BLASTX nr result
ID: Coptis24_contig00013088
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00013088
(2543 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002532555.1| conserved hypothetical protein [Ricinus comm... 252 4e-64
dbj|BAD09445.1| hypothetical protein [Oryza sativa Japonica Grou... 227 1e-56
dbj|BAD08729.1| F-box protein family-like [Oryza sativa Japonica... 225 4e-56
dbj|BAD08724.1| F-box protein family-like [Oryza sativa Japonica... 216 2e-53
gb|EEC83661.1| hypothetical protein OsI_29429 [Oryza sativa Indi... 154 1e-34
>ref|XP_002532555.1| conserved hypothetical protein [Ricinus communis]
gi|223527710|gb|EEF29816.1| conserved hypothetical
protein [Ricinus communis]
Length = 690
Score = 252 bits (643), Expect = 4e-64
Identities = 198/714 (27%), Positives = 334/714 (46%), Gaps = 20/714 (2%)
Frame = -2
Query: 2296 EKPLRLVPPTYA---PSLVFCHGKKFRNQTFCTICDGSYH-VRSVPEMRQMSCVASCCGW 2129
++P PP A P LV+CHGK +QTF TI D +R +PE+ C AS GW
Sbjct: 8 KRPEHERPPAPAGPYPWLVYCHGKGREDQTFWTISDPKRTALRRIPELDSKICWASSHGW 67
Query: 2128 LILKSYYSIQCYLFNPVSLKKIILPPL-IDNTFDVGILTYPPSDPNCVVMLVSQKRRLCT 1952
+L+NP++L+KI LP L + N G ++ P + C ++L
Sbjct: 68 CFFSDRARRHFFLWNPLTLEKIDLPDLQVYNIISSGYISSSPRETGCKILLFVGDHPSIM 127
Query: 1951 FCRIGDTKWIEQELVRKFKSKKRIGMPKKYISSVVSCKGKVYLFFFGGVTVVNFYDSC-- 1778
F +GD +W E + F ++ + V C GK+Y+F + + + D
Sbjct: 128 FLELGDKEWTEIDY--SFLQTGKVVEYDHILRDPVYCNGKLYVFSYLTNSAIFVLDEINK 185
Query: 1777 ASIKTSEMKWNKCSIPGAIRTTHF---YVESCGEIFQVNQIHLMLSREIFLTFDIFKLDL 1607
+ + +I + + +F +VE+ GEI+ +N + + + ++ K+D
Sbjct: 186 GGVVLRSLNVEYQNIMSQLESLNFRRCFVEASGEIYGINILLGGYDSRV-VDIEVRKIDF 244
Query: 1606 STMDWVKVESLGDRIFXXXXXXXXXXSGAELGVKGNCVYYSIPNYAHLYRFDMDDGAITV 1427
S M W KVE + D + ++GN +Y+ + ++ LY + ++D +I++
Sbjct: 245 SRMAWEKVECVKDSVLFLDDHYSISCPEIRPEIQGNRLYFVLKDHK-LYSYSIEDRSISL 303
Query: 1426 TLP-LPNVLNYWKGPF---WMVPDCXXXXXXXXXXXXXXKSVV--IEERNNWKELQTELL 1265
P LP + PF W++PD I + + L ++++
Sbjct: 304 VSPYLP------EDPFLSFWVMPDLRDYAGSRNREEIDACGEKQEIHQEAYFHRLPSDVI 357
Query: 1264 -ELIFSRLYLGDCIRFRLTCKAWISTTQLIRTHPCLTQPDSRCQEIPWLLSFQRNNKGIC 1088
LI RL L + R TC + S I+ CL S P L+ F+++N IC
