BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013086
         (1746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-20
ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-20
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...   105   5e-20
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...   102   3e-19
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    99   5e-18

>ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|222845402|gb|EEE82949.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score =  106 bits (264), Expect = 2e-20
 Identities = 94/315 (29%), Positives = 152/315 (48%), Gaps = 11/315 (3%)
 Frame = -2

Query: 1592 KKVTTRMKKNNLDMKLGEIDVVSKLPLDVVFDIFARLPLKTISQCRWVCKRWYDVVLHPR 1413
            K+  TR+ +      L E      LP ++  DI +RLP++ ++QC+ VCK W D++  P 
Sbjct: 3    KRYRTRLYERKC---LEEPSSTPTLPAEIFVDILSRLPVEAMTQCKSVCKSWRDLLSTPY 59

Query: 1412 FAQVHFA----SNRLQCFAFRDRYRKFYMIDNECFDHFETQVRAYNLEFNEFKENFKAPR 1245
            FA++HFA    S+ L C    ++ + +      C     ++    N         FK P+
Sbjct: 60   FARLHFAKAKPSSLLFCHCSGNKTKLY------CCHIHSSRGSNINNAMVSMPTKFKLPK 113

Query: 1244 FVKQYEVVGSVNGLICFAPARENIYQTSKSRYYICNPITGDYLML--PKSPKN-HI-RPI 1077
               + +VVGS NGL+C +          K ++YICNPITG+Y+ +  PK  +  H+  PI
Sbjct: 114  NTFRGKVVGSSNGLLCLSEIHR-----MKKKFYICNPITGEYIGIAGPKVDQGWHVFEPI 168

Query: 1076 ASGFGFDSLNNVYKVL--RILSDXXXXXXXXXVYTFGSDCWRVVALNVPYISDMNLSN-V 906
              GF ++  N   K+L  R+            ++T GS+ WR    N+     ++L   V
Sbjct: 169  --GFFYNPQNQQCKILMPRVRVGYGNFPGSGQIFTLGSNSWR----NIDIPGHLHLIRAV 222

Query: 905  HVNNCLYWVACTSIEIAIIVSFNMATEEFSTIQLPNIGKMSRTGTLIVLRKQLCLIIDGL 726
             +N  L+W+  ++ +   I SF+M  E+  +I LP+   M  T +L  L   LC I D  
Sbjct: 223  PLNGSLHWI--STRDDRHISSFDMENEQALSIALPDQVVM-HTASLAGLGNFLC-IFDNE 278

Query: 725  FDIETEMWEMKFYRI 681
            +  E  +W MK Y +
Sbjct: 279  YP-EFNIWVMKEYGV 292


>ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1|
            predicted protein [Populus trichocarpa]
          Length = 477

 Score =  106 bits (264), Expect = 2e-20
 Identities = 85/307 (27%), Positives = 132/307 (42%), Gaps = 13/307 (4%)
 Frame = -2

Query: 1529 VSKLPLDVVFDIFARLPLKTISQCRWVCKRWYDVVLHPRFAQVHFASN------RLQCFA 1368
            +S LP+  + DI +RLP KTI  C  VCK+W D++L P FA++H          R     
Sbjct: 32   ISALPIQNLVDILSRLPFKTIFSCMCVCKKWKDLILAPDFAKLHHTRAPASLILRSHRHG 91

Query: 1367 FRDRYRKFYMIDNECFDHFETQVRAYNLEFNEFKENFKAPRFVKQYEVVGSVNGLICFAP 1188
             R R R   ++D E  D              +   +F  P     +E+V + NGLIC   
Sbjct: 92   RRRRPRSLCLLDLEASDICSPDAAV------KLSPDFGFP--TGNFEIVNTCNGLICIR- 142

Query: 1187 ARENIYQTSKSRYYICNPITGDYLMLPKSPKNHIRPIASGFGFDSLNNVYKVLRILSDXX 1008
                 +  S +   I NP+ GDY+ LP + K H   + S FG     + YKV++ +    
Sbjct: 143  -----HFHSPNDISILNPLVGDYITLPLTKKKHKSYVFSWFGHSPKTDEYKVIQFVQQ-- 195

