BLASTX nr result

ID: Coptis24_contig00013074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013074
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264728.2| PREDICTED: cellulose synthase-like protein G...   102   5e-20
emb|CBI34522.3| unnamed protein product [Vitis vinifera]              102   5e-20
gb|AFZ78596.1| cellulose synthase-like protein [Populus tomentosa]     99   3e-19
ref|XP_003631403.1| PREDICTED: cellulose synthase-like protein G...    99   3e-19
emb|CBI34529.3| unnamed protein product [Vitis vinifera]               99   3e-19

>ref|XP_002264728.2| PREDICTED: cellulose synthase-like protein G3 [Vitis vinifera]
          Length = 722

 Score =  102 bits (253), Expect = 5e-20
 Identities = 50/62 (80%), Positives = 54/62 (87%)
 Frame = +3

Query: 348 QVLLESAKVKDITGHRMPNLVYISREKNKTSPHRFKAGALNVLLRVSATMTNAPIVLTQD 527
           QVLLE  K KD+TGH MPNLVYISREK+  SPHRFKAGALNVLLRVSATMTNAP++LT D
Sbjct: 241 QVLLEHGKDKDVTGHGMPNLVYISREKSTDSPHRFKAGALNVLLRVSATMTNAPVILTLD 300

Query: 528 CD 533
            D
Sbjct: 301 SD 302



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/50 (52%), Positives = 40/50 (80%)
 Frame = +1

Query: 4   IVDRCPSAYFQSTHAHIRSYKTEEIKMMYESMKMKVESVVDRGSIEDEFI 153
           +V+RCP A+F S++   R  +T++IKMMYESM+++VE+VV RGSI  ++I
Sbjct: 167 VVERCPKAHFGSSNPS-RFPETDQIKMMYESMRVRVENVVKRGSISHDYI 215


>emb|CBI34522.3| unnamed protein product [Vitis vinifera]
          Length = 659

 Score =  102 bits (253), Expect = 5e-20
 Identities = 50/62 (80%), Positives = 54/62 (87%)
 Frame = +3

Query: 348 QVLLESAKVKDITGHRMPNLVYISREKNKTSPHRFKAGALNVLLRVSATMTNAPIVLTQD 527
           QVLLE  K KD+TGH MPNLVYISREK+  SPHRFKAGALNVLLRVSATMTNAP++LT D
Sbjct: 178 QVLLEHGKDKDVTGHGMPNLVYISREKSTDSPHRFKAGALNVLLRVSATMTNAPVILTLD 237

Query: 528 CD 533
            D
Sbjct: 238 SD 239



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/50 (52%), Positives = 40/50 (80%)
 Frame = +1

Query: 4   IVDRCPSAYFQSTHAHIRSYKTEEIKMMYESMKMKVESVVDRGSIEDEFI 153
           +V+RCP A+F S++   R  +T++IKMMYESM+++VE+VV RGSI  ++I
Sbjct: 104 VVERCPKAHFGSSNPS-RFPETDQIKMMYESMRVRVENVVKRGSISHDYI 152


>gb|AFZ78596.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 739

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/62 (74%), Positives = 53/62 (85%)
 Frame = +3

Query: 348 QVLLESAKVKDITGHRMPNLVYISREKNKTSPHRFKAGALNVLLRVSATMTNAPIVLTQD 527
           QVLL+++K KDI G+ MPNL+Y+SREKNK SPH FKAGALN LLRVS  MTNAPI+LT D
Sbjct: 252 QVLLDASKDKDIAGYSMPNLIYVSREKNKASPHHFKAGALNALLRVSGCMTNAPIILTLD 311

Query: 528 CD 533
           CD
Sbjct: 312 CD 313


>ref|XP_003631403.1| PREDICTED: cellulose synthase-like protein G3-like [Vitis vinifera]
          Length = 527

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/62 (80%), Positives = 52/62 (83%)
 Frame = +3

Query: 348 QVLLESAKVKDITGHRMPNLVYISREKNKTSPHRFKAGALNVLLRVSATMTNAPIVLTQD 527
           QVLLE  K KDITGH MPNLVYISREK   SPH FKAGALNVLLRVSATMTNAP++LT D
Sbjct: 53  QVLLERGKDKDITGHDMPNLVYISREKRMDSPHHFKAGALNVLLRVSATMTNAPVILTLD 112

Query: 528 CD 533
            D
Sbjct: 113 GD 114


>emb|CBI34529.3| unnamed protein product [Vitis vinifera]
          Length = 1323

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/62 (80%), Positives = 52/62 (83%)
 Frame = +3

Query: 348  QVLLESAKVKDITGHRMPNLVYISREKNKTSPHRFKAGALNVLLRVSATMTNAPIVLTQD 527
            QVLLE  K KDITGH MPNLVYISREK   SPH FKAGALNVLLRVSATMTNAP++LT D
Sbjct: 967  QVLLERGKDKDITGHDMPNLVYISREKRMDSPHHFKAGALNVLLRVSATMTNAPVILTLD 1026

Query: 528  CD 533
             D
Sbjct: 1027 GD 1028



 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 48/62 (77%), Positives = 51/62 (82%)
 Frame = +3

Query: 348 QVLLESAKVKDITGHRMPNLVYISREKNKTSPHRFKAGALNVLLRVSATMTNAPIVLTQD 527
           QVLLE+ + KDITG  MPNLVY SREKN   PH FKAGALNVLLRVSATMTNAPI+LT D
Sbjct: 242 QVLLEADRDKDITGLTMPNLVYASREKNMNLPHHFKAGALNVLLRVSATMTNAPILLTLD 301

Query: 528 CD 533
            D
Sbjct: 302 SD 303


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