Sbjct: 358 TSLIIKRLNLVHYLNLRTTCSLFRSLAPPIQQKLCLQNHSSS----PRLMFFEKDN--IC 411
Query: 1087 NFCHPIYNDAYVMNIPE-LAGAIVRHAKHGWLLVSQGDHSIFFFNPVTKDIIKLPDLPRS 911
F P +D +++P+ LAG + ++K GW ++S+G + + FNP+T +I+K D
Sbjct: 412 TFFEPKNSDKCYLHLPQQLAGCQICYSKDGWFMMSRGKNFFYCFNPLTGEILKFTDTTSV 471
Query: 910 -SYSFTNISFSTPPTTSDCVVFGHKESHEVFVEMLIYSKEIDIDTWSEFYIDSKVPYEFI 734
+ FST PT+SDC+ + + + IY W ID + F
Sbjct: 472 LELELICVGFSTSPTSSDCIAVTISKLNNLIE---IYFAFRGDTKWVLEQIDDDTDFTFG 528
Query: 733 ASYCNPIFYDGVFYCLSKDGKLGILRPLEREDNELMWKVLPVPAVISYSDMEIYETPI-S 557
+ +P+FY+GVFY L + G L IL + D+ + W+VL D++ +
Sbjct: 529 GN--SPVFYNGVFYYLGEKGNLAILEII---DDMVTWEVL--------WDLKSPRSHCHQ 575
Query: 556 SYIVECDGEILSVFMGIVGKPVSVFKLDVSKMKWVTLATLGDKVIFLSHATSLLVPAGLK 377
+++VECDG +LSVF+G V VF+L SKM W+ + LG+ ++ +S ++S A
Sbjct: 576 NFLVECDGNLLSVFVGEFEGSVEVFRLSQSKMVWIRVENLGNYMVCVSRSSSFSSLAKAP 635
Query: 376 GTEDRIYLPKFRGNDIVFYSLRTGNYHSFGDNSDKDSRADWINTREHWNCTWIQ 215
G E++I+ P+F G +IVFYSL T +HSF + ++ +RE C W +
Sbjct: 636 GMENKIFFPRFYGENIVFYSLDTNKFHSF---DRQKIPIEFYISREQLRCGWFE 686
>dbj|BAD09445.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125603599|gb|EAZ42924.1| hypothetical protein
OsJ_27514 [Oryza sativa Japonica Group]
Length = 760
Score = 227 bits (578), Expect = 1e-56
Identities = 202/767 (26%), Positives = 311/767 (40%), Gaps = 91/767 (11%)
Frame = -2
Query: 2218 TFCTICDGSYHVRSVPEMRQMSCVASCCG--WLILKSYYSIQCYLFNPVSLKKIILPPLI 2045
+F I D S HVR VP+++ C+ G WL++ + C+LF + I LPPL
Sbjct: 34 SFVDILDRSLHVRVVPDLQGKLCLGCVHGGDWLLMVDEITGGCFLFCLSNSSTISLPPLR 93
Query: 2044 DNTFDVG---ILTYPPSDPNCVVMLVS---QKRRLCTFCRIGDTKWIEQELVRKFKSKKR 1883
+ D+G +L P + +C V++ S + C GD +W + L+ S +
Sbjct: 94 EPLGDMGACVVLGSSPLNRDCTVVITSLPEPEESFLLHCHPGDEEWTK--LMVPLGSDRL 151
Query: 1882 IGMPKKYISSVVSCKGKVY-LFFFGGVTVVNFYDSCASIKTSEMKWNKCSIPGAIRTTHF 1706
G +V+C G++Y L F + ++ D K ++W +
Sbjct: 152 FG-------KLVNCAGQLYSLSSFRKLLTIDVIDDALHAKILNIEWESSC---GHNFEPY 201
Query: 1705 YVESCGEIFQVNQIHLMLSREIFLT-FDIFKLDLSTMDWVKVESLG-DRIFXXXXXXXXX 1532
VESCG++F V L +++LD + KV+ +G DR F
Sbjct: 202 IVESCGKLFVVLASLYGYPYNCPLNGVSVYRLDRAESMLKKVDDIGTDRAFLISGHYGFS 261
Query: 1531 XSGAELGVKGNCVYYSIPNY--AHLYRFDMDDGAITVTLPLPNVLNYWKGPFWMVPDCXX 1358
