BLASTX nr result

ID: Coptis24_contig00013078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013078
         (1608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532674.1| conserved hypothetical protein [Ricinus comm...   503   e-140
ref|XP_002267271.1| PREDICTED: uncharacterized protein LOC100263...   494   e-137
gb|ABK96426.1| unknown [Populus trichocarpa x Populus deltoides]      486   e-135
ref|XP_002302883.1| predicted protein [Populus trichocarpa] gi|2...   483   e-134
ref|XP_003531312.1| PREDICTED: uncharacterized protein LOC100794...   472   e-130

>ref|XP_002532674.1| conserved hypothetical protein [Ricinus communis]
            gi|223527587|gb|EEF29702.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 404

 Score =  503 bits (1295), Expect = e-140
 Identities = 255/371 (68%), Positives = 295/371 (79%), Gaps = 3/371 (0%)
 Frame = -2

Query: 1574 RNKVSFAYQQTASLVNIKLKWVKDRALDAVVAQEKDLRPVCLLVSTIYSAPSHCLPIYHL 1395
            R +  F YQQT SLVN+KLKWVKDRALD +VA + DL+  CLL S I SAP  CLPIYHL
Sbjct: 18   RCRRGFNYQQTFSLVNVKLKWVKDRALDTLVAGQTDLKATCLLTSIISSAPLCCLPIYHL 77

Query: 1394 SRQRRQLGLPEDLKLSALIRRYPTLFHEIPVNVKGGS-IPWFQLTNEALRLHQEEFDIFQ 1218
            +  RRQL LP DLKLS  IRRYPT+F E  +   GG+ +P FQLT EA  +H+EEF I Q
Sbjct: 78   TPHRRQLCLPHDLKLSTFIRRYPTIFQESHILDSGGTRVPCFQLTPEASNIHKEEFQILQ 137

Query: 1217 KNETDLVQRLQKLLMLTRERILPLQTVEQLKWDMGLPYDYQHSLIPRYSQLFSFVRLPDD 1038
            +N+ DL+QRL KLLMLT++RILPLQT++QLKWD+GLPYDY ++LIP +  LFS VRLPDD
Sbjct: 138  QNQMDLIQRLCKLLMLTKDRILPLQTIDQLKWDLGLPYDYCNTLIPNHPDLFSSVRLPDD 197

Query: 1037 RIGLKLIYWDECLAISQLQKNALASIYGKSDQQ--LAFPVGFTRGFGLKRKCMKWLEEWQ 864
            RIGLKL  WD+ LA+SQLQKNA      +  +   LAFP+ FTRGFGLKRKCM+WLEEWQ
Sbjct: 198  RIGLKLQMWDDTLAVSQLQKNAAFQQKEEDVKSGCLAFPIRFTRGFGLKRKCMEWLEEWQ 257

Query: 863  RLPYTSPYTDASHLDSRTDVFEKRIVGVFHELLNLMIQRKTERRNMSNLRKPLGLPQKFT 684
             LPYTSPY+DASHLD RTDV EKRIVGVFHELL+L IQ+KTER+N+SNLRK L LPQKFT
Sbjct: 258  SLPYTSPYSDASHLDPRTDVSEKRIVGVFHELLHLTIQKKTERKNVSNLRKSLSLPQKFT 317

Query: 683  KVFGRHPGIFYISQKCSTQTVILREAYDRQELLNKHPLVAIRESYATLMNIGFLNRSRGL 504
            KVF RHP IFYIS KC TQTV+LREAYD Q+LL KHPLV IRE YA+LM+ G L+RSRGL
Sbjct: 318  KVFERHPAIFYISMKCDTQTVVLREAYDGQQLLQKHPLVDIRERYASLMSRGLLDRSRGL 377

Query: 503  YKKSTPEDQED 471
            YKK+T    ED
Sbjct: 378  YKKNTTASLED 388


>ref|XP_002267271.1| PREDICTED: uncharacterized protein LOC100263505 [Vitis vinifera]
          Length = 428

 Score =  494 bits (1271), Expect = e-137
 Identities = 252/395 (63%), Positives = 301/395 (76%), Gaps = 3/395 (0%)
 Frame = -2

