BLASTX nr result

ID: Coptis24_contig00013104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013104
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA18106.1| hAT-like transposase [Capsella rubella]                 82   6e-14
ref|NP_001062550.1| Os09g0101200 [Oryza sativa Japonica Group] g...    80   2e-13
ref|NP_189803.1| BED zinc finger and hAT dimerization domain-con...    79   3e-13
gb|AAW28145.1| hAT-like transposase [Arabidopsis thaliana]             79   3e-13
gb|ABA18109.1| hAT-like transposase [Arabidopsis arenosa]              77   1e-12

>gb|ABA18106.1| hAT-like transposase [Capsella rubella]
          Length = 665

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 37/76 (48%), Positives = 49/76 (64%)
 Frame = -2

Query: 306 FNVLDWWKAQSGNYPNLSAMARDLLTVPVSAVPLEYAFDRRERMMNQSWSYLPPELLEAS 127
           F+VLDWWK     YP LS MARD+L++PVSA   +Y FD   R M++  + L PE +EA 
Sbjct: 579 FDVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEAL 638

Query: 126 LCLKDWYLAKEGSQDA 79
           +C K+W L K+ S  A
Sbjct: 639 ICAKEWLLEKDASSAA 654


>ref|NP_001062550.1| Os09g0101200 [Oryza sativa Japonica Group]
           gi|113630783|dbj|BAF24464.1| Os09g0101200 [Oryza sativa
           Japonica Group]
          Length = 501

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/80 (45%), Positives = 49/80 (61%)
 Frame = -2

Query: 306 FNVLDWWKAQSGNYPNLSAMARDLLTVPVSAVPLEYAFDRRERMMNQSWSYLPPELLEAS 127
           F+VL WWK  +  YP LS MARD L +PVS V  E AF    R++ +  + + PE LEAS
Sbjct: 411 FDVLSWWKRNADVYPTLSLMARDFLAIPVSTVSSESAFSAAGRLLGKDRTSMSPETLEAS 470

Query: 126 LCLKDWYLAKEGSQDAYSNE 67
           +CLKDW +  +  +  Y+ E
Sbjct: 471 ICLKDWIIGFDDDEKGYATE 490


>ref|NP_189803.1| BED zinc finger and hAT dimerization domain-containing protein
           [Arabidopsis thaliana] gi|6735290|emb|CAB68118.1|
           putative transposase [Arabidopsis thaliana]
           gi|27808618|gb|AAO24589.1| At3g42170 [Arabidopsis
           thaliana] gi|110743590|dbj|BAE99632.1| putative
           transposase [Arabidopsis thaliana]
           gi|332644207|gb|AEE77728.1| BED zinc finger and hAT
           dimerization domain-containing protein [Arabidopsis
           thaliana]
          Length = 696

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 36/84 (42%), Positives = 50/84 (59%)
 Frame = -2

Query: 306 FNVLDWWKAQSGNYPNLSAMARDLLTVPVSAVPLEYAFDRRERMMNQSWSYLPPELLEAS 127
           F+VLDWWK     YP LS MARD+L++PVSA   +Y FD   R M++  + L PE +EA 
Sbjct: 608 FDVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEAL 667

Query: 126 LCLKDWYLAKEGSQDAYSNEIADT 55
           +C ++W L    S  A +   + T
Sbjct: 668 ICAREWLLESNASSSAAAQNASAT 691


>gb|AAW28145.1| hAT-like transposase [Arabidopsis thaliana]
          Length = 696

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 36/84 (42%), Positives = 50/84 (59%)
 Frame = -2

Query: 306 FNVLDWWKAQSGNYPNLSAMARDLLTVPVSAVPLEYAFDRRERMMNQSWSYLPPELLEAS 127
           F+VLDWWK     YP LS MARD+L++PVSA   +Y FD   R M++  + L PE +EA 
Sbjct: 608 FDVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEAL 667

Query: 126 LCLKDWYLAKEGSQDAYSNEIADT 55
           +C ++W L    S  A +   + T
Sbjct: 668 ICAREWLLESNASSSAAAQNASAT 691


>gb|ABA18109.1| hAT-like transposase [Arabidopsis arenosa]
          Length = 654

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 35/76 (46%), Positives = 47/76 (61%)
 Frame = -2

Query: 306 FNVLDWWKAQSGNYPNLSAMARDLLTVPVSAVPLEYAFDRRERMMNQSWSYLPPELLEAS 127
           F+VLDWWK     YP LS MARD+L++PVSA   +Y FD   R M++  + L PE +EA 
Sbjct: 567 FDVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEAL 626

Query: 126 LCLKDWYLAKEGSQDA 79
           +C ++W L    S  A
Sbjct: 627 ICAREWLLENASSSAA 642


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