BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013080
         (893 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumi...   163   6e-38
sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat ...   158   1e-36
ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...   153   5e-35
ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...   152   1e-34
ref|XP_002863254.1| hypothetical protein ARALYDRAFT_332995 [Arab...   150   5e-34

>ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumis sativus]
           gi|449490588|ref|XP_004158648.1| PREDICTED: F-box
           protein SKIP19-like [Cucumis sativus]
          Length = 311

 Score =  163 bits (412), Expect = 6e-38
 Identities = 90/221 (40%), Positives = 135/221 (61%)
 Frame = +1

Query: 229 TLKKEVRNWIDLPLDVLIRIFMKLGVIEILVNAQKVCSLWREVSKEPQIFRSIIFREPKK 408
           +++ E RNW++LP+DV   I  KLG +EIL  AQ VCS WR++ ++P ++R I  R P  
Sbjct: 9   SVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRVIDMRYPCD 68

Query: 409 YFTHRNHFENFAKEAVDRSCGQLVKLSGNSWITEGLVNYIVDQSNPLKSLRLGFQALLTD 588
           ++    + E   ++AV RSCGQL+  +   + T+ L+ YI    N L  LRL +   ++D
Sbjct: 69  WWDMDYNLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRLVYCNRISD 128

Query: 589 NAYIALFKRLDLLEDLVLSQVYFERKVIEELGRSCQNLKYFRLNLVRILWKWKANWDEEA 768
              +    +L LLEDL LS   F+ + +E LG++C  LK  +LN  R  ++ +   D+ A
Sbjct: 129 EGLVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLN--RQFYR-RVECDKGA 185

Query: 769 FAIAENLPQLRRLCLVESTLSNRGLQAILDGCPQIEYLDLR 891
            AIAEN+P LR L +  + L+N+GL+AILDGC  +E LDLR
Sbjct: 186 LAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLR 226


>sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat protein 23
           gi|5732066|gb|AAD48965.1|AF147263_7 contains similarity
           to Medicago truncatula N7 protein (GB:Y17613)
           [Arabidopsis thaliana] gi|7267310|emb|CAB81092.1|
           AT4g05500 [Arabidopsis thaliana]
          Length = 449

 Score =  158 bits (400), Expect = 1e-36
 Identities = 88/218 (40%), Positives = 129/218 (59%)
 Frame = +1

Query: 238 KEVRNWIDLPLDVLIRIFMKLGVIEILVNAQKVCSLWREVSKEPQIFRSIIFREPKKYFT 417
           K++RNW +LP  +   I ++LG IEIL NAQKVC  W  V K+P ++R I          
Sbjct: 176 KKLRNWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDRAA 235

Query: 418 HRNHFENFAKEAVDRSCGQLVKLSGNSWITEGLVNYIVDQSNPLKSLRLGFQALLTDNAY 597
            +   E+  + AVDRS G L+++    + T  L+ YI D+S+ LKSL L     +TD   
Sbjct: 236 FKYDLESMCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFPITDEGV 295

Query: 598 IALFKRLDLLEDLVLSQVYFERKVIEELGRSCQNLKYFRLNLVRILWKWKANWDEEAFAI 777
                ++ LLE L +S   F  + + ++GRSC NLK  +LN    +    + +D+ A AI
Sbjct: 296 AKAVSKVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKLNRAPEIMFSNSGFDDNAKAI 355

Query: 778 AENLPQLRRLCLVESTLSNRGLQAILDGCPQIEYLDLR 891
           AE++P+LR L L+ + L+N+GL AILDGCP +E+LDLR
Sbjct: 356 AESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLR 393


>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score =  153 bits (387), Expect = 5e-35
 Identities = 90/219 (41%), Positives = 129/219 (58%)
 Frame = +1

Query: 235 KKEVRNWIDLPLDVLIRIFMKLGVIEILVNAQKVCSLWREVSKEPQIFRSIIFREPKKYF 414
           ++E RNW +LP DV   I  KL  +EIL +AQ VCS WR++ +EP ++R+I         
Sbjct: 14  EEEERNWQELPRDVTSMILSKLNAVEILSSAQFVCSFWRKLCREPMMWRNIDMHNLGDLC 73

Query: 415 THRNHFENFAKEAVDRSCGQLVKLSGNSWITEGLVNYIVDQSNPLKSLRLGFQALLTDNA 594
                 E  A+ AVDRS GQL+ +  + + T+ L+NYI+D+S+ ++ LRL     ++D+ 
Sbjct: 74  DLGYDLEEMARHAVDRSGGQLLSICIDDFATDNLLNYIIDRSSHIRHLRLVSCYGISDDG 133