+ E V+GNCVY Y +Y+F +DD I++ L + + FW VP
Sbjct: 262 CTAMEGLVQGNCVYIVWSGYDCERIYKFCLDDMTISLQPILAHPTEDLRRGFWSVPAGIE 321
Query: 1357 XXXXXXXXXXXXKSVVIEERNN--------------WKELQTELLELIFSRLYLGDCIRF 1220
+ NN W++L E+LELI S L L D +RF
Sbjct: 322 ATELVQSAPSIHCDTEVNVLNNFNKDEDAQATIKASWQDLPIEMLELIVSNLSLVDRLRF 381
Query: 1219 RLTCKAWISTTQLIRTHPCLTQPDSRCQEIPWLLSFQRNNKGICNFCHPIYNDAYVMNIP 1040
CK W S ++ P ++ + PWL+ R + G C P+ Y M +
Sbjct: 382 PSVCKQWSS----------VSNPVAQAKVWPWLMHCVRQD-GACKMFDPLCGVEYSMKVG 430
Query: 1039 ELAG---AIVRHAKHGWLLVSQGDHSIFFFNPVTKDIIKLPDLPRSSYSFTNISFSTPPT 869
R +K GW++V+Q D +IF NP TK+I+KL + Y FT ISFS+ PT
Sbjct: 431 PFDANERQAFRFSKDGWVIVTQSDDNIFVINPFTKEIVKL-SMASGWYRFTGISFSSVPT 489
Query: 868 TSDCVVFG--------------------HKESHEVFVE-------------MLIYSKEID 788
+ DCV G E +E++ E + Y +E D
Sbjct: 490 SPDCVFLGVCSSPKGDGIKVWTCRPNEEETEDNEIYYEEETEDEERDSEENEINYEEEAD 549
Query: 787 IDT--------------------------WSEFYIDSKVPYEFIASYCNPIFYDGVFYCL 686
D WSEF ++ F + NP+++ G FY L
Sbjct: 550 QDEEREAEENEINYNEEAEDEESETEEDYWSEFDFEND-EVMFPVARNNPVYFRGEFYFL 608
Query: 685 SKDGKLGILRPLEREDNELMWKVLPVPAVISYSDMEIYETPISSYIVECDGEILSVFMGI 506
+ G L + P E W++L P I E + Y+VE GE+++VF
Sbjct: 609 GQRGNLSVFNPGNNE-----WRILDKPEPIRADLTPYDEGKEACYMVELRGELIAVFHRN 663
Query: 505 VGKPVSVFKLDVSKMKWVTLATLGDKVIFLSHATSLLVPAGLKGTEDRIYLPKFR--GND 332
+P V KLD SKM+WV + +G +FL + S+ +P+ G +RIY PKF G
Sbjct: 664 ANEPPRVLKLDESKMEWVEIEDIGGGALFLDYRASIALPSSEAGHGNRIYFPKFSEDGKK 723
Query: 331 IVFYSLRTGNYHSFGDNSDKDSRADWINTREHWNCTWIQSNMEN*YY 191
+FY L Y + +E NC W +++ Y
Sbjct: 724 AIFYDLEAKKYSPM-----------FYGAKEPMNCVWFVPKLQSDEY 759
>dbj|BAD08729.1| F-box protein family-like [Oryza sativa Japonica Group]
gi|125603604|gb|EAZ42929.1| hypothetical protein
OsJ_27518 [Oryza sativa Japonica Group]
Length = 710
Score = 225 bits (574), Expect = 4e-56
Identities = 201/743 (27%), Positives = 311/743 (41%), Gaps = 52/743 (6%)
Frame = -2
Query: 2278 VPPTYAPSLVFCHGKKFRNQTFCTICDGSYHVRSVPEMRQMSCVASCCG-WLILKSYYSI 2102
+PP + G + TF + D S H VPE+R +C+ G WL++ +
Sbjct: 10 LPPGFGTRPWLVQGSRGDTLTFVDVSDLSLHETVVPEVRGKTCLGGMHGDWLLMLHESTA 69
