BLASTX nr result

ID: Coptis24_contig00013095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013095
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322764.1| white-brown-complex ABC transporter family [...   219   1e-55
ref|XP_003519092.1| PREDICTED: ABC transporter G family member 2...   215   3e-54
gb|ACU17386.1| unknown [Glycine max]                                  215   3e-54
ref|XP_003535833.1| PREDICTED: ABC transporter G family member 2...   215   3e-54
ref|XP_002524100.1| ATP-binding cassette transporter, putative [...   211   4e-53

>ref|XP_002322764.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222867394|gb|EEF04525.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 744

 Score =  219 bits (559), Expect = 1e-55
 Identities = 114/144 (79%), Positives = 117/144 (81%)
 Frame = +3

Query: 3   LFLDEPTSGLDSTTALRIVQMLHDIAEDGKTVVTTIHQPSSRLFHXXXXXXXXXXXXXXX 182
           LFLDEPTSGLDSTTALRIVQ+L DIAE GKTVVTTIHQPSSRLFH               
Sbjct: 317 LFLDEPTSGLDSTTALRIVQLLQDIAEGGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLY 376

Query: 183 XXXASEASVYFSSIGCTPLIAMNPAEFLLDLANGNINDVSVPSELEDKVQTGNLETETRN 362
              ASEA +YFSSIGC PLIAMNPAEFLLDLANGNINDVSVPSELEDKVQ GN E ETRN
Sbjct: 377 FGKASEAMLYFSSIGCNPLIAMNPAEFLLDLANGNINDVSVPSELEDKVQIGNSEAETRN 436

Query: 363 GKPSPMVVHEYLVEAYETRVAENE 434
           GKPSP VVHEYLVEAYETRVA+ E
Sbjct: 437 GKPSPAVVHEYLVEAYETRVADKE 460


>ref|XP_003519092.1| PREDICTED: ABC transporter G family member 22-like [Glycine max]
          Length = 743

 Score =  215 bits (548), Expect = 3e-54
 Identities = 112/144 (77%), Positives = 115/144 (79%)
 Frame = +3

Query: 3   LFLDEPTSGLDSTTALRIVQMLHDIAEDGKTVVTTIHQPSSRLFHXXXXXXXXXXXXXXX 182
           LFLDEPTSGLDSTTALRIVQML DIAE GKTVVTTIHQPSSRLFH               
Sbjct: 314 LFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLY 373

Query: 183 XXXASEASVYFSSIGCTPLIAMNPAEFLLDLANGNINDVSVPSELEDKVQTGNLETETRN 362
              ASEA  YF SIGC+PLI+MNPAEFLLDLANGNINDVS+PSELEDKVQ GN E ET N
Sbjct: 374 FGKASEAMTYFQSIGCSPLISMNPAEFLLDLANGNINDVSLPSELEDKVQMGNAEAETLN 433

Query: 363 GKPSPMVVHEYLVEAYETRVAENE 434
           GKPSP VVHEYLVEAYETRVAE E
Sbjct: 434 GKPSPAVVHEYLVEAYETRVAETE 457


>gb|ACU17386.1| unknown [Glycine max]
          Length = 219

 Score =  215 bits (548), Expect = 3e-54
 Identities = 112/144 (77%), Positives = 115/144 (79%)
 Frame = +3

Query: 3   LFLDEPTSGLDSTTALRIVQMLHDIAEDGKTVVTTIHQPSSRLFHXXXXXXXXXXXXXXX 182
           LFLDEPTSGLDSTTALRIVQML DIAE GKTVVTTIHQPSSRLFH               
Sbjct: 31  LFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLY 90

Query: 183 XXXASEASVYFSSIGCTPLIAMNPAEFLLDLANGNINDVSVPSELEDKVQTGNLETETRN 362
              ASEA  YF SIGC+PLI+MNPAEFLLDLANGNINDVS+PSELEDKVQ GN E ET N
Sbjct: 91  FGKASEAMTYFQSIGCSPLISMNPAEFLLDLANGNINDVSLPSELEDKVQMGNAEAETLN 150

Query: 363 GKPSPMVVHEYLVEAYETRVAENE 434
           GKPSP VVHEYLVEAYETRVAE E
Sbjct: 151 GKPSPAVVHEYLVEAYETRVAETE 174


>ref|XP_003535833.1| PREDICTED: ABC transporter G family member 22-like [Glycine max]
          Length = 738

 Score =  215 bits (547), Expect = 3e-54
 Identities = 111/144 (77%), Positives = 115/144 (79%)
 Frame = +3

Query: 3   LFLDEPTSGLDSTTALRIVQMLHDIAEDGKTVVTTIHQPSSRLFHXXXXXXXXXXXXXXX 182
           LFLDEPTSGLDSTTALRIVQML DIAE GKTVVTTIHQPSSRLFH               
Sbjct: 309 LFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLY 368

Query: 183 XXXASEASVYFSSIGCTPLIAMNPAEFLLDLANGNINDVSVPSELEDKVQTGNLETETRN 362
              ASE   YF SIGC+PLI+MNPAEFLLDLANGNINDVS+PSELEDKVQ GN E ET+N
Sbjct: 369 FGKASETMTYFQSIGCSPLISMNPAEFLLDLANGNINDVSLPSELEDKVQMGNAEAETQN 428

Query: 363 GKPSPMVVHEYLVEAYETRVAENE 434
           GKPSP VVHEYLVEAYETRVAE E
Sbjct: 429 GKPSPAVVHEYLVEAYETRVAETE 452


>ref|XP_002524100.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223536668|gb|EEF38310.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 749

 Score =  211 bits (538), Expect = 4e-53
 Identities = 111/144 (77%), Positives = 114/144 (79%)
 Frame = +3

Query: 3   LFLDEPTSGLDSTTALRIVQMLHDIAEDGKTVVTTIHQPSSRLFHXXXXXXXXXXXXXXX 182
           LFLDEPTSGLDSTTALRIVQML DIAE GKTVVTTIHQPSSRLFH               
Sbjct: 319 LFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLY 378

Query: 183 XXXASEASVYFSSIGCTPLIAMNPAEFLLDLANGNINDVSVPSELEDKVQTGNLETETRN 362
              ASE   YFSSIGC PLIAMNPAEFLLDLANGNINDVSVPSELED+VQ GN + +T N
Sbjct: 379 FGKASETMPYFSSIGCNPLIAMNPAEFLLDLANGNINDVSVPSELEDRVQMGNSDIDTGN 438

Query: 363 GKPSPMVVHEYLVEAYETRVAENE 434
           GKPSP VVHEYLVEAYETRVAE E
Sbjct: 439 GKPSPSVVHEYLVEAYETRVAEME 462


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