BLASTX nr result
ID: Coptis24_contig00013107
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00013107
(1960 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002527602.1| nucleic acid binding protein, putative [Rici... 219 1e-72
ref|XP_002316904.1| predicted protein [Populus trichocarpa] gi|2... 213 6e-72
ref|XP_003543245.1| PREDICTED: uncharacterized protein LOC100778... 210 6e-71
ref|XP_003539593.1| PREDICTED: uncharacterized protein LOC100808... 208 5e-70
emb|CBI20322.3| unnamed protein product [Vitis vinifera] 202 7e-70
>ref|XP_002527602.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223533019|gb|EEF34783.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 327
Score = 219 bits (557), Expect(2) = 1e-72
Identities = 104/124 (83%), Positives = 115/124 (92%), Gaps = 1/124 (0%)
Frame = -3
Query: 1001 AVTNSWGKYGIIREIDMWNKRPEFTAWLLEVKQVNLESLPNWEEKQMFKQFMEDHNTATF 822
AVT+SWGKYG+IRE DMWNKRPEFTAWL EVKQVNLESLPNWEEKQMFK+FMEDHNTATF
Sbjct: 161 AVTDSWGKYGVIRETDMWNKRPEFTAWLAEVKQVNLESLPNWEEKQMFKEFMEDHNTATF 220
Query: 821 PSKKYYDLDAYHKRKMEKEMKKGY-KILETERTVFNDEEQRRHELMLAREKQKEEQVVAL 645
PSKKYY+LDAY+KR+MEKEMKKG+ K ETERTVFNDEEQRR ELM AREKQKE++V AL
Sbjct: 221 PSKKYYNLDAYYKRQMEKEMKKGFKKFQETERTVFNDEEQRRQELMRAREKQKEQEVEAL 280
Query: 644 KLPL 633
K+ +
Sbjct: 281 KISM 284
Score = 83.2 bits (204), Expect(2) = 1e-72
Identities = 43/52 (82%), Positives = 45/52 (86%)
Frame = -2
Query: 573 QVVALKRSMQSGMAQAMKEQAQLREEMALHYKLGNSEAAAAIQRRLDPDVAM 418
+V ALK SMQSGMAQAMKEQ QLREEMA YKLGN EAAAAIQRRLDPD+ M
Sbjct: 276 EVEALKISMQSGMAQAMKEQTQLREEMAYQYKLGNFEAAAAIQRRLDPDIPM 327
>ref|XP_002316904.1| predicted protein [Populus trichocarpa] gi|222859969|gb|EEE97516.1|
predicted protein [Populus trichocarpa]
Length = 288
Score = 213 bits (541), Expect(2) = 6e-72
Identities = 101/121 (83%), Positives = 111/121 (91%), Gaps = 1/121 (0%)
Frame = -3
Query: 1001 AVTNSWGKYGIIREIDMWNKRPEFTAWLLEVKQVNLESLPNWEEKQMFKQFMEDHNTATF 822
AVTNSWGKYGIIRE DMWNKRPEFTAWL EVKQVNLE+LPNWEEKQMFKQFMEDHNTATF
Sbjct: 122 AVTNSWGKYGIIRETDMWNKRPEFTAWLAEVKQVNLETLPNWEEKQMFKQFMEDHNTATF 181
Query: 821 PSKKYYDLDAYHKRKMEKEMKKGY-KILETERTVFNDEEQRRHELMLAREKQKEEQVVAL 645
PSKKYY+LDAY++ KMEKE+KKG+ K++ +ERTVFNDEEQRR ELM REKQKE +V AL
Sbjct: 182 PSKKYYNLDAYYQHKMEKELKKGFKKVMASERTVFNDEEQRRQELMREREKQKEAEVEAL 241
Query: 644 K 642
K
Sbjct: 242 K 242
Score = 87.0 bits (214), Expect(2) = 6e-72
Identities = 46/52 (88%), Positives = 47/52 (90%)
Frame = -2
Query: 573 QVVALKRSMQSGMAQAMKEQAQLREEMALHYKLGNSEAAAAIQRRLDPDVAM 418
+V ALK SMQSGMAQAMKEQAQLREEMA YKLGN EAAAAIQRRLDPDVAM
Sbjct: 237 EVEALKCSMQSGMAQAMKEQAQLREEMAYQYKLGNFEAAAAIQRRLDPDVAM 288
>ref|XP_003543245.1| PREDICTED: uncharacterized protein LOC100778706 [Glycine max]
Length = 380
Score = 210 bits (534), Expect(2) = 6e-71
