BLASTX nr result

ID: Coptis24_contig00013056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013056
         (877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22534.3| unnamed protein product [Vitis vinifera]              109   7e-22
ref|XP_002523309.1| conserved hypothetical protein [Ricinus comm...   108   1e-21
ref|XP_002268340.1| PREDICTED: uncharacterized protein LOC100244...   108   1e-21
emb|CAN66869.1| hypothetical protein VITISV_013673 [Vitis vinifera]   107   3e-21
ref|XP_002331838.1| predicted protein [Populus trichocarpa] gi|2...   107   4e-21

>emb|CBI22534.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score =  109 bits (273), Expect = 7e-22
 Identities = 59/88 (67%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
 Frame = +1

Query: 109 GGLMNLVKVFKMQQMDGIRLEKLRGGAQERLVREREGQVPLILEEQRRRKRQINEARTAP 288
           GGLMN+VKVFKMQQMDG+RLEKLRGGAQERL+ EREGQ+PLILE+QRRRK  + E     
Sbjct: 221 GGLMNVVKVFKMQQMDGLRLEKLRGGAQERLIHEREGQIPLILEDQRRRKIHVEET---- 276

Query: 289 SPAPVSVPGGTPYKDVLVGKGSI-WPYT 369
              PV VP  TPY+DVLVG   + W  T
Sbjct: 277 --MPVVVP--TPYRDVLVGHSDMPWKVT 300


>ref|XP_002523309.1| conserved hypothetical protein [Ricinus communis]
           gi|223537397|gb|EEF39025.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 297

 Score =  108 bits (271), Expect = 1e-21
 Identities = 54/80 (67%), Positives = 64/80 (80%)
 Frame = +1

Query: 109 GGLMNLVKVFKMQQMDGIRLEKLRGGAQERLVREREGQVPLILEEQRRRKRQINEARTAP 288
           GGL N+VKVFKMQQ+DG+RLEKLRGGAQERL+++REGQ+PLI EE RRRK  I E +  P
Sbjct: 221 GGLTNVVKVFKMQQIDGLRLEKLRGGAQERLIQQREGQLPLIAEEHRRRKMIIEETKAVP 280

Query: 289 SPAPVSVPGGTPYKDVLVGK 348
            P PV     TPYKDVL+G+
Sbjct: 281 VPDPVP----TPYKDVLIGQ 296


>ref|XP_002268340.1| PREDICTED: uncharacterized protein LOC100244979 [Vitis vinifera]
          Length = 293

 Score =  108 bits (271), Expect = 1e-21
 Identities = 57/79 (72%), Positives = 64/79 (81%)
 Frame = +1

Query: 109 GGLMNLVKVFKMQQMDGIRLEKLRGGAQERLVREREGQVPLILEEQRRRKRQINEARTAP 288
           GGLMN+VKVFKMQQMDG+RLEKLRGGAQERL+ EREGQ+PLILE+QRRRK  + E     
Sbjct: 221 GGLMNVVKVFKMQQMDGLRLEKLRGGAQERLIHEREGQIPLILEDQRRRKIHVEET---- 276

Query: 289 SPAPVSVPGGTPYKDVLVG 345
              PV VP  TPY+DVLVG
Sbjct: 277 --MPVVVP--TPYRDVLVG 291


>emb|CAN66869.1| hypothetical protein VITISV_013673 [Vitis vinifera]
          Length = 755

 Score =  107 bits (268), Expect = 3e-21
 Identities = 57/81 (70%), Positives = 64/81 (79%)
 Frame = +1

Query: 109 GGLMNLVKVFKMQQMDGIRLEKLRGGAQERLVREREGQVPLILEEQRRRKRQINEARTAP 288
           GGLMN+VKVFKMQQMDG+RLEKLRGGAQERL+ EREGQ+PLILE+QRRRK  + E     
Sbjct: 221 GGLMNVVKVFKMQQMDGLRLEKLRGGAQERLIHEREGQIPLILEDQRRRKIHVEE----- 275

Query: 289 SPAPVSVPGGTPYKDVLVGKG 351
              PV VP  TPY+DVL  KG
Sbjct: 276 -XMPVVVP--TPYRDVLGSKG 293


>ref|XP_002331838.1| predicted protein [Populus trichocarpa] gi|222875076|gb|EEF12207.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  107 bits (267), Expect = 4e-21
 Identities = 56/80 (70%), Positives = 62/80 (77%)
 Frame = +1

Query: 109 GGLMNLVKVFKMQQMDGIRLEKLRGGAQERLVREREGQVPLILEEQRRRKRQINEARTAP 288
           GGL N+VKVFKMQQ+DG+RLEKLRGGAQERL+REREG  PLILEE+RRRK    E R  P
Sbjct: 219 GGLANVVKVFKMQQIDGLRLEKLRGGAQERLIREREGHSPLILEEERRRKMIAAETRATP 278

Query: 289 SPAPVSVPGGTPYKDVLVGK 348
            PA       TPYKDVLVG+
Sbjct: 279 LPAT------TPYKDVLVGQ 292


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