BLASTX nr result

ID: Coptis24_contig00013098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013098
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526556.1| hypothetical protein RCOM_0542810 [Ricinus c...    87   1e-15
emb|CBI37174.3| unnamed protein product [Vitis vinifera]               82   5e-14
ref|XP_002321291.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002863617.1| hypothetical protein ARALYDRAFT_494595 [Arab...    64   1e-08
ref|NP_199214.2| uncharacterized protein [Arabidopsis thaliana] ...    57   1e-06

>ref|XP_002526556.1| hypothetical protein RCOM_0542810 [Ricinus communis]
           gi|223534117|gb|EEF35834.1| hypothetical protein
           RCOM_0542810 [Ricinus communis]
          Length = 406

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 38/58 (65%), Positives = 47/58 (81%)
 Frame = +1

Query: 127 GIVGYLIALLSNQLNQLWKVSPILAAIAIPLWCPLFKLYMLEIETQFKGDSSTIRCCS 300
           GI+ YL  +L  QL+QLW +SP+L AIAIP W PLF+LY+ EI+TQFKGDSS +RCCS
Sbjct: 335 GILEYLAGVLDGQLHQLWNLSPVLLAIAIPFWSPLFRLYLSEIQTQFKGDSSVMRCCS 392


>emb|CBI37174.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 37/59 (62%), Positives = 46/59 (77%)
 Frame = +1

Query: 124 HGIVGYLIALLSNQLNQLWKVSPILAAIAIPLWCPLFKLYMLEIETQFKGDSSTIRCCS 300
           + I+ YL  L+   L+QLWK+SP+LAA AIP W PLF+LY+ +I TQFKG SSTIRCCS
Sbjct: 443 NAILEYLNVLVGGDLHQLWKLSPVLAAFAIPSWSPLFRLYLSDIHTQFKGCSSTIRCCS 501


>ref|XP_002321291.1| predicted protein [Populus trichocarpa] gi|222862064|gb|EEE99606.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/54 (62%), Positives = 40/54 (74%)
 Frame = +1

Query: 130 IVGYLIALLSNQLNQLWKVSPILAAIAIPLWCPLFKLYMLEIETQFKGDSSTIR 291
           I+ YL  L   QL+ LWK SP+LAA+AIP W PL +LY+ EIETQFKGDSS  R
Sbjct: 379 ILEYLARLQGYQLSLLWKQSPVLAAVAIPSWSPLLRLYLGEIETQFKGDSSAQR 432


>ref|XP_002863617.1| hypothetical protein ARALYDRAFT_494595 [Arabidopsis lyrata subsp.
           lyrata] gi|297309452|gb|EFH39876.1| hypothetical protein
           ARALYDRAFT_494595 [Arabidopsis lyrata subsp. lyrata]
          Length = 357

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/57 (54%), Positives = 37/57 (64%)
 Frame = +1

Query: 130 IVGYLIALLSNQLNQLWKVSPILAAIAIPLWCPLFKLYMLEIETQFKGDSSTIRCCS 300
           I+ YL  +L ++L+ LWK+   L A AIP W PLF LY  EIE Q K D ST RCCS
Sbjct: 272 ILEYLTEILESRLHHLWKLPSALTAAAIPSWSPLFGLYFGEIEKQLKLDHSTTRCCS 328


>ref|NP_199214.2| uncharacterized protein [Arabidopsis thaliana]
           gi|332007665|gb|AED95048.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 357

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/57 (50%), Positives = 35/57 (61%)
 Frame = +1

Query: 130 IVGYLIALLSNQLNQLWKVSPILAAIAIPLWCPLFKLYMLEIETQFKGDSSTIRCCS 300
           I+ YL  +L ++ +QLWK+   L A AIP W PLF LY   IE Q K D ST R CS
Sbjct: 272 ILEYLTEILESRFHQLWKLPSALTAAAIPSWSPLFGLYFGGIEKQLKLDHSTTRFCS 328


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