Query: 1580 HERNKVSFAYQQTASLVNIKLKWVKDRALDAVVAQEKDLRPVCLLVSTIYSAPSHCLPIY 1401
            H+R    F YQQ  SLVN+KLKWVKDRALDAVVA E++LR  C LVS I S P    PIY
Sbjct: 19   HQRG---FIYQQKFSLVNVKLKWVKDRALDAVVAGERNLRATCTLVSIISSDPHDGFPIY 75

Query: 1400 HLSRQRRQLGLPEDLKLSALIRRYPTLFHEIPVNVKGGS-IPWFQLTNEALRLHQEEFDI 1224
             LSR R QLGLP D+KL+  IRR+P +F E  V   GG+ +PWF+LT EAL LH E  + 
Sbjct: 76   RLSRHRGQLGLPHDIKLATFIRRFPNIFDEFHVLDSGGTRVPWFRLTPEALNLHHEALNA 135

Query: 1223 FQKNETDLVQRLQKLLMLTRERILPLQTVEQLKWDMGLPYDYQHSLIPRYSQLFSFVRLP 1044
             Q+NE DL+ RL+KLLMLT ER+LPLQT++QLKWD GLPYDY HSL+P Y +LFS V LP
Sbjct: 136  LQQNEMDLLNRLRKLLMLTCERMLPLQTIDQLKWDFGLPYDYCHSLVPSYPELFSMVHLP 195

Query: 1043 DDRIGLKLIYWDECLAISQLQKNALASIYGKSDQQ--LAFPVGFTRGFGLKRKCMKWLEE 870
            DDR+GLKLI WD+ LA+SQLQKNA  +   +  +   L FP+ FTRGFGLKRKCMKWLEE
Sbjct: 196  DDRVGLKLISWDDRLAVSQLQKNAAFNQKEEDVRNGCLTFPIRFTRGFGLKRKCMKWLEE 255

Query: 869  WQRLPYTSPYTDASHLDSRTDVFEKRIVGVFHELLNLMIQRKTERRNMSNLRKPLGLPQK 690
            WQ LPYTSPYTDASHLD RTDV EKRIVGVFHELL+L +Q++TER+N+SNLRKPL  PQK
Sbjct: 256  WQMLPYTSPYTDASHLDPRTDVSEKRIVGVFHELLHLTLQKRTERKNVSNLRKPLSCPQK 315

Query: 689  FTKVFGRHPGIFYISQKCSTQTVILREAYDRQELLNKHPLVAIRESYATLMNIGFLNRSR 510
            FTKVF RHPGIFYIS+K  +QTV+LREAYD+Q+LL KHP+V IRE +A +M  G L+RSR
Sbjct: 316  FTKVFERHPGIFYISKKSDSQTVVLREAYDQQQLLQKHPIVEIRERFANMMEKGLLDRSR 375

Query: 509  GLYKKSTPEDQEDDDHQNIISDYELSTAEDQEEED 405
            GLYK+S     E D  +++  D EL+  E + E +
Sbjct: 376  GLYKRSGINGLEVDPSKDVYYD-ELNDNERKSESE 409


>gb|ABK96426.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 413

 Score =  486 bits (1251), Expect = e-135
 Identities = 248/371 (66%), Positives = 291/371 (78%), Gaps = 5/371 (1%)
 Frame = -2

Query: 1568 KVSFAYQQTASLVNIKLKWVKDRALDAVVAQEKDLRPVCLLVSTIYSAPSHCLPIYHLSR 1389
            +  + YQQ  SLVN+KLKWVKDR LDAVVA + DL+  C+LVS I SA   CLPIY L  
Sbjct: 21   RTGYNYQQKFSLVNVKLKWVKDRVLDAVVADQADLKAACILVSIISSARGCCLPIYRLRL 80

Query: 1388 QRRQLGLPEDLKLSALIRRYPTLFHEIPVNVKGGS-IPWFQLTNEALRLHQEEFDIFQKN 1212
             R QLGLP DLKLS  IRRYP +F E  V   GG+ +P FQLT EAL L +EE  I ++N
Sbjct: 81   HRGQLGLPHDLKLSTFIRRYPNIFCESHVLDSGGTRVPCFQLTAEALDLRREELGILEQN 140