Query: 1007 XXXXXXXVYTFGSDCWRVV---ALNVPYISDMNLSNVHVNNCLYWVACTSIEIAIIVSFN 837
                   ++T G   W  +   AL+ P   DM   N  V  CL+W+     +   I    
Sbjct: 196  PSKLEAEIHTLGKGTWTSIHGGALSPPI--DMRCHNAFVGGCLHWIVNDPSKSEFIYCLE 253

Query: 836  MATEEFSTIQL-PNIG--KMSRTGTLIVLRKQLCL-IIDGLFDIETEMWEMKFYRILGSL 669
               E F  +   P++G     RTG +++     CL   D       ++W MK Y +  S 
Sbjct: 254  FGRELFQPVAAPPHLGPNDKDRTGDMMLGVLGGCLYFFDYPLGDSFDIWVMKQYGVQESW 313

Query: 668  AEEYVIQ 648
             +E++++
Sbjct: 314  TKEFILK 320


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
            gi|222861279|gb|EEE98821.1| f-box family protein [Populus
            trichocarpa]
          Length = 422

 Score =  105 bits (261), Expect = 5e-20
 Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 25/317 (7%)
 Frame = -2

Query: 1520 LPLDVVFDIFARLPLKTISQCRWVCKRWYDVVLHPRFAQVHFASNR---------LQC-F 1371
            LP ++  DI +RLP+ ++ Q + VC+ W  +V  P+   ++ + +          L C F
Sbjct: 28   LPREIAHDILSRLPITSLVQFKCVCRAWRALVQDPQLVDLYLSCSTQDTDHPCLILHCDF 87

Query: 1370 AFRDRYRKFYMIDNECFDHFETQVRAYNLEFNEFKENFKAPRFVKQYEVVGSVNGLICFA 1191
              R+     Y +D    +  + +V+     F+           + ++EVVGS NGL+C +
Sbjct: 88   PIRNN---LYFVDFAAHEEEKEKVKRIPAPFSSM---------MPEFEVVGSCNGLLCLS 135

Query: 1190 PARENIYQTSKSRYYICNPITGDYLMLPKSPKNHIRPIASGFGFDSLNNVYKVLRIL--- 1020
               +++Y  S    YI NP TG Y  LPKS +   + + SGFGF+     YKV+RI+   
Sbjct: 136  ---DSLYNDS---LYIYNPFTGCYKELPKSLQYPDQEVVSGFGFNPKTKEYKVIRIVYYR 189

Query: 1019 ---------SDXXXXXXXXXVYTFGSDCWRVVALNVPYISDMNLSNVHVNNCLYWVA--C 873
                                + T G   WR +   V Y      S   VN  L+W++  C
Sbjct: 190  NGHGGYPRSRRIIYPLSEVQILTLGCPEWRSLG-KVSYRLVRRASGALVNGRLHWISRPC 248

Query: 872  TSIEIAIIVSFNMATEEFSTIQLPNIGKMSRTG-TLIVLRKQLCLIIDGLFDIETEMWEM 696
             +     +VSF++  E+F  +  P+ G ++R    L+VLR  L   +   +    E+W M
Sbjct: 249  RNKPARRLVSFDLTDEQFREVSKPDCGGLNRCNYHLVVLRGCLSAAVYCNYG-RLEIWVM 307

Query: 695  KFYRILGSLAEEYVIQA 645
            K Y +  S  +EY I A
Sbjct: 308  KEYNVKESWVKEYNIGA 324


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
            gi|222843314|gb|EEE80861.1| f-box family protein [Populus
            trichocarpa]
          Length = 408

 Score =  102 bits (254), Expect = 3e-19
 Identities = 88/309 (28%), Positives = 140/309 (45%), Gaps = 17/309 (5%)
 Frame = -2

Query: 1520 LPLDVVFDIFARLPLKTISQCRWVCKRWYDVVLHPRFAQVHFASNRLQCFAFRDRYRKFY 1341
            LP ++  DI +RLP+ ++ + + VC+ W  + L P    ++ + +  +       +  F 
Sbjct: 28   LPREIAQDILSRLPITSLVKFKCVCRAWRAMALDPEVVNLYLSCSTQETDPCVILHCDFP 87

