2 protei... 400 e-109 ref|NP_001065027.2| Os10g0509000 [Oryza sativa Japonica Group] g... 400 e-109 ref|XP_002519605.1| DNA mismatch repair protein muts2, putative ... 400 e-109 ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera] 396 e-108 >emb|CBI23113.3| unnamed protein product [Vitis vinifera] Length = 807 Score = 440 bits (1132), Expect = e-121 Identities = 226/328 (68%), Positives = 267/328 (81%), Gaps = 1/328 (0%) Frame = -2 Query: 1017 HTSGTKTSNDDLT-QKEWILYLPNAYHPXXXXXXXXXLKKARKNVTNAIANIRRRKLQPE 841 H SG TS ++EW L+LP AYHP L+KARK+V+ AI+ RR+KLQ E Sbjct: 340 HLSGHGTSEASYPIKREWTLHLPKAYHPLLVQQHRENLQKARKDVSLAISEQRRKKLQGE 399 Query: 840 NNSLKEEPDVNIEYLEMEVAKLEKAHPIPVDFFVDTKTRVLIITGPNTGGKTICLKTIGL 661 ++KEE D+N+ LEM+V +LE++ P+PVDFF+ +TRVL+ITGPNTGGKTICLKT+GL Sbjct: 400 KFNVKEETDINLSSLEMQVTRLEQSPPVPVDFFIAQRTRVLVITGPNTGGKTICLKTVGL 459 Query: 660 AAMMAKSGLYVLSSEPVRIPWFDSIFSDIGDEQSLSHSLSTFSGHLRQIGAIQALSTCQS 481 AAMMA+SGL+VL++EPVRIPWFD +F+DIGDEQSLS SLSTFSGHL+QI I+A ST QS Sbjct: 460 AAMMARSGLHVLAAEPVRIPWFDYVFADIGDEQSLSQSLSTFSGHLKQISDIKAQSTNQS 519 Query: 480 LVLLDEVGGGTNPLEGAALGMSILESFAEGGALLTIATTHHGELKTLKYSSTGVENACME 301 LVLLDEVG GTNPLEGAALGMS+LESFAE GALLTIATTHH ELKTLKYS+ ENACME Sbjct: 520 LVLLDEVGAGTNPLEGAALGMSLLESFAETGALLTIATTHHSELKTLKYSNDAFENACME 579 Query: 300 FDDINLKPTYKILWGVPGRSNAINIAERLGLPNTVLDNARELYGTASAEINEVIIEMEQF 121 FD++NLKPTYKILWG+PGRSNAINIAERLG+P VLD ARE YG ASAEINEVII+ME+F Sbjct: 580 FDEVNLKPTYKILWGIPGRSNAINIAERLGVPKKVLDKAREQYGAASAEINEVIIDMERF 639 Query: 120 KQDLQKHVQEADHYLM*GLSMD*LHMLL 37 KQ+ Q+ V +A +YLM LS D LL Sbjct: 640 KQEFQERVNDARYYLM--LSRDLYENLL 665 >ref|XP_003574192.1| PREDICTED: LOW QUALITY PROTEIN: mutS2 protein-like [Brachypodium distachyon] Length = 833 Score = 400 bits (1029), Expect = e-109 Identities = 191/309 (61%), Positives = 254/309 (82%) Frame = -2 Query: 999 TSNDDLTQKEWILYLPNAYHPXXXXXXXXXLKKARKNVTNAIANIRRRKLQPENNSLKEE 820 TS+ L +K W +++PNA+HP L++ +K+V +A A IRRR++ ++ + +++ Sbjct: 367 TSSAQLPKKPWKVFIPNAFHPLLLQQHQENLRRIKKDVASATAEIRRRRIYGQDIAEEDQ 426 Query: 819 PDVNIEYLEMEVAKLEKAHPIPVDFFVDTKTRVLIITGPNTGGKTICLKTIGLAAMMAKS 640 +++ ++ V+KLE+ HPIPVDF + +T VL+ITGPNTGGKTI LKT+GLA++MAK Sbjct: 427 LASDLDSMKNRVSKLERNHPIPVDFMIGEETTVLVITGPNTGGKTISLKTVGLASLMAKI 486 Query: 639 GLYVLSSEPVRIPWFDSIFSDIGDEQSLSHSLSTFSGHLRQIGAIQALSTCQSLVLLDEV 460 GLY+L+SEPV+IPWFD++++DIGDEQSL+ SLSTFSGHL+QIGAI+A ST QSLVLLDEV