Query: 1211 ETDLVQRLQKLLMLTRERILPLQTVEQLKWDMGLPYDYQHSLIPRYSQLFSFVRLPDDRI 1032
            + DLV+RL KLLMLTR+R LPLQT++QL+WDMGLPYDY  SLIP +  LFS VRLPDDR+
Sbjct: 141  QIDLVERLCKLLMLTRDRTLPLQTIDQLRWDMGLPYDYFDSLIPLHPDLFSSVRLPDDRV 200

Query: 1031 GLKLIYWDECLAISQLQKNALASIYGKSDQQ----LAFPVGFTRGFGLKRKCMKWLEEWQ 864
            GLKL  WD+ LA+SQLQKNA  ++  K +      LAFPVGFTRGFGLKRKCM+WLEEWQ
Sbjct: 201  GLKLQVWDDRLAVSQLQKNA--ALQQKEEDMKNGCLAFPVGFTRGFGLKRKCMEWLEEWQ 258

Query: 863  RLPYTSPYTDASHLDSRTDVFEKRIVGVFHELLNLMIQRKTERRNMSNLRKPLGLPQKFT 684
            RLPYTSPY+DAS LD RTDV EKRIVGVFHELL+L + ++TER+N+SNLRKPL LPQKFT
Sbjct: 259  RLPYTSPYSDASDLDPRTDVSEKRIVGVFHELLHLTVHKRTERKNVSNLRKPLSLPQKFT 318

Query: 683  KVFGRHPGIFYISQKCSTQTVILREAYDRQELLNKHPLVAIRESYATLMNIGFLNRSRGL 504
            +VF RHPGIFYIS+K  TQTV+LREAYDRQ+LL+KHPLV IR  YA++M  GFL+RSRGL
Sbjct: 319  RVFERHPGIFYISKKIDTQTVVLREAYDRQQLLHKHPLVDIRGKYASMMRKGFLDRSRGL 378

Query: 503  YKKSTPEDQED 471
            YKK+     E+
Sbjct: 379  YKKTASSGPEE 389


>ref|XP_002302883.1| predicted protein [Populus trichocarpa] gi|222844609|gb|EEE82156.1|
            predicted protein [Populus trichocarpa]
          Length = 413

 Score =  483 bits (1243), Expect = e-134
 Identities = 247/370 (66%), Positives = 290/370 (78%), Gaps = 4/370 (1%)
 Frame = -2

Query: 1568 KVSFAYQQTASLVNIKLKWVKDRALDAVVAQEKDLRPVCLLVSTIYSAPSHCLPIYHLSR 1389
            +  + YQQ  SLVN+KLKWVKDR LDAVVA + DL+  C+LVS I SA   CLPIY L  
Sbjct: 21   RTGYNYQQKFSLVNVKLKWVKDRVLDAVVADQADLKAACILVSIISSARGCCLPIYRLRL 80

Query: 1388 QRRQLGLPEDLKLSALIRRYPTLFHEIPVNVKGGS-IPWFQLTNEALRLHQEEFDIFQKN 1212
             R QLGLP DLKLS  IRRYP +F E  V   GG+ +P FQLT EAL L +EE  I ++N
Sbjct: 81   HRGQLGLPHDLKLSTFIRRYPNIFCESHVLDSGGTRVPCFQLTAEALDLRREELGILEQN 140

Query: 1211 ETDLVQRLQKLLMLTRERILPLQTVEQLKWDMGLPYDYQHSLIPRYSQLFSFVRLPDDRI 1032
            + DLV+RL KLLMLTR+R LPLQT++QL+WDMGLPYDY  SLIP +  LFS VRLPDDR+
Sbjct: 141  QIDLVERLCKLLMLTRDRTLPLQTIDQLRWDMGLPYDYFDSLIPLHPDLFSSVRLPDDRV 200

Query: 1031 GLKLIYWDECLAISQLQKNALASIYGKSDQQ---LAFPVGFTRGFGLKRKCMKWLEEWQR 861
            GLKL  WD+ LA+SQLQKNA A    + D +   LAFPVGFTRGFGLKRKCM+WLEEWQR
Sbjct: 201  GLKLQVWDDRLAVSQLQKNA-AFQQKEEDMKNGCLAFPVGFTRGFGLKRKCMEWLEEWQR 259