Query: 2101 QCYLF----NPVSLKKIILPPLID--NTFDVGILTYPPSDPNCVVMLVS----QKRRLCT 1952
C+L NP + KI LPPL N + P P C +++ S ++
Sbjct: 70 DCFLLRISTNPRT--KIQLPPLHQPLNFLSTIKMLESPDSPKCTILIASSPEVEEESYLL 127
Query: 1951 FCRIGDTKWIEQELVRKFKSKKRIGMPKKYISSVVS-CKGKVYLFFFGGVTVVNFYDSCA 1775
+CR G+ +W + LV F Y + S C V + G +
Sbjct: 128 YCRPGEDEWTK--LVSPFNDIHLSAFMCNYEGKICSACSNLVVIDMVDGKIQLQ---RVG 182
Query: 1774 SIKTSEMKWNKCSIPGAIRTTHFYVESCGEIFQ--VNQIHLMLSREIFLTFDIFKLDLST 1601
+IK E K+ + S + VESCG++F + ++ + + D+F LDL
Sbjct: 183 TIKDEE-KYARGS------GCYHVVESCGKLFLLWIEELGCFGNDGLLTAIDVFCLDLEL 235
Query: 1600 MDWVKVESLG-DRIFXXXXXXXXXXSGAELGVKGNCVY--YSIPNYAHLYRFDMDDGAIT 1430
M W +VES+G DR F E ++GNCVY +S + LY+F +DD I+
Sbjct: 236 MSWERVESIGSDRTFLISENYTFSCPSIEGVLQGNCVYLVWSSCDSERLYKFCLDDMTIS 295
Query: 1429 VTLPLPNVLNYWKGPFWMVPDCXXXXXXXXXXXXXXKSVV-----------IEERNN--- 1292
L W FW VP + ++E +
Sbjct: 296 FQQILSQPTKPWCRAFWTVPASIESILPMEISDKPNSLLSTKLSKDILLNDLDEHDGLGN 355
Query: 1291 ----WKELQTELLELIFSRLYLGDCIRFRLTCKAWISTTQLIRTHPCLTQPDSRCQEIPW 1124
W+ L +LLELI S L L D IRF C AW ++ P + + PW
Sbjct: 356 SLCLWEHLPVDLLELIVSNLSLVDRIRFPTVCMAWSK----------VSNPIEQAKVWPW 405
Query: 1123 LLSFQRNNKGICNFCHPIYNDAYVMNIPELAGAIVRH----AKHGWLLVSQG--DHSIFF 962
L+ + + G+C P+ + Y M + RH +K GW+ S G H IF
Sbjct: 406 LMHISKQD-GMCRLFDPLRGEVYNMQVSIFDTNEDRHIFRSSKDGWVFTSAGIYGHDIFI 464
Query: 961 FNPVTKDIIKLPDLPRSSYSFTNISFSTP-PTTSDCVVFGHKESHEVFVEMLIYSKEIDI 785
NP T+DI++ P R Y + +SFS+P P +C FG S + K ++I
Sbjct: 465 INPFTEDIVEPPMFERR-YHYNGVSFSSPNPMCPNCYFFGINSS--------LSGKFLNI 515
Query: 784 DTWSEF---YIDSKVPYE--FIASYCNPIFYDGVFYCLSKDGKLGILRPLEREDNELMWK 620
TW +I+ + Y+ F Y NP+ + G FYCL + G LG P W+
Sbjct: 516 HTWRHEETEWIEQRFEYDVPFPVGYNNPVMFCGKFYCLGRKGNLGAFDPTSNT-----WE 570
Query: 619 VLPVPAVISYSDMEIYETPISS----YIVECDGEILSVFMGIVGKPVSVFKLDVSKMKWV 452
+L P I + +M++ + Y+V+ +GE++SV + + VFKLD++KM WV
Sbjct: 571 ILDKPEPI-HVEMDLLQNDHRGREFCYLVDLEGELISVLLHNASEAPRVFKLDLTKMSWV 629
Query: 451 TLATLGDKVIFLSHATSLLVPAGLKGTEDRIYLPKFR-GNDIVFYSLRTGNYHSFGDNSD 275
+ +G +FL H TS V + G +RIY P++ VFY + Y+
Sbjct: 630 EVEDIGGGALFLDHRTSHGVGSPDGGHGNRIYFPRYSVDRKPVFYDMDNKMYY------- 682
Query: 274 KDSRADWINTREHWNCTWIQSNM 206
