BLASTX nr result
ID: Coptis24_contig00013080
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013080 (893 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumi... 163 6e-38 sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat ... 158 1e-36 ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif... 153 5e-35 ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin... 152 1e-34 ref|XP_002863254.1| hypothetical protein ARALYDRAFT_332995 [Arab... 150 5e-34 >ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumis sativus] gi|449490588|ref|XP_004158648.1| PREDICTED: F-box protein SKIP19-like [Cucumis sativus] Length = 311 Score = 163 bits (412), Expect = 6e-38 Identities = 90/221 (40%), Positives = 135/221 (61%) Frame = +1 Query: 229 TLKKEVRNWIDLPLDVLIRIFMKLGVIEILVNAQKVCSLWREVSKEPQIFRSIIFREPKK 408 +++ E RNW++LP+DV I KLG +EIL AQ VCS WR++ ++P ++R I R P Sbjct: 9 SVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRVIDMRYPCD 68 Query: 409 YFTHRNHFENFAKEAVDRSCGQLVKLSGNSWITEGLVNYIVDQSNPLKSLRLGFQALLTD 588 ++ + E ++AV RSCGQL+ + + T+ L+ YI N L LRL + ++D Sbjct: 69 WWDMDYNLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRLVYCNRISD 128 Query: 589 NAYIALFKRLDLLEDLVLSQVYFERKVIEELGRSCQNLKYFRLNLVRILWKWKANWDEEA 768 + +L LLEDL LS F+ + +E LG++C LK +LN R ++ + D+ A Sbjct: 129 EGLVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLN--RQFYR-RVECDKGA 185 Query: 769 FAIAENLPQLRRLCLVESTLSNRGLQAILDGCPQIEYLDLR 891 AIAEN+P LR L + + L+N+GL+AILDGC +E LDLR Sbjct: 186 LAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLR 226 >sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat protein 23 gi|5732066|gb|AAD48965.1|AF147263_7 contains similarity to Medicago truncatula N7 protein (GB:Y17613) [Arabidopsis thaliana] gi|7267310|emb|CAB81092.1| AT4g05500 [Arabidopsis thaliana] Length = 449 Score = 158 bits (400), Expect = 1e-36 Identities = 88/218 (40%), Positives = 129/218 (59%) Frame = +1 Query: 238 KEVRNWIDLPLDVLIRIFMKLGVIEILVNAQKVCSLWREVSKEPQIFRSIIFREPKKYFT 417 K++RNW +LP + I ++LG IEIL NAQKVC W V K+P ++R I Sbjct: 176 KKLRNWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDRAA 235 Query: 418 HRNHFENFAKEAVDRSCGQLVKLSGNSWITEGLVNYIVDQSNPLKSLRLGFQALLTDNAY 597 + E+ + AVDRS G L+++ + T L+ YI D+S+ LKSL L +TD Sbjct: 236 FKYDLESMCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFPITDEGV 295 Query: 598 IALFKRLDLLEDLVLSQVYFERKVIEELGRSCQNLKYFRLNLVRILWKWKANWDEEAFAI 777 ++ LLE L +S F + + ++GRSC NLK +LN + + +D+ A AI Sbjct: 296 AKAVSKVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKLNRAPEIMFSNSGFDDNAKAI 355 Query: 778 AENLPQLRRLCLVESTLSNRGLQAILDGCPQIEYLDLR 891 AE++P+LR L L+ + L+N+GL AILDGCP +E+LDLR Sbjct: 356 AESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLR 393 >ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera] gi|147853333|emb|CAN82327.1| hypothetical protein VITISV_041807 [Vitis vinifera] gi|297740788|emb|CBI30970.3| unnamed