Query: 595 YIALFKRLDLLEDLVLSQVYFERKVIEELGRSCQNLKYFRLNLVRILWKWKANWDEEAFA 774
                KRL LL ++ L    F ++V+E +G+ C  LK FRLN            DEEA A
Sbjct: 134 LSEGIKRLPLLVEIDLCYCSFSKEVLEAIGQCCPRLKSFRLNCQGFRHP-HIECDEEALA 192

Query: 775 IAENLPQLRRLCLVESTLSNRGLQAILDGCPQIEYLDLR 891
           IA+N+P L+ L L  + L+N GL AILDGC  +E LDLR
Sbjct: 193 IAQNMPGLKSLQLFGNKLTNNGLLAILDGCCHLESLDLR 231


>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score =  152 bits (384), Expect = 1e-34
 Identities = 92/220 (41%), Positives = 130/220 (59%), Gaps = 2/220 (0%)
 Frame = +1

Query: 238 KEVRNWIDLPLDVLIRIFMKLGVIEILVNAQKVCSLWREVSKEPQIFRSIIFREPKKYFT 417
           +E RNW+DLP DV+  IF KLG IEIL  AQ+VCS+WR +SKEP ++R+I  R      T
Sbjct: 15  EEERNWLDLPRDVVCTIFQKLGAIEILTRAQRVCSVWRGISKEPLLWRTIDMRNSGDIET 74

Query: 418 HRNHFENFAKEAVDRSCGQLVKLSGNSWITEGLVNYIVDQSNPLKSLRLGFQALLTDNAY 597
           +   F      A+D S G L+ ++   + T+ L+ +I   ++ L+SLRL     ++D   
Sbjct: 75  N-FVFLAMCHRAIDYSSGHLLHINIEYFATDDLLRHITHSTSNLRSLRLACCYQISDEGL 133

Query: 598 IALFKRLDLLEDLVLSQVYFE--RKVIEELGRSCQNLKYFRLNLVRILWKWKANWDEEAF 771
             + K L  LE+L +S   F   R  +E +GR C++LK  + N+ +   +     DEEAF
Sbjct: 134 CEIAKELPQLEELDISISSFNPTRDPLEAVGRCCRHLKTLKFNM-KGYRRPHIECDEEAF 192

Query: 772 AIAENLPQLRRLCLVESTLSNRGLQAILDGCPQIEYLDLR 891
           AIAE +P L  L L  + L+N GL AILDGCP +E LDLR
Sbjct: 193 AIAETMPTLHHLQLFGNKLTNEGLLAILDGCPHLESLDLR 232


>ref|XP_002863254.1| hypothetical protein ARALYDRAFT_332995 [Arabidopsis lyrata subsp.
           lyrata] gi|297309088|gb|EFH39513.1| hypothetical protein
           ARALYDRAFT_332995 [Arabidopsis lyrata subsp. lyrata]
          Length = 296

 Score =  150 bits (378), Expect = 5e-34
 Identities = 88/218 (40%), Positives = 128/218 (58%)
 Frame = +1

Query: 238 KEVRNWIDLPLDVLIRIFMKLGVIEILVNAQKVCSLWREVSKEPQIFRSIIFREPKKYFT 417
           +E RNW +LP ++   I  +LG I+IL NAQKVC+ WR VS +P ++R I         +
Sbjct: 13  EEPRNWAELPSELTFSILNRLGAIDILENAQKVCTSWRRVSLDPLMWRKIDMHYLGDMGS 72

Query: 418 HRNHFENFAKEAVDRSCGQLVKLSGNSWITEGLVNYIVDQSNPLKSLRLGFQALLTDNAY 597
               FE+  + AVDRS G LV++    + T+ L+NYI D+S+ L+SLRL     +TD   
Sbjct: 73  MIYDFESMCRHAVDRSQGGLVEIDIWHFGTDDLLNYIADRSSNLRSLRLAMCNQITDEGV 132

Query: 598 IALFKRLDLLEDLVLSQVYFERKVIEELGRSCQNLKYFRLNLVRILWKWKANWDEEAFAI 777
                +L LLEDL +S   F  + +  +G+SC NLK  +LN    +  +    +  A  I
Sbjct: 133 TEAVVKLPLLEDLDVSFCAFLGESLRVVGQSCPNLKTLKLNRSPGIDCFLFRPNINAIVI 192

Query: 778 AENLPQLRRLCLVESTLSNRGLQAILDGCPQIEYLDLR 891
           AE++P LR + L  + ++N GL AILDGCP +E+LDLR
Sbjct: 193 AESMPNLRHIQLFGNEINNTGLNAILDGCPHVEHLDLR 230