Sbjct: 487 GLYILASEPVKIPWFDAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAQSTSQSLVLLDEV 546 Query: 459 GGGTNPLEGAALGMSILESFAEGGALLTIATTHHGELKTLKYSSTGVENACMEFDDINLK 280 G GTNPLEGAALGMS+LESFAE G+ LT+ATTHHGELKTLKYS+ ENAC+EFD+ NLK Sbjct: 547 GAGTNPLEGAALGMSLLESFAEAGSFLTLATTHHGELKTLKYSNDSFENACVEFDEENLK 606 Query: 279 PTYKILWGVPGRSNAINIAERLGLPNTVLDNARELYGTASAEINEVIIEMEQFKQDLQKH 100 PT++ILWG+PGRSNAINIAERLGLP ++++AR L GTA AEIN +I++ME+FKQ+ + Sbjct: 607 PTFRILWGIPGRSNAINIAERLGLPLDIIESARHLLGTAGAEINALIMDMEKFKQEYDEQ 666 Query: 99 VQEADHYLM 73 +Q+A HYLM Sbjct: 667 LQQAQHYLM 675 >ref|NP_001065027.2| Os10g0509000 [Oryza sativa Japonica Group] gi|255679545|dbj|BAF26941.2| Os10g0509000 [Oryza sativa Japonica Group] Length = 528 Score = 400 bits (1029), Expect = e-109 Identities = 192/308 (62%), Positives = 254/308 (82%) Frame = -2 Query: 996 SNDDLTQKEWILYLPNAYHPXXXXXXXXXLKKARKNVTNAIANIRRRKLQPENNSLKEEP 817 S+ L++K W L +PNAYHP L +A+K+V +A A IRRR++ ++N +++ Sbjct: 64 SSAHLSKKAWKLCMPNAYHPLLLQQHQENLHRAKKDVASATAEIRRRRIYGQDNVEEDQL 123 Query: 816 DVNIEYLEMEVAKLEKAHPIPVDFFVDTKTRVLIITGPNTGGKTICLKTIGLAAMMAKSG 637 +++ +++ V+++EK P+PVDFF+ T VL+ITGPNTGGKTI LKT+GLA++MAK G Sbjct: 124 ASDLDLMKIRVSQMEKDRPVPVDFFIAEGTTVLVITGPNTGGKTISLKTVGLASLMAKIG 183 Query: 636 LYVLSSEPVRIPWFDSIFSDIGDEQSLSHSLSTFSGHLRQIGAIQALSTCQSLVLLDEVG 457 LY+L+SEPV+IPWF+++++DIGDEQSL+ SLSTFSGHL+QIGAI+A ST QSLVLLDEVG Sbjct: 184 LYILASEPVKIPWFNAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAWSTSQSLVLLDEVG 243 Query: 456 GGTNPLEGAALGMSILESFAEGGALLTIATTHHGELKTLKYSSTGVENACMEFDDINLKP 277 GTNPLEGAALGMS+LESFAE G+ LT+ATTHHGELKTLKYS+ ENACMEFD+ NLKP Sbjct: 244 AGTNPLEGAALGMSLLESFAEAGSFLTLATTHHGELKTLKYSNDLFENACMEFDEDNLKP 303 Query: 276 TYKILWGVPGRSNAINIAERLGLPNTVLDNARELYGTASAEINEVIIEMEQFKQDLQKHV 97 T++ILWG+PGRSNAINIAERLGLP+ +++++R+L GTA AEIN +I++ME FKQ Q H+ Sbjct: 304 TFRILWGIPGRSNAINIAERLGLPSDIIESSRQLLGTAGAEINALIMDMENFKQQYQHHL 363 Query: 96 QEADHYLM 73 QEA +Y+M Sbjct: 364 QEAQYYVM 371 >ref|XP_002519605.1| DNA mismatch repair protein muts2, putative [Ricinus communis] gi|223541195|gb|EEF42750.1| DNA mismatch repair protein muts2, putative [Ricinus communis] Length = 491 Score = 400 bits (1028), Expect = e-109 Identities = 205/325 (63%), Positives = 254/325 (78%) Frame = -2 Query: 1050 KDKDGYFGVEYHTSGTKTSNDDLTQKEWILYLPNAYHPXXXXXXXXXLKKARKNVTNAIA 871 +D DG F E ++ L +K WILY+ AYHP