BLASTX nr result

ID: Coptis24_contig00013107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013107
         (1960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527602.1| nucleic acid binding protein, putative [Rici...   219   1e-72
ref|XP_002316904.1| predicted protein [Populus trichocarpa] gi|2...   213   6e-72
ref|XP_003543245.1| PREDICTED: uncharacterized protein LOC100778...   210   6e-71
ref|XP_003539593.1| PREDICTED: uncharacterized protein LOC100808...   208   5e-70
emb|CBI20322.3| unnamed protein product [Vitis vinifera]              202   7e-70

>ref|XP_002527602.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223533019|gb|EEF34783.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 327

 Score =  219 bits (557), Expect(2) = 1e-72
 Identities = 104/124 (83%), Positives = 115/124 (92%), Gaps = 1/124 (0%)
 Frame = -3

Query: 1001 AVTNSWGKYGIIREIDMWNKRPEFTAWLLEVKQVNLESLPNWEEKQMFKQFMEDHNTATF 822
            AVT+SWGKYG+IRE DMWNKRPEFTAWL EVKQVNLESLPNWEEKQMFK+FMEDHNTATF
Sbjct: 161  AVTDSWGKYGVIRETDMWNKRPEFTAWLAEVKQVNLESLPNWEEKQMFKEFMEDHNTATF 220

Query: 821  PSKKYYDLDAYHKRKMEKEMKKGY-KILETERTVFNDEEQRRHELMLAREKQKEEQVVAL 645
            PSKKYY+LDAY+KR+MEKEMKKG+ K  ETERTVFNDEEQRR ELM AREKQKE++V AL
Sbjct: 221  PSKKYYNLDAYYKRQMEKEMKKGFKKFQETERTVFNDEEQRRQELMRAREKQKEQEVEAL 280

Query: 644  KLPL 633
            K+ +
Sbjct: 281  KISM 284



 Score = 83.2 bits (204), Expect(2) = 1e-72
 Identities = 43/52 (82%), Positives = 45/52 (86%)
 Frame = -2

Query: 573 QVVALKRSMQSGMAQAMKEQAQLREEMALHYKLGNSEAAAAIQRRLDPDVAM 418
           +V ALK SMQSGMAQAMKEQ QLREEMA  YKLGN EAAAAIQRRLDPD+ M
Sbjct: 276 EVEALKISMQSGMAQAMKEQTQLREEMAYQYKLGNFEAAAAIQRRLDPDIPM 327


>ref|XP_002316904.1| predicted protein [Populus trichocarpa] gi|222859969|gb|EEE97516.1|
            predicted protein [Populus trichocarpa]
          Length = 288

 Score =  213 bits (541), Expect(2) = 6e-72
 Identities = 101/121 (83%), Positives = 111/121 (91%), Gaps = 1/121 (0%)
 Frame = -3

Query: 1001 AVTNSWGKYGIIREIDMWNKRPEFTAWLLEVKQVNLESLPNWEEKQMFKQFMEDHNTATF 822
            AVTNSWGKYGIIRE DMWNKRPEFTAWL EVKQVNLE+LPNWEEKQMFKQFMEDHNTATF
Sbjct: 122  AVTNSWGKYGIIRETDMWNKRPEFTAWLAEVKQVNLETLPNWEEKQMFKQFMEDHNTATF 181

Query: 821  PSKKYYDLDAYHKRKMEKEMKKGY-KILETERTVFNDEEQRRHELMLAREKQKEEQVVAL 645
            PSKKYY+LDAY++ KMEKE+KKG+ K++ +ERTVFNDEEQRR ELM  REKQKE +V AL
Sbjct: 182  PSKKYYNLDAYYQHKMEKELKKGFKKVMASERTVFNDEEQRRQELMREREKQKEAEVEAL 241

Query: 644  K 642
            K
Sbjct: 242  K 242



 Score = 87.0 bits (214), Expect(2) = 6e-72
 Identities = 46/52 (88%), Positives = 47/52 (90%)
 Frame = -2

Query: 573 QVVALKRSMQSGMAQAMKEQAQLREEMALHYKLGNSEAAAAIQRRLDPDVAM 418
           +V ALK SMQSGMAQAMKEQAQLREEMA  YKLGN EAAAAIQRRLDPDVAM
Sbjct: 237 EVEALKCSMQSGMAQAMKEQAQLREEMAYQYKLGNFEAAAAIQRRLDPDVAM 288


>ref|XP_003543245.1| PREDICTED: uncharacterized protein LOC100778706 [Glycine max]
          Length = 380

 Score =  210 bits (534), Expect(2) = 6e-71
 Identities = 98/121 (80%), Positives = 111/121 (91%), Gaps = 1/121 (0%)
 Frame = -3

Query: 1001 AVTNSWGKYGIIREIDMWNKRPEFTAWLLEVKQVNLESLPNWEEKQMFKQFMEDHNTATF 822
            AVTNSWGKYG+IRE DMW KRPEFTAWL EVKQVNLE++ NWEEKQMFK+FMEDHNTATF
Sbjct: 214  AVTNSWGKYGVIRETDMWTKRPEFTAWLAEVKQVNLENMSNWEEKQMFKEFMEDHNTATF 273