protein product [Vitis vinifera] Length = 321 Score = 153 bits (387), Expect = 5e-35 Identities = 90/219 (41%), Positives = 129/219 (58%) Frame = +1 Query: 235 KKEVRNWIDLPLDVLIRIFMKLGVIEILVNAQKVCSLWREVSKEPQIFRSIIFREPKKYF 414 ++E RNW +LP DV I KL +EIL +AQ VCS WR++ +EP ++R+I Sbjct: 14 EEEERNWQELPRDVTSMILSKLNAVEILSSAQFVCSFWRKLCREPMMWRNIDMHNLGDLC 73 Query: 415 THRNHFENFAKEAVDRSCGQLVKLSGNSWITEGLVNYIVDQSNPLKSLRLGFQALLTDNA 594 E A+ AVDRS GQL+ + + + T+ L+NYI+D+S+ ++ LRL ++D+ Sbjct: 74 DLGYDLEEMARHAVDRSGGQLLSICIDDFATDNLLNYIIDRSSHIRHLRLVSCYGISDDG 133 Query: 595 YIALFKRLDLLEDLVLSQVYFERKVIEELGRSCQNLKYFRLNLVRILWKWKANWDEEAFA 774 KRL LL ++ L F ++V+E +G+ C LK FRLN DEEA A Sbjct: 134 LSEGIKRLPLLVEIDLCYCSFSKEVLEAIGQCCPRLKSFRLNCQGFRHP-HIECDEEALA 192 Query: 775 IAENLPQLRRLCLVESTLSNRGLQAILDGCPQIEYLDLR 891 IA+N+P L+ L L + L+N GL AILDGC +E LDLR Sbjct: 193 IAQNMPGLKSLQLFGNKLTNNGLLAILDGCCHLESLDLR 231 >ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max] Length = 318 Score = 152 bits (384), Expect = 1e-34 Identities = 92/220 (41%), Positives = 130/220 (59%), Gaps = 2/220 (0%) Frame = +1 Query: 238 KEVRNWIDLPLDVLIRIFMKLGVIEILVNAQKVCSLWREVSKEPQIFRSIIFREPKKYFT 417 +E RNW+DLP DV+ IF KLG IEIL AQ+VCS+WR +SKEP ++R+I R T Sbjct: 15 EEERNWLDLPRDVVCTIFQKLGAIEILTRAQRVCSVWRGISKEPLLWRTIDMRNSGDIET 74 Query: 418 HRNHFENFAKEAVDRSCGQLVKLSGNSWITEGLVNYIVDQSNPLKSLRLGFQALLTDNAY 597 + F A+D S G L+ ++ + T+ L+ +I ++ L+SLRL ++D Sbjct: 75 N-FVFLAMCHRAIDYSSGHLLHINIEYFATDDLLRHITHSTSNLRSLRLACCYQISDEGL 133 Query: 598 IALFKRLDLLEDLVLSQVYFE--RKVIEELGRSCQNLKYFRLNLVRILWKWKANWDEEAF 771 + K L LE+L +S F R +E +GR C++LK + N+ + + DEEAF Sbjct: 134 CEIAKELPQLEELDISISSFNPTRDPLEAVGRCCRHLKTLKFNM-KGYRRPHIECDEEAF 192 Query: 772 AIAENLPQLRRLCLVESTLSNRGLQAILDGCPQIEYLDLR 891 AIAE +P L L L + L+N GL AILDGCP +E LDLR Sbjct: 193 AIAETMPTLHHLQLFGNKLTNEGLLAILDGCPHLESLDLR 232 >ref|XP_002863254.1| hypothetical protein ARALYDRAFT_332995 [Arabidopsis lyrata subsp. lyrata] gi|297309088|gb|EFH39513.1| hypothetical protein ARALYDRAFT_332995 [Arabidopsis lyrata subsp. lyrata] Length = 296 Score = 150 bits (378), Expect = 5e-34 Identities = 88/218 (40%), Positives = 128/218 (58%) Frame = +1 Query: 238 KEVRNWIDLPLDVLIRIFMKLGVIEILVNAQKVCSLWREVSKEPQIFRSIIFREPKKYFT 417 +E RNW +LP ++ I +LG I+IL NAQKVC+ WR VS +P ++R I + Sbjct: 13 EEPRNWAELPSELTFSILNRLGAIDILENAQKVCTSWRRVSLDPLMWRKIDMHYLGDMGS 72 Query: 418 HRNHFENFAKEAVDRSCGQLVKLSGNSWITEGLVNYIVDQSNPLKSLRLGFQALLTDNAY 597 FE+ + AVDRS G LV++ + T+ L+NYI D+S+ L+SLRL +TD Sbjct: 73 MIYDFESMCRHAVDRSQGGLVEIDIWHFGTDDLLNYIADRSSNLRSLRLAMCNQITDEGV 132 Query: 598 IALFKRLDLLEDLVLSQVYFERKVIEELGRSCQNLKYFRLNLVRILWKWKANWDEEAFAI 777 +L LLEDL +S F + + +G+SC NLK +LN + + + A I Sbjct: 133 TEAVVKLPLLEDLDVSFCAFLGESLRVVGQSCPNLKTLKLNRSPGIDCFLFRPNINAIVI 192 Query: 778 AENLPQLRRLCLVESTLSNRGLQAILDGCPQIEYLDLR 891 AE++P LR + L + ++N GL AILDGCP +E+LDLR Sbjct: 193 AESMPNLRHIQLFGNEINNTGLNAILDGCPHVEHLDLR 230