L+KA+K+ A + Sbjct: 71 EDMDGLFTAEASEMRALKGSNPLERK-WILYMRKAYHPLLLQQHRQNLQKAQKDAKKATS 129 Query: 870 NIRRRKLQPENNSLKEEPDVNIEYLEMEVAKLEKAHPIPVDFFVDTKTRVLIITGPNTGG 691 +KLQ +N + E D++ E++V+ LE+AHP+PVDF + +RVL+ITGPNTGG Sbjct: 130 ----QKLQGDNGMSRGETDLDSSSSEIKVSALEQAHPVPVDFLIAQNSRVLVITGPNTGG 185 Query: 690 KTICLKTIGLAAMMAKSGLYVLSSEPVRIPWFDSIFSDIGDEQSLSHSLSTFSGHLRQIG 511 KTICLKT+GLAAMMAKSGLYVL SE V++PWFD I +DIGDEQSLS SLSTFSGHL+QI Sbjct: 186 KTICLKTVGLAAMMAKSGLYVLCSESVQLPWFDYILADIGDEQSLSQSLSTFSGHLKQIS 245 Query: 510 AIQALSTCQSLVLLDEVGGGTNPLEGAALGMSILESFAEGGALLTIATTHHGELKTLKYS 331 I++ ST +SLVLLDEVG GTNPLEGAALGMS+LESFAE GALLTIATTHH ELK+LKYS Sbjct: 246 DIRSQSTNRSLVLLDEVGAGTNPLEGAALGMSLLESFAEDGALLTIATTHHSELKSLKYS 305 Query: 330 STGVENACMEFDDINLKPTYKILWGVPGRSNAINIAERLGLPNTVLDNARELYGTASAEI 151 ++ ENACMEFD++NLKPTYKI+WGVPGRSNAINI+E+LGLP+ V++ ARELYG ASAEI Sbjct: 306 NSAFENACMEFDEVNLKPTYKIIWGVPGRSNAINISEKLGLPDRVINIARELYGAASAEI 365 Query: 150 NEVIIEMEQFKQDLQKHVQEADHYL 76 NEVII+ME+FKQ++Q+ + EA H + Sbjct: 366 NEVIIDMERFKQEVQELLYEAQHQI 390 >ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera] Length = 791 Score = 396 bits (1018), Expect = e-108 Identities = 212/328 (64%), Positives = 248/328 (75%), Gaps = 1/328 (0%) Frame = -2 Query: 1017 HTSGTKTSNDDLT-QKEWILYLPNAYHPXXXXXXXXXLKKARKNVTNAIANIRRRKLQPE 841 H SG TS ++EW L+LP AYHP L+KARK+V+ AI+ Sbjct: 351 HLSGHGTSEASYPIKREWTLHLPKAYHPLLVQQHRENLQKARKDVSLAIS---------- 400 Query: 840 NNSLKEEPDVNIEYLEMEVAKLEKAHPIPVDFFVDTKTRVLIITGPNTGGKTICLKTIGL 661 + Y+ LE++ P+PVDFF+ +TRVL+ITGPNTGGKTICLKT+GL Sbjct: 401 -----------VSYV------LEQSPPVPVDFFIAQRTRVLVITGPNTGGKTICLKTVGL 443 Query: 660 AAMMAKSGLYVLSSEPVRIPWFDSIFSDIGDEQSLSHSLSTFSGHLRQIGAIQALSTCQS 481 AAMMA+SGL+VL++EPVRIPWFD +F+DIGDEQSLS SLSTFSGHL+QI I+A ST QS Sbjct: 444 AAMMARSGLHVLAAEPVRIPWFDYVFADIGDEQSLSQSLSTFSGHLKQISDIKAQSTNQS 503 Query: 480 LVLLDEVGGGTNPLEGAALGMSILESFAEGGALLTIATTHHGELKTLKYSSTGVENACME 301 LVLLDEVG GTNPLEGAALGMS+LESFAE GALLTIATTHH ELKTLKYS+ ENACME Sbjct: 504 LVLLDEVGAGTNPLEGAALGMSLLESFAETGALLTIATTHHSELKTLKYSNDAFENACME 563 Query: 300 FDDINLKPTYKILWGVPGRSNAINIAERLGLPNTVLDNARELYGTASAEINEVIIEMEQF 121 FD++NLKPTYKILWG+PGRSNAINIAERLG+P VLD ARE YG ASAEINEVII+ME+F Sbjct: 564 FDEVNLKPTYKILWGIPGRSNAINIAERLGVPKKVLDKAREQYGAASAEINEVIIDMERF 623 Query: 120 KQDLQKHVQEADHYLM*GLSMD*LHMLL 37 KQ+ Q+ V +A +YLM LS D LL Sbjct: 624 KQEFQERVNDARYYLM--LSRDLYENLL 649