Identities = 98/121 (80%), Positives = 111/121 (91%), Gaps = 1/121 (0%)
Frame = -3
Query: 1001 AVTNSWGKYGIIREIDMWNKRPEFTAWLLEVKQVNLESLPNWEEKQMFKQFMEDHNTATF 822
AVTNSWGKYG+IRE DMW KRPEFTAWL EVKQVNLE++ NWEEKQMFK+FMEDHNTATF
Sbjct: 214 AVTNSWGKYGVIRETDMWTKRPEFTAWLAEVKQVNLENMSNWEEKQMFKEFMEDHNTATF 273
Query: 821 PSKKYYDLDAYHKRKMEKEMKKGY-KILETERTVFNDEEQRRHELMLAREKQKEEQVVAL 645
PSKKYY+LDAY++R+MEKEMKKG+ K+ TERT+FNDEEQRR EL+ AREK KEEQV+AL
Sbjct: 274 PSKKYYNLDAYYRREMEKEMKKGFKKVQATERTIFNDEEQRRQELLQAREKHKEEQVMAL 333
Query: 644 K 642
K
Sbjct: 334 K 334
Score = 86.3 bits (212), Expect(2) = 6e-71
Identities = 44/52 (84%), Positives = 47/52 (90%)
Frame = -2
Query: 573 QVVALKRSMQSGMAQAMKEQAQLREEMALHYKLGNSEAAAAIQRRLDPDVAM 418
QV+ALK SMQ+GMAQAMKEQAQLREEMA YKLGN EAAAAIQRRLDPD A+
Sbjct: 329 QVMALKHSMQTGMAQAMKEQAQLREEMAYQYKLGNFEAAAAIQRRLDPDAAI 380
>ref|XP_003539593.1| PREDICTED: uncharacterized protein LOC100808770 [Glycine max]
Length = 378
Score = 208 bits (530), Expect(2) = 5e-70
Identities = 98/121 (80%), Positives = 110/121 (90%), Gaps = 1/121 (0%)
Frame = -3
Query: 1001 AVTNSWGKYGIIREIDMWNKRPEFTAWLLEVKQVNLESLPNWEEKQMFKQFMEDHNTATF 822
AVTNSWGKYG+IRE DMW KRPEFTAWL EVKQVNLE++ NWEEKQMFK+FMEDHNTATF
Sbjct: 212 AVTNSWGKYGVIRETDMWTKRPEFTAWLAEVKQVNLENMSNWEEKQMFKEFMEDHNTATF 271
Query: 821 PSKKYYDLDAYHKRKMEKEMKKGY-KILETERTVFNDEEQRRHELMLAREKQKEEQVVAL 645
PSKKYY+LDAY++ +MEKEMKKG+ K+ TERTVFNDEEQRR EL+ AREK KEEQV+AL
Sbjct: 272 PSKKYYNLDAYYRHQMEKEMKKGFKKVQATERTVFNDEEQRRQELLQAREKHKEEQVMAL 331
Query: 644 K 642
K
Sbjct: 332 K 332
Score = 84.7 bits (208), Expect(2) = 5e-70
Identities = 43/52 (82%), Positives = 46/52 (88%)
Frame = -2
Query: 573 QVVALKRSMQSGMAQAMKEQAQLREEMALHYKLGNSEAAAAIQRRLDPDVAM 418
QV+ALK SMQ+GMAQAMKEQ QLREEMA YKLGN EAAAAIQRRLDPD A+
Sbjct: 327 QVMALKHSMQTGMAQAMKEQTQLREEMAYQYKLGNFEAAAAIQRRLDPDAAI 378
>emb|CBI20322.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 202 bits (514), Expect(2) = 7e-70
Identities = 98/121 (80%), Positives = 107/121 (88%), Gaps = 1/121 (0%)
Frame = -3
Query: 1001 AVTNSWGKYGIIREIDMWNKRPEFTAWLLEVKQVNLESLPNWEEKQMFKQFMEDHNTATF 822
AVTNSWGKYGIIRE DMWNKRPEFTAWL E+KQVNLESLPNWEEKQMFK+FMEDHNTATF
Sbjct: 521 AVTNSWGKYGIIRESDMWNKRPEFTAWLAEIKQVNLESLPNWEEKQMFKEFMEDHNTATF 580
Query: 821 PSKKYYDLDAYHKRKMEKEMKKG-YKILETERTVFNDEEQRRHELMLAREKQKEEQVVAL 645
SKKYY++DAY+++KME+EMKKG K LETERTVFNDEEQRR EL RE+ KE QV L
Sbjct: 581 TSKKYYNIDAYYRQKMEREMKKGSKKALETERTVFNDEEQRRLELQRERERYKEVQVEEL 640
Query: 644 K 642
K
Sbjct: 641 K 641
Score = 90.5 bits (223), Expect(2) = 7e-70
Identities = 47/52 (90%), Positives = 48/52 (92%)
Frame = -2
Query: 573 QVVALKRSMQSGMAQAMKEQAQLREEMALHYKLGNSEAAAAIQRRLDPDVAM 418
QV LKRSMQSGMAQAMKEQAQLREEMA YK+GNSEAAAAIQRRLDPDVAM
Sbjct: 636 QVEELKRSMQSGMAQAMKEQAQLREEMAYQYKVGNSEAAAAIQRRLDPDVAM 687