BLASTX nr result

ID: Coptis24_contig00013029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013029
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ44452.1| hypothetical protein OsJ_29064 [Oryza sativa Japo...    64   1e-08
gb|EAZ08791.1| hypothetical protein OsI_31051 [Oryza sativa Indi...    64   1e-08
ref|NP_001144389.1| uncharacterized protein LOC100277317 [Zea ma...    61   1e-08
ref|XP_002462273.1| hypothetical protein SORBIDRAFT_02g022900 [S...    61   2e-08
dbj|BAK05978.1| predicted protein [Hordeum vulgare subsp. vulgare]     58   8e-08

>gb|EAZ44452.1| hypothetical protein OsJ_29064 [Oryza sativa Japonica Group]
          Length = 101

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/48 (58%), Positives = 35/48 (72%)
 Frame = +3

Query: 45  AELITRIFAQLDCTGLVHLSLVCKQWYIDSTELREGWKNEY*EACYHF 188
           A++I R+F+QLDC  L+  SLVC+QWY DS ELRE W+ EY EA   F
Sbjct: 27  ADVIARVFSQLDCVDLLSCSLVCRQWYRDSAELREEWRKEYMEAWNQF 74


>gb|EAZ08791.1| hypothetical protein OsI_31051 [Oryza sativa Indica Group]
          Length = 102

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/48 (58%), Positives = 35/48 (72%)
 Frame = +3

Query: 45  AELITRIFAQLDCTGLVHLSLVCKQWYIDSTELREGWKNEY*EACYHF 188
           A++I R+F+QLDC  L+  SLVC+QWY DS ELRE W+ EY EA   F
Sbjct: 28  ADVIARVFSQLDCVDLLSCSLVCRQWYRDSAELREEWRKEYMEAWNQF 75


>ref|NP_001144389.1| uncharacterized protein LOC100277317 [Zea mays]
           gi|195641398|gb|ACG40167.1| hypothetical protein [Zea
           mays]
          Length = 98

 Score = 61.2 bits (147), Expect(2) = 1e-08
 Identities = 27/52 (51%), Positives = 35/52 (67%)
 Frame = +3

Query: 33  LIPSAELITRIFAQLDCTGLVHLSLVCKQWYIDSTELREGWKNEY*EACYHF 188
           L P A ++ R+F+Q+ C  L+  SLVCKQWY DS ELRE W+ EY +A   F
Sbjct: 22  LRPPAHVMARVFSQJXCVDLLSCSLVCKQWYRDSAELREDWRMEYLDAWNQF 73



 Score = 22.7 bits (47), Expect(2) = 1e-08
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 187 FGLSLKKETHPQSTSCSL*GLHS 255
           FGLS+ +E  P   +C++  L S
Sbjct: 73  FGLSVTREPQPLCATCAIRSLRS 95


>ref|XP_002462273.1| hypothetical protein SORBIDRAFT_02g022900 [Sorghum bicolor]
           gi|241925650|gb|EER98794.1| hypothetical protein
           SORBIDRAFT_02g022900 [Sorghum bicolor]
          Length = 97

 Score = 61.2 bits (147), Expect(2) = 2e-08
 Identities = 27/48 (56%), Positives = 34/48 (70%)
 Frame = +3

Query: 45  AELITRIFAQLDCTGLVHLSLVCKQWYIDSTELREGWKNEY*EACYHF 188
           A ++ R+F+QLDC  L+  SLVCKQWY DS ELRE W+ EY +A   F
Sbjct: 25  AHVMARVFSQLDCVDLLSCSLVCKQWYRDSAELREEWRMEYLDAWNQF 72



 Score = 21.9 bits (45), Expect(2) = 2e-08
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 187 FGLSLKKETHPQSTSCSL*GLHS 255
           FGLS+ +E  P   +C++  L S
Sbjct: 72  FGLSVSREPLPLCATCAIRSLRS 94


>dbj|BAK05978.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 95

 Score = 58.2 bits (139), Expect(2) = 8e-08
 Identities = 25/44 (56%), Positives = 34/44 (77%)
 Frame = +3

Query: 45  AELITRIFAQLDCTGLVHLSLVCKQWYIDSTELREGWKNEY*EA 176
           A++I+R+F+QLDC  L+  SLVC+QW  DS ELRE W+ EY +A
Sbjct: 23  ADVISRVFSQLDCVDLLSCSLVCRQWCRDSAELREEWRMEYMDA 66



 Score = 23.1 bits (48), Expect(2) = 8e-08
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 190 GLSLKKETHPQSTSCSL*GLHSW 258
           GL++K +T     +CS+  L +W
Sbjct: 71  GLNVKSDTRSTCPTCSIRSLRTW 93


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