Query: 821  PSKKYYDLDAYHKRKMEKEMKKGY-KILETERTVFNDEEQRRHELMLAREKQKEEQVVAL 645
            PSKKYY+LDAY++R+MEKEMKKG+ K+  TERT+FNDEEQRR EL+ AREK KEEQV+AL
Sbjct: 274  PSKKYYNLDAYYRREMEKEMKKGFKKVQATERTIFNDEEQRRQELLQAREKHKEEQVMAL 333

Query: 644  K 642
            K
Sbjct: 334  K 334



 Score = 86.3 bits (212), Expect(2) = 6e-71
 Identities = 44/52 (84%), Positives = 47/52 (90%)
 Frame = -2

Query: 573 QVVALKRSMQSGMAQAMKEQAQLREEMALHYKLGNSEAAAAIQRRLDPDVAM 418
           QV+ALK SMQ+GMAQAMKEQAQLREEMA  YKLGN EAAAAIQRRLDPD A+
Sbjct: 329 QVMALKHSMQTGMAQAMKEQAQLREEMAYQYKLGNFEAAAAIQRRLDPDAAI 380


>ref|XP_003539593.1| PREDICTED: uncharacterized protein LOC100808770 [Glycine max]
          Length = 378

 Score =  208 bits (530), Expect(2) = 5e-70
 Identities = 98/121 (80%), Positives = 110/121 (90%), Gaps = 1/121 (0%)
 Frame = -3

Query: 1001 AVTNSWGKYGIIREIDMWNKRPEFTAWLLEVKQVNLESLPNWEEKQMFKQFMEDHNTATF 822
            AVTNSWGKYG+IRE DMW KRPEFTAWL EVKQVNLE++ NWEEKQMFK+FMEDHNTATF
Sbjct: 212  AVTNSWGKYGVIRETDMWTKRPEFTAWLAEVKQVNLENMSNWEEKQMFKEFMEDHNTATF 271

Query: 821  PSKKYYDLDAYHKRKMEKEMKKGY-KILETERTVFNDEEQRRHELMLAREKQKEEQVVAL 645
            PSKKYY+LDAY++ +MEKEMKKG+ K+  TERTVFNDEEQRR EL+ AREK KEEQV+AL
Sbjct: 272  PSKKYYNLDAYYRHQMEKEMKKGFKKVQATERTVFNDEEQRRQELLQAREKHKEEQVMAL 331

Query: 644  K 642
            K
Sbjct: 332  K 332



 Score = 84.7 bits (208), Expect(2) = 5e-70
 Identities = 43/52 (82%), Positives = 46/52 (88%)
 Frame = -2

Query: 573 QVVALKRSMQSGMAQAMKEQAQLREEMALHYKLGNSEAAAAIQRRLDPDVAM 418
           QV+ALK SMQ+GMAQAMKEQ QLREEMA  YKLGN EAAAAIQRRLDPD A+
Sbjct: 327 QVMALKHSMQTGMAQAMKEQTQLREEMAYQYKLGNFEAAAAIQRRLDPDAAI 378


>emb|CBI20322.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  202 bits (514), Expect(2) = 7e-70
 Identities = 98/121 (80%), Positives = 107/121 (88%), Gaps = 1/121 (0%)
 Frame = -3

Query: 1001 AVTNSWGKYGIIREIDMWNKRPEFTAWLLEVKQVNLESLPNWEEKQMFKQFMEDHNTATF 822
            AVTNSWGKYGIIRE DMWNKRPEFTAWL E+KQVNLESLPNWEEKQMFK+FMEDHNTATF
Sbjct: 521  AVTNSWGKYGIIRESDMWNKRPEFTAWLAEIKQVNLESLPNWEEKQMFKEFMEDHNTATF 580

Query: 821  PSKKYYDLDAYHKRKMEKEMKKG-YKILETERTVFNDEEQRRHELMLAREKQKEEQVVAL 645
             SKKYY++DAY+++KME+EMKKG  K LETERTVFNDEEQRR EL   RE+ KE QV  L
Sbjct: 581  TSKKYYNIDAYYRQKMEREMKKGSKKALETERTVFNDEEQRRLELQRERERYKEVQVEEL 640

Query: 644  K 642
            K
Sbjct: 641  K 641



 Score = 90.5 bits (223), Expect(2) = 7e-70
 Identities = 47/52 (90%), Positives = 48/52 (92%)
 Frame = -2

Query: 573 QVVALKRSMQSGMAQAMKEQAQLREEMALHYKLGNSEAAAAIQRRLDPDVAM 418
           QV  LKRSMQSGMAQAMKEQAQLREEMA  YK+GNSEAAAAIQRRLDPDVAM
Sbjct: 636 QVEELKRSMQSGMAQAMKEQAQLREEMAYQYKVGNSEAAAAIQRRLDPDVAM 687


Top