BLASTX nr result

ID: Coptis24_contig00013046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013046
         (1138 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21389.3| unnamed protein product [Vitis vinifera]              241   3e-61
ref|XP_002306480.1| predicted protein [Populus trichocarpa] gi|2...   236   8e-60
ref|XP_002278347.1| PREDICTED: OTU domain-containing protein 3-l...   234   3e-59
ref|XP_003551005.1| PREDICTED: OTU domain-containing protein 3-l...   226   8e-57
gb|AAN17412.1| putative protein [Arabidopsis thaliana] gi|250842...   219   8e-55

>emb|CBI21389.3| unnamed protein product [Vitis vinifera]
          Length = 385

 Score =  241 bits (614), Expect = 3e-61
 Identities = 136/281 (48%), Positives = 176/281 (62%), Gaps = 7/281 (2%)
 Frame = +1

Query: 1   NMELQAASLVTRSNICVHRIMEPRWYIRNFHYH-ARIIHLSYHNEEHYNSVRSKEDPCNG 177
           +MELQAASLVTRSNIC+HR M PRWYI+NF+   AR+IHLSYH+ EHYNSVR KEDPC+G
Sbjct: 110 HMELQAASLVTRSNICIHRHMSPRWYIQNFNASGARMIHLSYHDGEHYNSVRLKEDPCDG 169

Query: 178 PAQTIVIKADDDLSATSREARGVPN-SKGGHSECIGDAGIIKLVMAGSGCNSVNRVEQVL 354
           PA+ I+IKAD DLS  S + +G  + SK G    I DAG IKLVM GSGC +  +VEQVL
Sbjct: 170 PARPIIIKADTDLSVASHQVKGASSKSKSGAGRNIIDAGSIKLVMVGSGCENAEKVEQVL 229

Query: 355 QEVDGDANAAIEFLIALQGSEDDIAGDDEQLNMLVTGLDYFXXXXXXXXXXXXXXKTCER 534
            E+ GD +AAIE+LIA + +E+D+  +D+ L    T                    +C++
Sbjct: 230 VELSGDVDAAIEYLIAERETEEDLVENDKLLCQTDTSYGENDDRKVERGKEILENNSCKQ 289

Query: 535 DAMS-----FLDDNSTQRMDTLVNYARIPENKFCPCGSKKKFKACCGTVNGHSSSGSVDK 699
           D+ S       DD+S +R     +  +IP N+ CPCGSKKK K CCG+V G  S+  +  
Sbjct: 290 DSSSNSIGQAHDDSSCRR-----DEKKIPRNQVCPCGSKKKCKTCCGSVAGRPSTKFLVN 344

Query: 700 HRVASGKVRVQKKQSRKSGSAKAAHLGKSEVNLPDMGALCI 822
             V S K R ++KQ +K  SAK     +S    PD+GAL I
Sbjct: 345 QTVDSSKGRKERKQGKKGRSAKFVPSARSSEGPPDVGALSI 385


>ref|XP_002306480.1| predicted protein [Populus trichocarpa] gi|222855929|gb|EEE93476.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score =  236 bits (602), Expect = 8e-60
 Identities = 139/285 (48%), Positives = 174/285 (61%), Gaps = 11/285 (3%)
 Frame = +1

Query: 1   NMELQAASLVTRSNICVHRIMEPRWYIRNFHYH-ARIIHLSYHNEEHYNSVRSKEDPCNG 177
           +MELQAASLVT SNICVHR M PRWYIRNF  H AR++HLSYH+EEHYNSVRSK+DPCNG
Sbjct: 109 HMELQAASLVTHSNICVHRYMSPRWYIRNFDQHGARMVHLSYHDEEHYNSVRSKDDPCNG 168

Query: 178 PAQTIVIKADDDLSATSREARGVPNSKGGHSECIGDAGIIKLVMAGSGCNSVNRVEQVLQ 357
           PAQ I+IK D DLSATS +A+ V ++K G ++   DAG +KLVMAGSGC +  +V+QVL 
Sbjct: 169 PAQPIIIKVDADLSATSVQAKAVSSTKAGIAKDSFDAGSLKLVMAGSGCENAEKVKQVLL 228