Query: 1340 MIDNECFDHFETQVRAYNLEFNEFKENFKAP--RFVKQYEVVGSVNGLICFAPARENIYQ 1167
            + +N  F  F     A + E  E  +  +AP    + ++EVVGS NGL+C + +  N   
Sbjct: 88   IRNNLYFVDF-----AAHEEEKEKVKRIRAPFSSMMPEFEVVGSCNGLLCLSDSLFN--- 139

Query: 1166 TSKSRYYICNPITGDYLMLPKSPKNHIRPIASGFGFDSLNNVYKVLRIL----------- 1020
                  YI NP TG Y  LPKS +   + +  GFGF+   N YKV+RI+           
Sbjct: 140  ---DSLYIYNPFTGRYKELPKSLQYPDQEVVFGFGFNPKTNEYKVIRIVYYRNGHGRYPR 196

Query: 1019 -SDXXXXXXXXXVYTFGSDCWRVVALNVPYISDMNLSNVHVNNCLYWVA--CTSIEIAII 849
                        + T G   WR +   V Y      S   VN  L+WV+  C +     +
Sbjct: 197  SRRIIYPLSQVQILTLGCPGWRSLG-KVSYRLVRRASETLVNGRLHWVSRPCRNKPARRL 255

Query: 848  VSFNMATEEFSTIQLPNIGKMSRTG-TLIVLRKQLCLIIDGLFDIETEMWEMKFYRILGS 672
            VSF++  E+F  +  P+ G ++R    L VLR  L + +   +    E+W MK Y +  S
Sbjct: 256  VSFDLTDEQFREVPKPDCGGLNRCDYHLAVLRGCLSVAVYCNYG-RLEIWVMKEYNVKES 314

Query: 671  LAEEYVIQA 645
              +EY I A
Sbjct: 315  WVKEYNIGA 323


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
            gi|147785390|emb|CAN68678.1| hypothetical protein
            VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 98.6 bits (244), Expect = 5e-18
 Identities = 88/314 (28%), Positives = 135/314 (42%), Gaps = 19/314 (6%)
 Frame = -2

Query: 1529 VSKLPLDVVFDIFARLPLKTISQCRWVCKRWYDVVLHPRFAQVHFASNRLQ--CFAFRDR 1356
            + +LP D++ DI +RLP+ ++ Q R+VC+ W  +      A  H         C      
Sbjct: 27   MERLPRDIILDILSRLPVTSLVQFRFVCRGWRLMAQDSLLASKHLCRTAQYNPCLILHCD 86

Query: 1355 Y---RKFYMIDNECFDHFETQVRAYNLEFNEFKENFKAPRFVKQYEVVGSVNGLICFAPA 1185
            Y    +   +D       +  VR   + F            + ++EVVGS NGL+C A +
Sbjct: 87   YPIRNQISFVDISAESRDKDMVRKLTIPFWAS---------MPEFEVVGSCNGLLCLADS 137

Query: 1184 RENIYQTSKSRYYICNPITGDYLMLPKSPKNHIRPIASGFGFDSLNNVYKVLRIL----- 1020
                    K   Y+ NP T D+  LPKS +   + +  GFG+  +  VYKV++++     
Sbjct: 138  ------LFKDAVYVHNPFTRDFKQLPKSLQYPDQEVVFGFGYHPMTEVYKVVKVVYYRNG 191

Query: 1019 -------SDXXXXXXXXXVYTFGSDCWRVVALNVPYISDMNLSNVHVNNCLYWVACTSIE 861
                              V T GS  WR +   V Y  D   S   VN  L+WV      
Sbjct: 192  YGGFSRFRRITCSQSEVQVLTLGSPTWRSLG-KVSYQLDRWPSEALVNGRLHWVTRPRRY 250

Query: 860  IA-IIVSFNMATEEFSTIQLPNIGKMSRTG-TLIVLRKQLCLIIDGLFDIETEMWEMKFY 687
            +   IVSF++A E+F  I  P+ G +SR    L+VL   L   +    + + E+W MK Y
Sbjct: 251  VTRFIVSFDLADEQFREIPKPDCGGLSRCNYHLLVLGGCLSAAVH-RSNGKLEVWVMKEY 309

Query: 686  RILGSLAEEYVIQA 645
             +  S  +E+ I A
Sbjct: 310  DVKESWIKEFNIGA 323