BLASTX nr result

ID: Coptis24_contig00013109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013109
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270752.1| PREDICTED: uncharacterized protein LOC100259...    82   5e-14
ref|XP_002322767.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002524096.1| conserved hypothetical protein [Ricinus comm...    79   4e-13
ref|XP_002309264.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_003553628.1| PREDICTED: uncharacterized protein LOC100794...    59   3e-07

>ref|XP_002270752.1| PREDICTED: uncharacterized protein LOC100259819 [Vitis vinifera]
          Length = 151

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/77 (50%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
 Frame = +1

Query: 1   RRKRLMNSGLF-PHGKSCGCGCEEDGEFQVHPVSVEMFKVE-NIVEKLNEEKVMELEKEM 174
           R +R++  GL  P  + C CGC+ D E Q+HP+S ++   + ++    +E++VM+LEKEM
Sbjct: 76  RLRRMIKKGLLQPRRRRCPCGCD-DTELQIHPISGDVTDADISVKSNESEQEVMDLEKEM 134

Query: 175 WDKFYSTGFWRSPSQRE 225
           WDKFYSTGFWRS SQRE
Sbjct: 135 WDKFYSTGFWRSSSQRE 151


>ref|XP_002322767.1| predicted protein [Populus trichocarpa] gi|222867397|gb|EEF04528.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 6/81 (7%)
 Frame = +1

Query: 1   RRKRLMNSGLFP-HGKSCGCGCEEDGEFQVHPV-----SVEMFKVENIVEKLNEEKVMEL 162
           +RK+L+  GLFP  G+  GCG  +D E  +HP+     S+  F  E  V+K  EE ++ L
Sbjct: 77  QRKKLIKKGLFPPRGRGYGCGSCDDPELHIHPMARVEDSLREFDGEEAVKK--EEAMLRL 134

Query: 163 EKEMWDKFYSTGFWRSPSQRE 225
           EKEMW+ FY TGFWRSPSQRE
Sbjct: 135 EKEMWETFYGTGFWRSPSQRE 155


>ref|XP_002524096.1| conserved hypothetical protein [Ricinus communis]
           gi|223536664|gb|EEF38306.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 252

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/84 (48%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
 Frame = +1

Query: 1   RRKRLMNSGLFP-HGKSCGCGCEEDGEFQVHPVSVEMFKVE--------NIVEKLNEEKV 153
           RRK+LM  GL P   K C CGC+E  E Q+HP  + + + E        N V    ++ +
Sbjct: 150 RRKQLMKEGLLPARTKRCRCGCDET-EIQIHPEMIRLDEEETENGDDDDNNVADEEDDAM 208

Query: 154 MELEKEMWDKFYSTGFWRSPSQRE 225
           ++LEKEMW+ FYSTGFWRSPSQRE
Sbjct: 209 VKLEKEMWETFYSTGFWRSPSQRE 232


>ref|XP_002309264.1| predicted protein [Populus trichocarpa] gi|222855240|gb|EEE92787.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
 Frame = +1

Query: 1   RRKRLMNSGLFPHGKSCGCGCEEDG-EFQVHPVSVEMFKVENIVEKL---NEEKVMELEK 168
           RRK+L+  GL P  ++  C C+ DG E Q+HP++     +    E+     EE +++LEK
Sbjct: 93  RRKKLIKKGLLPP-RTRSCSCDYDGTELQIHPMACVEDSLREFDEEAALKEEEAMVKLEK 151

Query: 169 EMWDKFYSTGFWRSPSQRE 225
           EMW+ F  TGFWRS SQRE
Sbjct: 152 EMWETFCGTGFWRSSSQRE 170


>ref|XP_003553628.1| PREDICTED: uncharacterized protein LOC100794951 [Glycine max]
          Length = 195

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 8/83 (9%)
 Frame = +1

Query: 1   RRKRLMNSGLF-PHGKSCGCGCEED-GEFQVHPV----SVEMFKVENIVEKL--NEEKVM 156
           R ++++  GL  P  + C CGC +D    +++P+    +V++ ++ +   +L  N++   
Sbjct: 79  RHQKMLKEGLRKPTRRHCSCGCCDDVSGSRIYPMCANDAVDIKRLRSTTTELDNNDDATR 138

Query: 157 ELEKEMWDKFYSTGFWRSPSQRE 225
            LEKEMWD+FY TGFWRS S RE
Sbjct: 139 ALEKEMWDQFYGTGFWRSSSNRE 161


Top