BLASTX nr result

ID: Coptis24_contig00013112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013112
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276733.1| PREDICTED: uncharacterized protein LOC100266...    83   3e-14
ref|XP_004139810.1| PREDICTED: uncharacterized protein LOC101208...    82   4e-14
ref|XP_002528624.1| conserved hypothetical protein [Ricinus comm...    80   3e-13
dbj|BAE48661.1| Pm27 [Prunus mume]                                     75   6e-12
ref|XP_002304076.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11

>ref|XP_002276733.1| PREDICTED: uncharacterized protein LOC100266910 [Vitis vinifera]
          Length = 363

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 57/144 (39%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
 Frame = +3

Query: 6   EHPSARPREVDPIXXXXXXXXXXXXXYDDVLSTIHATTPGARVFGDYVIE-DHYGFXXXX 182
           EHPSA+PREVDPI              DDV+STI ++ PGA VFGDYVIE +HY F    
Sbjct: 184 EHPSAQPREVDPILEQKWRRLERERERDDVISTIRSSMPGAMVFGDYVIEGNHYDFDSDE 243

Query: 183 XXXXXXXXF---GGSELGISDPIFNIFLMYQAYN-AGNASLQSRLRR-QRAYSHTMNEIG 347
                        G E+G    + N+FL+  A+  AGN  L  RLRR +R     ++E  
Sbjct: 244 GEHFDADAVERNEGFEVGFDSNLVNVFLLLHAFGPAGNIGLNRRLRRSERGLGRALDE-- 301

Query: 348 RRNVGIPAVTTASGEDASDGGNDD 419
              VGI   + A   D +D  N D
Sbjct: 302 -GAVGIHETSPADSIDENDIHNSD 324


>ref|XP_004139810.1| PREDICTED: uncharacterized protein LOC101208946 [Cucumis sativus]
           gi|449492613|ref|XP_004159048.1| PREDICTED:
           uncharacterized LOC101208946 [Cucumis sativus]
          Length = 364

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 54/144 (37%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
 Frame = +3

Query: 6   EHPSARPREVDPIXXXXXXXXXXXXXYDDVLSTIHATTPGARVFGDYVIE-DHYGFXXXX 182
           EHPSARPREVDP+              +DV+STI +T PGA VFGDYVIE +++GF    
Sbjct: 183 EHPSARPREVDPVLEQKWRSLERERERNDVMSTIRSTMPGAVVFGDYVIEGNNFGFDSDE 242

Query: 183 XXXXXXXXF----GGSELGISDPIFNIFLMYQAYNAGNASLQSRLRR-QRAYSHTMNEIG 347
                         G E+G    + N+FL+  A+   +  L  RLR+ +R +S   NE  
Sbjct: 243 EDGGLNANSAERNAGFEVGFDSNLVNMFLLLHAFGPSSGDLNRRLRQPERIFSPRSNE-- 300

Query: 348 RRNVGIPAVTTASGEDASDGGNDD 419
               GIP  T  S  D+ + G+D+
Sbjct: 301 -GVAGIPNTTPLSSFDSINEGSDN 323


>ref|XP_002528624.1| conserved hypothetical protein [Ricinus communis]
           gi|223531969|gb|EEF33782.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 358

 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 52/143 (36%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
 Frame = +3

Query: 9   HPSARPREVDPIXXXXXXXXXXXXXYDDVLSTIHATTPGARVFGDYVIE-DHYGFXXXXX 185
           HPSARPREVDP+             +DDV+STI +T PGA VFGDYVIE +++GF     
Sbjct: 179 HPSARPREVDPMLEQKWRRLEREREHDDVISTIRSTMPGAMVFGDYVIEGNNHGFDSDEE 238

Query: 186 XXXXXXXF----GGSELGISDPIFNIFLMYQAYNAGNASLQSRLRR-QRAYSHTMNEIGR 350
                       GG ++G    + N+FL+  A+      L  RLR+ +R+     NE   
Sbjct: 239 NGGFDADAAERNGGLDVGFDRNLVNVFLLLHAFGPSGDGLSRRLRQPERSSYRASNESAT 298

Query: 351 RNVGI-PAVTTASGEDASDGGND 416
               + P     S +D +DG ND
Sbjct: 299 DTHHVSPVNGLNSSDDDNDGDND 321


>dbj|BAE48661.1| Pm27 [Prunus mume]
          Length = 362

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 52/144 (36%), Positives = 71/144 (49%), Gaps = 6/144 (4%)
 Frame = +3

Query: 6   EHPSARPREVDPIXXXXXXXXXXXXXYDDVLSTIHATTPGARVFGDYVIE-DHYGFXXXX 182
           EHPSARPREVDP+              DDV+STI ++ PGA VFGDYVIE ++YGF    
Sbjct: 183 EHPSARPREVDPVLEQKWRRLEHERETDDVISTIQSSMPGAMVFGDYVIEGNNYGFDTDE 242

Query: 183 XXXXXXXXF----GGSELGISDPIFNIFLMYQAYNAGNASLQSRLRR-QRAYSHTMNEIG 347
                        GG  LG    + N+F +  A+ +       RLR+ +RA  H  +   
Sbjct: 243 EDGGFDAEAGERNGGFGLGFDGNLVNVFFLLHAFGSSGT---GRLRQPERALHHPSDGSA 299

Query: 348 RRNVGIPAVTTASGEDASDGGNDD 419
              VGI   +   G D+SD  +++
Sbjct: 300 ---VGIRHSSPIGGSDSSDQDDEN 320


>ref|XP_002304076.1| predicted protein [Populus trichocarpa] gi|222841508|gb|EEE79055.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 50/144 (34%), Positives = 62/144 (43%), Gaps = 7/144 (4%)
 Frame = +3

Query: 9   HPSARPREVDPIXXXXXXXXXXXXXYDDVLSTIHATTPGARVFGDYVIE-DHYGFXXXXX 185
           HPSARPR VDPI             +DDV+STI +T PGA VFGDYVIE  HYGF     
Sbjct: 179 HPSARPRAVDPILEQKWRRLEREREHDDVISTIRSTMPGAMVFGDYVIEGSHYGFDTDED 238

Query: 186 XXXXXXXF---GGSELGISDPIFNIFLMYQAYNAGNASLQSRLRRQRAYSHTMNE---IG 347
                       G E+G    + N+FL+  A+         RLR        M +   + 
Sbjct: 239 GGFDADATERNEGFEVGFDRNLVNVFLLLHAFGPTGDDHSRRLRHPERTDRQMTDESAVS 298

Query: 348 RRNVGIPAVTTASGEDASDGGNDD 419
             +         S ED  +  NDD
Sbjct: 299 FHHTSPVEGLGLSDEDDDNNINDD 322


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