BLASTX nr result

ID: Coptis24_contig00013110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013110
         (856 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270752.1| PREDICTED: uncharacterized protein LOC100259...   108   1e-21
ref|XP_002524096.1| conserved hypothetical protein [Ricinus comm...    87   6e-15
ref|XP_002322767.1| predicted protein [Populus trichocarpa] gi|2...    79   1e-12
ref|XP_003553628.1| PREDICTED: uncharacterized protein LOC100794...    72   2e-10
ref|XP_002309264.1| predicted protein [Populus trichocarpa] gi|2...    69   1e-09

>ref|XP_002270752.1| PREDICTED: uncharacterized protein LOC100259819 [Vitis vinifera]
          Length = 151

 Score =  108 bits (271), Expect = 1e-21
 Identities = 66/156 (42%), Positives = 83/156 (53%), Gaps = 2/156 (1%)
 Frame = +1

Query: 148 MTRQIVLQTPSQSNRREPLLSKDPPPSANGNTRFXXXXXXXXXXXXXXXXXXPCGLMNLL 327
           MTRQIV++ PS  NRR+PLL+     S++G+ RF                  PCGL+NLL
Sbjct: 1   MTRQIVMRPPSL-NRRQPLLASQ---SSSGSIRFAEVAGETTAECAAVACCCPCGLVNLL 56

Query: 328 VLAVYKLPAGLCXXXXXXXXXXXXMNAGLF-PQRKTCGCGCEEDGEFQVHPVSVEMF-XX 501
           VLAVYK+PAGLC            +  GL  P+R+ C CGC +D E Q+HP+S ++    
Sbjct: 57  VLAVYKVPAGLCRRALKKKRLRRMIKKGLLQPRRRRCPCGC-DDTELQIHPISGDVTDAD 115

Query: 502 XXXXXXXXXXXXXXXXXXXWDKFYSTGFWRSPSQRE 609
                              WDKFYSTGFWRS SQRE
Sbjct: 116 ISVKSNESEQEVMDLEKEMWDKFYSTGFWRSSSQRE 151


>ref|XP_002524096.1| conserved hypothetical protein [Ricinus communis]
           gi|223536664|gb|EEF38306.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 252

 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 60/176 (34%), Positives = 74/176 (42%), Gaps = 22/176 (12%)
 Frame = +1

Query: 148 MTRQIVLQTPSQS--------NRREPLLSKDPPPSANGNT-----RFXXXXXXXXXXXXX 288
           ++RQI +  PS S         +R  LL K    SA+ N+      F             
Sbjct: 58  ISRQIFIHPPSPSPSSSSLSLKKRRSLLRKHAHSSASTNSSIRSGHFAEFAGGTTAECAA 117

Query: 289 XXXXXPCGLMNLLVLAVYKLPAGLCXXXXXXXXXXXXMNAGLFPQR-KTCGCGCEEDGEF 465
                PCGL+NLL LA+YK+PAGLC            M  GL P R K C CGC+E  E 
Sbjct: 118 ICCCCPCGLVNLLYLAIYKVPAGLCRRALRRKRRKQLMKEGLLPARTKRCRCGCDET-EI 176

Query: 466 QVHPVSVEM--------FXXXXXXXXXXXXXXXXXXXXXWDKFYSTGFWRSPSQRE 609
           Q+HP  + +                              W+ FYSTGFWRSPSQRE
Sbjct: 177 QIHPEMIRLDEEETENGDDDDNNVADEEDDAMVKLEKEMWETFYSTGFWRSPSQRE 232


>ref|XP_002322767.1| predicted protein [Populus trichocarpa] gi|222867397|gb|EEF04528.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 42/106 (39%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
 Frame = +1

Query: 304 PCGLMNLLVLAVYKLPAGLCXXXXXXXXXXXXMNAGLFPQR-KTCGCGCEEDGEFQVHP- 477
           PCGL+NLLVL +YK+PAG+C            +  GLFP R +  GCG  +D E  +HP 
Sbjct: 50  PCGLVNLLVLTIYKIPAGICRRALKRKQRKKLIKKGLFPPRGRGYGCGSCDDPELHIHPM 109

Query: 478 --VSVEMFXXXXXXXXXXXXXXXXXXXXXWDKFYSTGFWRSPSQRE 609
             V   +                      W+ FY TGFWRSPSQRE
Sbjct: 110 ARVEDSLREFDGEEAVKKEEAMLRLEKEMWETFYGTGFWRSPSQRE 155


>ref|XP_003553628.1| PREDICTED: uncharacterized protein LOC100794951 [Glycine max]
          Length = 195

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 50/163 (30%), Positives = 69/163 (42%), Gaps = 9/163 (5%)
 Frame = +1

Query: 148 MTRQIVL-QTPSQSNRREPLLSKDPPPSANGNTRFXXXXXXXXXXXXXXXXXXPCGLMNL 324
           M+ +I+L Q    +NRR+PLL +  P      TR                   PCG+ N 
Sbjct: 1   MSNRIILRQAGGSTNRRQPLLLQRRPSKMA--TRVGEVVGGTAAECVAVCCCFPCGVANF 58

Query: 325 LVLAVYKLPAGLCXXXXXXXXXXXXMNAGLF-PQRKTCGCGCEED-GEFQVHP------V 480
           L+LA+YK+PAGL             +  GL  P R+ C CGC +D    +++P      V
Sbjct: 59  LLLAIYKVPAGLYRRVLKKRRHQKMLKEGLRKPTRRHCSCGCCDDVSGSRIYPMCANDAV 118

Query: 481 SVEMFXXXXXXXXXXXXXXXXXXXXXWDKFYSTGFWRSPSQRE 609
            ++                       WD+FY TGFWRS S RE
Sbjct: 119 DIKRLRSTTTELDNNDDATRALEKEMWDQFYGTGFWRSSSNRE 161


>ref|XP_002309264.1| predicted protein [Populus trichocarpa] gi|222855240|gb|EEE92787.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 40/106 (37%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
 Frame = +1

Query: 304 PCGLMNLLVLAVYKLPAGLCXXXXXXXXXXXXMNAGLFPQRKTCGCGCEEDG-EFQVHP- 477
           PCGL+NLLVL +YK+P G+C            +  GL P R T  C C+ DG E Q+HP 
Sbjct: 66  PCGLVNLLVLTMYKVPVGICRRALRRKRRKKLIKKGLLPPR-TRSCSCDYDGTELQIHPM 124

Query: 478 --VSVEMFXXXXXXXXXXXXXXXXXXXXXWDKFYSTGFWRSPSQRE 609
             V   +                      W+ F  TGFWRS SQRE
Sbjct: 125 ACVEDSLREFDEEAALKEEEAMVKLEKEMWETFCGTGFWRSSSQRE 170


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