+ E NC W+ N+
Sbjct: 683 ----PSFYGHIEPLNCVWVVPNL 701
>dbj|BAD08724.1| F-box protein family-like [Oryza sativa Japonica Group]
gi|42408294|dbj|BAD09449.1| F-box protein family-like
[Oryza sativa Japonica Group] gi|125561733|gb|EAZ07181.1|
hypothetical protein OsI_29426 [Oryza sativa Indica
Group] gi|125603601|gb|EAZ42926.1| hypothetical protein
OsJ_27515 [Oryza sativa Japonica Group]
Length = 712
Score = 216 bits (550), Expect = 2e-53
Identities = 191/751 (25%), Positives = 308/751 (41%), Gaps = 60/751 (7%)
Frame = -2
Query: 2278 VPPTYAPSLVFCHGKKFRNQTFCTICDGSYHVRSVPEMRQMSCVASCCG-WLILKSYYSI 2102
+PP + G + TF + D S H VPE+R +C+ G WL++ +
Sbjct: 10 LPPGFGTRPWLVQGSRGDTLTFVDVSDLSLHETVVPEVRGKTCLGCMHGDWLLMLDESTA 69
Query: 2101 QCYLF----NP---VSLKKIILPPLIDNTFDVGILTYPPSDPNCVVMLVS----QKRRLC 1955
C+L NP + L + PPL +T++ + P NC +++ S ++
Sbjct: 70 DCFLLRITTNPRTKIQLPPLHQPPLFLSTYE---MLESPESANCTILVASSTEAEEECYL 126
Query: 1954 TFCRIGDTKWIEQELVRKFKSKKRIGMPKKYISSVVSCKGKVYLFFFGGVTVVNFYDS-- 1781
C GD W + V + + + Y GK+Y F + ++ D
Sbjct: 127 LHCHPGDEMWTKS--VSPYDDISFSSLMRNY-------GGKIY-DFASNLIAIDVIDGKI 176
Query: 1780 ----CASIKTSEMKWNKCSIPGAIRTTHFYVESCGEIFQ--VNQIHLMLSREIFLTFDIF 1619
+IK E +C + +ESCG++F ++ + + +F
Sbjct: 177 ELQQLGTIKDEEEDSRRCG-------RYHIIESCGKLFLLWIDDLGCFYDDGLLTAIRVF 229
Query: 1618 KLDLSTMDWVKVESLG-DRIFXXXXXXXXXXSGAELGVKGNCVY--YSIPNYAHLYRFDM 1448
L+L T+ W +VE +G DR F E ++GNCVY +S + LY+F +
Sbjct: 230 CLNLETLSWERVEGIGNDRAFLISGTYAFSCPSIEGVLQGNCVYLVWSSCDSERLYKFCL 289
Query: 1447 DDGAITVTLPLPNVLNYWKGPFWMVPDCXXXXXXXXXXXXXXKSVVIEERNN-------- 1292
DD I+ LP W FW +P + + +
Sbjct: 290 DDMTISFHQILPQPTKSWSRAFWAIPASTQSISMPQESTIPNNLLWRKPSKDNPPNDFDE 349
Query: 1291 ------------WKELQTELLELIFSRLYLGDCIRFRLTCKAWISTTQLIRTHPCLTQPD 1148
W L ELLELI S L L D IRF CKAW + P
Sbjct: 350 HKEDGQENSLRPWDHLPVELLELIVSNLSLVDRIRFPTVCKAWSE----------VLNPI 399
Query: 1147 SRCQEIPWLLSFQRNNKGICNFCHPIYNDAYVMNIPELAGAIVRH----AKHGWLLVSQG 980
+ + PWL+ + + G C P+ ++ Y + + RH +K GW+L S G
Sbjct: 400 EQAKVWPWLMHISKQD-GTCKLFDPLRSENYNIQVTIFDTNEDRHIFRSSKDGWVLASAG 458
Query: 979 --DHSIFFFNPVTKDIIKLPDLPRSSYSFTNISFSTP-PTTSDCVVFGHKESHEVFVEML 809