Query: 358 EVDGDANAAIEFLIALQGSEDDIAGDDEQLNMLVTGLDYFXXXXXXXXXXXXXXKTCERD 537
           EVDGD +AAIEFLIA                                          E++
Sbjct: 229 EVDGDVDAAIEFLIA------------------------------------------EQE 246

Query: 538 AMSFLDDNSTQRMDTLVNY----------ARIPENKFCPCGSKKKFKACCGTVNGHSSSG 687
           + SF  +N++   DT ++Y           +IP NK C CGSKKK KA CG V G SS+ 
Sbjct: 247 SDSFSAENNSLCSDTNISYENLMVLYTFRKKIPRNKDCSCGSKKKHKAYCGAVKGRSSTK 306

Query: 688 SVDKHRVASGKVRVQKKQSRKSGSAKAAHLGKSEVNLPDMGALCI 822
             D+ +V   K R + K ++K G A++     S+  LPDMGALCI
Sbjct: 307 IADR-KVDFRKDRKETKHNKK-GHAESVPSSGSDGWLPDMGALCI 349


>ref|XP_002278347.1| PREDICTED: OTU domain-containing protein 3-like [Vitis vinifera]
          Length = 467

 Score =  234 bits (597), Expect = 3e-59
 Identities = 132/276 (47%), Positives = 172/276 (62%), Gaps = 7/276 (2%)
 Frame = +1

Query: 1   NMELQAASLVTRSNICVHRIMEPRWYIRNFHYH-ARIIHLSYHNEEHYNSVRSKEDPCNG 177
           +MELQAASLVTRSNIC+HR M PRWYI+NF+   AR+IHLSYH+ EHYNSVR KEDPC+G
Sbjct: 110 HMELQAASLVTRSNICIHRHMSPRWYIQNFNASGARMIHLSYHDGEHYNSVRLKEDPCDG 169

Query: 178 PAQTIVIKADDDLSATSREARGVPN-SKGGHSECIGDAGIIKLVMAGSGCNSVNRVEQVL 354
           PA+ I+IKAD DLS  S + +G  + SK G    I DAG IKLVM GSGC +  +VEQVL
Sbjct: 170 PARPIIIKADTDLSVASHQVKGASSKSKSGAGRNIIDAGSIKLVMVGSGCENAEKVEQVL 229

Query: 355 QEVDGDANAAIEFLIALQGSEDDIAGDDEQLNMLVTGLDYFXXXXXXXXXXXXXXKTCER 534
            E+ GD +AAIE+LIA + +E+D+  +D+ L    T                    +C++
Sbjct: 230 VELSGDVDAAIEYLIAERETEEDLVENDKLLCQTDTSYGENDDRKVERGKEILENNSCKQ 289

Query: 535 DAMS-----FLDDNSTQRMDTLVNYARIPENKFCPCGSKKKFKACCGTVNGHSSSGSVDK 699
           D+ S       DD+S +R     +  +IP N+ CPCGSKKK K CCG+V G  S+  +  
Sbjct: 290 DSSSNSIGQAHDDSSCRR-----DEKKIPRNQVCPCGSKKKCKTCCGSVAGRPSTKFLVN 344

Query: 700 HRVASGKVRVQKKQSRKSGSAKAAHLGKSEVNLPDM 807
             V S K R ++KQ +K  SAK     +S    PD+
Sbjct: 345 QTVDSSKGRKERKQGKKGRSAKFVPSARSSEGPPDV 380


>ref|XP_003551005.1| PREDICTED: OTU domain-containing protein 3-like [Glycine max]
          Length = 382

 Score =  226 bits (576), Expect = 8e-57
 Identities = 133/277 (48%), Positives = 167/277 (60%), Gaps = 3/277 (1%)
 Frame = +1

Query: 1   NMELQAASLVTRSNICVHRIMEPRWYIRNFHYHA-RIIHLSYHNEEHYNSVRSKEDPCNG 177
           +MELQAASLVTRSNIC+HR M PRWYIRNF     R+IHLSYH+ EHYNSVR K+DPC+G
Sbjct: 110 HMELQAASLVTRSNICIHRNMSPRWYIRNFDNRGVRMIHLSYHDGEHYNSVRLKDDPCDG 169