Query: 860  LPYTSPYTDASHLDSRTDVFEKRIVGVFHELLNLMIQRKTERRNMSNLRKPLGLPQKFTK 681
            LPYTSPY+DAS LD RTDV EKRIVGVFHELL+L + ++TER+N+SNLR PL LPQKFT+
Sbjct: 260  LPYTSPYSDASDLDPRTDVSEKRIVGVFHELLHLTVHKRTERKNVSNLRNPLSLPQKFTR 319

Query: 680  VFGRHPGIFYISQKCSTQTVILREAYDRQELLNKHPLVAIRESYATLMNIGFLNRSRGLY 501
            VF RHPGIFYIS+K  TQTV+LREAYDRQ+L++KHPLV IR  YA++M  GFL+RSRGLY
Sbjct: 320  VFERHPGIFYISKKSDTQTVVLREAYDRQQLIHKHPLVDIRGKYASMMRKGFLDRSRGLY 379

Query: 500  KKSTPEDQED 471
            KK+     E+
Sbjct: 380  KKTASSGPEE 389


>ref|XP_003531312.1| PREDICTED: uncharacterized protein LOC100794689 [Glycine max]
          Length = 425

 Score =  472 bits (1215), Expect = e-130
 Identities = 236/390 (60%), Positives = 296/390 (75%), Gaps = 5/390 (1%)
 Frame = -2

Query: 1559 FAYQQTASLVNIKLKWVKDRALDAVVAQEKDLRPVCLLVSTIYSAPSHCLPIYHLSRQRR 1380
            + YQQ  SLVNIKLKWVKDR LDAVV  ++DL+   +LVS IYS+   CLPIYHLSR R 
Sbjct: 22   YIYQQKFSLVNIKLKWVKDRTLDAVVTGQRDLKAAGILVSIIYSSSECCLPIYHLSRHRG 81

Query: 1379 QLGLPEDLKLSALIRRYPTLFHEIPVNVKGGS-IPWFQLTNEALRLHQEEFDIFQKNETD 1203
            QLGLP DLKLS  IRRYP +F+E      GGS +P F L+ EAL LH EE +I Q+N+ +
Sbjct: 82   QLGLPSDLKLSTFIRRYPNIFNESSFLDSGGSPVPCFSLSPEALELHHEEVNILQQNQLE 141

Query: 1202 LVQRLQKLLMLTRERILPLQTVEQLKWDMGLPYDYQHSLIPRYSQLFSFVRLPDDRIGLK 1023
            L  RL KLLMLT +RILPLQT++QLKWD+GLPYDYQHS +P + + F +VRLPDDRIGLK
Sbjct: 142  LRDRLCKLLMLTSDRILPLQTIDQLKWDLGLPYDYQHSFVPNHPESFLYVRLPDDRIGLK 201

Query: 1022 LIYWDECLAISQLQKNALASIYGKSDQ----QLAFPVGFTRGFGLKRKCMKWLEEWQRLP 855
            L++WD+ LAIS+LQKN   S+  K++      LAFP+ FTRGFGLKRKCM+WL++WQ+LP
Sbjct: 202  LLFWDDKLAISELQKNT--SLQQKAEDIKNGSLAFPISFTRGFGLKRKCMEWLKDWQKLP 259

Query: 854  YTSPYTDASHLDSRTDVFEKRIVGVFHELLNLMIQRKTERRNMSNLRKPLGLPQKFTKVF 675
            YTSPY +ASHLD RTDV EKRIVGVFHELL+L + ++TER+N+SNLR+PL LPQKFTKVF
Sbjct: 260  YTSPYINASHLDPRTDVSEKRIVGVFHELLHLTLHKQTERKNVSNLRRPLALPQKFTKVF 319

Query: 674  GRHPGIFYISQKCSTQTVILREAYDRQELLNKHPLVAIRESYATLMNIGFLNRSRGLYKK 495
             RHPGIFYIS++  TQTV+LREAY+ QE +  H LV IRE +A+L+  G L+RS+G+YKK
Sbjct: 320  ERHPGIFYISKRSDTQTVVLREAYNGQEPVQNHALVQIREEFASLLKKGLLDRSKGVYKK 379

Query: 494  STPEDQEDDDHQNIISDYELSTAEDQEEED 405
            S   +  +   + +    + +    Q+E D
Sbjct: 380  SRHTNLVEGFRKEVCIAKKTNQLSSQDESD 409


Top