+ IF NP T++I++ P L Y++ +SFS+ P DC FG S
Sbjct: 459 IYGNDIFIINPFTEEIVEPPMLA-FLYNYNGVSFSSSNPMCLDCAFFGINSSDS------ 511
Query: 808 IYSKEIDIDTWSE---FYIDSKVPYE--FIASYCNPIFYDGVFYCLSKDGKLGILRPLER 644
K + TW +I+ + Y F Y NP+ +DG FYCL + G LG+ P
Sbjct: 512 --GKFLSTFTWQHGEPHWIEQEFEYNVSFPVGYNNPVMFDGKFYCLGRKGNLGVFDPTSN 569
Query: 643 EDNELMWKVLPVPAVISYSDMEIYETPISS----YIVECDGEILSVFMGIVGKPVSVFKL 476
W++L P I + +M+++E Y+V+ DGE++SVF+ + VFKL
Sbjct: 570 T-----WRILDKPEPI-HVEMDLFEEDHIGREFCYLVDMDGELISVFLRNANELPRVFKL 623
Query: 475 DVSKMKWVTLATLGDKVIFLSHATSLLVPAGLKGTEDRIYLPKF-RGNDIVFYSLRTGNY 299
+ +++ WV + +G +FL + +S V + G +RIY P++ + VFY
Sbjct: 624 NRTEISWVEVEDIGGGALFLDYRSSYGVASPDGGNGNRIYFPRYSKDGKPVFY------- 676
Query: 298 HSFGDNSDKDSRADWINTREHWNCTWIQSNM 206
D + K + E NC W+ N+
Sbjct: 677 ----DMNKKTYSPSFYGVIEPLNCVWVVPNL 703
>gb|EEC83661.1| hypothetical protein OsI_29429 [Oryza sativa Indica Group]
Length = 476
Score = 154 bits (388), Expect = 1e-34
Identities = 105/332 (31%), Positives = 159/332 (47%), Gaps = 16/332 (4%)
Frame = -2
Query: 1291 WKELQTELLELIFSRLYLGDCIRFRLTCKAWISTTQLIRTHPCLTQPDSRCQEIPWLLSF 1112
W+ L +LLELI S L L D IRF C AW ++ P + + PWL+
Sbjct: 152 WEHLPVDLLELIVSNLSLVDRIRFPTVCMAWSK----------VSNPIEQAKVWPWLMHI 201
Query: 1111 QRNNKGICNFCHPIYNDAYVMNIPELAGAIVRH----AKHGWLLVSQG--DHSIFFFNPV 950
+ + G+C P+ + Y M + RH +K GW+ S G H IF NP
Sbjct: 202 SKQD-GMCRLFDPLRGEVYNMQVSIFDTNEDRHIFRSSKDGWVFTSAGIYGHDIFIINPF 260
Query: 949 TKDIIKLPDLPRSSYSFTNISFSTP-PTTSDCVVFGHKESHEVFVEMLIYSKEIDIDTWS 773
T+DI++ P R Y + +SFS+P P +C FG S + K ++I TW
Sbjct: 261 TEDIVEPPMFERR-YHYNGVSFSSPNPMCPNCYFFGINSS--------LSGKFLNIHTWR 311
Query: 772 EF---YIDSKVPYE--FIASYCNPIFYDGVFYCLSKDGKLGILRPLEREDNELMWKVLPV 608
+I+ + Y+ F Y NP+ + G FYCL + G LG P W++L
Sbjct: 312 HEETEWIEQRFEYDVPFPVGYNNPVMFCGKFYCLGRKGNLGAFDPTSNT-----WEILDK 366
Query: 607 PAVISYSDMEIYETPISS----YIVECDGEILSVFMGIVGKPVSVFKLDVSKMKWVTLAT 440
P I + +M++ E Y+V+ +GE++SV + + VFKLD++KM WV +
Sbjct: 367 PEPI-HVEMDLLENDHRGREFCYLVDLEGELISVLLHNASEAPRVFKLDLTKMSWVEVED 425
Query: 439 LGDKVIFLSHATSLLVPAGLKGTEDRIYLPKF 344
+G +FL H TS V + G +RIY P++
Sbjct: 426 IGGGALFLDHRTSHGVGSPDGGHGNRIYFPRY 457