BLASTX nr result
ID: Coptis24_contig00013110
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013110 (856 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270752.1| PREDICTED: uncharacterized protein LOC100259... 108 1e-21 ref|XP_002524096.1| conserved hypothetical protein [Ricinus comm... 87 6e-15 ref|XP_002322767.1| predicted protein [Populus trichocarpa] gi|2... 79 1e-12 ref|XP_003553628.1| PREDICTED: uncharacterized protein LOC100794... 72 2e-10 ref|XP_002309264.1| predicted protein [Populus trichocarpa] gi|2... 69 1e-09 >ref|XP_002270752.1| PREDICTED: uncharacterized protein LOC100259819 [Vitis vinifera] Length = 151 Score = 108 bits (271), Expect = 1e-21 Identities = 66/156 (42%), Positives = 83/156 (53%), Gaps = 2/156 (1%) Frame = +1 Query: 148 MTRQIVLQTPSQSNRREPLLSKDPPPSANGNTRFXXXXXXXXXXXXXXXXXXPCGLMNLL 327 MTRQIV++ PS NRR+PLL+ S++G+ RF PCGL+NLL Sbjct: 1 MTRQIVMRPPSL-NRRQPLLASQ---SSSGSIRFAEVAGETTAECAAVACCCPCGLVNLL 56 Query: 328 VLAVYKLPAGLCXXXXXXXXXXXXMNAGLF-PQRKTCGCGCEEDGEFQVHPVSVEMF-XX 501 VLAVYK+PAGLC + GL P+R+ C CGC +D E Q+HP+S ++ Sbjct: 57 VLAVYKVPAGLCRRALKKKRLRRMIKKGLLQPRRRRCPCGC-DDTELQIHPISGDVTDAD 115 Query: 502 XXXXXXXXXXXXXXXXXXXWDKFYSTGFWRSPSQRE 609 WDKFYSTGFWRS SQRE Sbjct: 116 ISVKSNESEQEVMDLEKEMWDKFYSTGFWRSSSQRE 151 >ref|XP_002524096.1| conserved hypothetical protein [Ricinus communis] gi|223536664|gb|EEF38306.1| conserved hypothetical protein [Ricinus communis] Length = 252 Score = 86.7 bits (213), Expect = 6e-15 Identities = 60/176 (34%), Positives = 74/176 (42%), Gaps = 22/176 (12%) Frame = +1 Query: 148 MTRQIVLQTPSQS--------NRREPLLSKDPPPSANGNT-----RFXXXXXXXXXXXXX 288 ++RQI + PS S +R LL K SA+ N+ F Sbjct: 58 ISRQIFIHPPSPSPSSSSLSLKKRRSLLRKHAHSSASTNSSIRSGHFAEFAGGTTAECAA 117 Query: 289 XXXXXPCGLMNLLVLAVYKLPAGLCXXXXXXXXXXXXMNAGLFPQR-KTCGCGCEEDGEF 465 PCGL+NLL LA+YK+PAGLC M GL P R K C CGC+E E Sbjct: 118 ICCCCPCGLVNLLYLAIYKVPAGLCRRALRRKRRKQLMKEGLLPARTKRCRCGCDET-EI 176 Query: 466 QVHPVSVEM--------FXXXXXXXXXXXXXXXXXXXXXWDKFYSTGFWRSPSQRE 609 Q+HP + + W+ FYSTGFWRSPSQRE Sbjct: 177 QIHPEMIRLDEEETENGDDDDNNVADEEDDAMVKLEKEMWETFYSTGFWRSPSQRE 232 >ref|XP_002322767.1| predicted protein [Populus trichocarpa] gi|222867397|gb|EEF04528.1| predicted protein [Populus trichocarpa] Length = 171 Score = 79.0 bits (193), Expect = 1e-12 Identities = 42/106 (39%), Positives = 52/106 (49%), Gaps = 4/106 (3%) Frame = +1 Query: 304 PCGLMNLLVLAVYKLPAGLCXXXXXXXXXXXXMNAGLFPQR-KTCGCGCEEDGEFQVHP- 477 PCGL+NLLVL +YK+PAG+C + GLFP R + GCG +D E +HP Sbjct: 50 PCGLVNLLVLTIYKIPAGICRRALKRKQRKKLIKKGLFPPRGRGYGCGSCDDPELHIHPM 109 Query: 478 --VSVEMFXXXXXXXXXXXXXXXXXXXXXWDKFYSTGFWRSPSQRE 609 V + W+ FY TGFWRSPSQRE Sbjct: 110 ARVEDSLREFDGEEAVKKEEAMLRLEKEMWETFYGTGFWRSPSQRE 155 >ref|XP_003553628.1| PREDICTED: uncharacterized protein LOC100794951 [Glycine max] Length = 195 Score = 71.6 bits (174), Expect = 2e-10 Identities = 50/163 (30%), Positives = 69/163 (42%), Gaps = 9/163 (5%) Frame = +1 Query: 148 MTRQIVL-QTPSQSNRREPLLSKDPPPSANGNTRFXXXXXXXXXXXXXXXXXXPCGLMNL 324 M+ +I+L Q +NRR+PLL + P TR PCG+ N Sbjct: 1 MSNRIILRQAGGSTNRRQPLLLQRRPSKMA--TRVGEVVGGTAAECVAVCCCFPCGVANF 58 Query: 325 LVLAVYKLPAGLCXXXXXXXXXXXXMNAGLF-PQRKTCGCGCEED-GEFQVHP------V 480 L+LA+YK+PAGL + GL P R+ C CGC +D +++P V Sbjct: 59 LLLAIYKVPAGLYRRVLKKRRHQKMLKEGLRKPTRRHCSCGCCDDVSGSRIYPMCANDAV 118 Query: 481 SVEMFXXXXXXXXXXXXXXXXXXXXXWDKFYSTGFWRSPSQRE 609 ++ WD+FY TGFWRS S RE Sbjct: 119 DIKRLRSTTTELDNNDDATRALEKEMWDQFYGTGFWRSSSNRE 161 >ref|XP_002309264.1| predicted protein [Populus trichocarpa] gi|222855240|gb|EEE92787.1| predicted protein [Populus trichocarpa] Length = 188 Score = 69.3 bits (168), Expect = 1e-09 Identities = 40/106 (37%), Positives = 49/106 (46%), Gaps = 4/106 (3%) Frame = +1 Query: 304 PCGLMNLLVLAVYKLPAGLCXXXXXXXXXXXXMNAGLFPQRKTCGCGCEEDG-EFQVHP- 477 PCGL+NLLVL +YK+P G+C + GL P R T C C+ DG E Q+HP Sbjct: 66 PCGLVNLLVLTMYKVPVGICRRALRRKRRKKLIKKGLLPPR-TRSCSCDYDGTELQIHPM 124 Query: 478 --VSVEMFXXXXXXXXXXXXXXXXXXXXXWDKFYSTGFWRSPSQRE 609 V + W+ F TGFWRS SQRE Sbjct: 125 ACVEDSLREFDEEAALKEEEAMVKLEKEMWETFCGTGFWRSSSQRE 170