Query: 178 PAQTIVIKADDDLSATSREARGVPNSKGGHSECIG-DAGIIKLVMAGSGCNSVNRVEQVL 354
            A+ IVI+AD DLS  S + + V N   G +       G IKLVMAG+GC +  +VEQ+L
Sbjct: 170 AARPIVIEADADLSVPSHQTKVVGNKFHGRAGWEAFQPGSIKLVMAGTGCENAEKVEQIL 229

Query: 355 QEVDGDANAAIEFLIALQGSEDDIAGDDEQLNMLVT-GLDYFXXXXXXXXXXXXXXKTCE 531
           ++V+GD +AAIEFLIA QG+E+  A  D   N   T G D                   E
Sbjct: 230 EQVNGDVDAAIEFLIAEQGTEECSANSDSLPNQANTCGHDENENHKQHKEDMVEESTNDE 289

Query: 532 RDAMSFLDDNSTQRMDTLVNYARIPENKFCPCGSKKKFKACCGTVNGHSSSGSVDKHRVA 711
            +  S      T    TL    +IP NK CPCGS+KK+KACCG+  G  S+  V      
Sbjct: 290 SNNSS----KKTNTYTTLQPNDKIPRNKVCPCGSQKKYKACCGSALGKQSAKFVVHQAAD 345

Query: 712 SGKVRVQKKQSRKSGSAKAAHLGKSEVNLPDMGALCI 822
           S K + ++KQ +K  SAKA    + ++  PDMGALCI
Sbjct: 346 SKKGKKERKQGKKGISAKAEVPSEYDLVTPDMGALCI 382


>gb|AAN17412.1| putative protein [Arabidopsis thaliana] gi|25084238|gb|AAN72203.1|
           putative protein [Arabidopsis thaliana]
          Length = 375

 Score =  219 bits (559), Expect = 8e-55
 Identities = 129/277 (46%), Positives = 166/277 (59%), Gaps = 3/277 (1%)
 Frame = +1

Query: 1   NMELQAASLVTRSNICVHRIMEPRWYIRNFH-YHARIIHLSYHNEEHYNSVRSKEDPCNG 177
           NMELQAASLVTRSNIC+HR M PRWYIRNF     R+IHLSYH+ EHYNSVRSKED C G
Sbjct: 108 NMELQAASLVTRSNICIHRNMSPRWYIRNFEDTRTRMIHLSYHDGEHYNSVRSKEDACGG 167

Query: 178 PAQTIVIKADDDLSATSREARGVPN-SKGGHSECIGDAGIIKLVMAGSGCNSVNRVEQVL 354
           PA+ +VI+AD  +SA S++A+   + SK    +C  +AG IK+VM+GS C++  + EQVL
Sbjct: 168 PARPVVIEADAKVSAASKQAKATESKSKNKADKCHVNAGAIKVVMSGSCCDNTEKAEQVL 227

Query: 355 QEVDGDANAAIEFLIALQGSEDDIAGDDEQLNMLVTGLDYFXXXXXXXXXXXXXXKTCER 534
            +V+GD +AAIEFLIA QG E     D E  +   T                   +  E 
Sbjct: 228 LQVNGDVDAAIEFLIADQGMESLTENDTETASASDTINPKHASDSPMENTEQAREELIEE 287

Query: 535 DAMSFLDDNSTQ-RMDTLVNYARIPENKFCPCGSKKKFKACCGTVNGHSSSGSVDKHRVA 711
           ++ S  +  + Q +  T  +  +IP NK CPCGSKKK+K+CCGT  G SS   +    + 
Sbjct: 288 ESASGNNSETVQAKCTTQTDDKKIPRNKTCPCGSKKKYKSCCGTATGRSSVKLLVSQTME 347

Query: 712 SGKVRVQKKQSRKSGSAKAAHLGKSEVNLPDMGALCI 822
           S K R   K  R+  S       + E N PD+GALCI
Sbjct: 348 SKKGR---KNLRRGTS------NEVEANAPDVGALCI 375


Top