BLASTX nr result

ID: Coptis24_contig00013026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013026
         (872 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529307.1| conserved hypothetical protein [Ricinus comm...   187   2e-45
ref|XP_002284580.1| PREDICTED: uncharacterized protein LOC100245...   184   3e-44
emb|CBI23587.3| unnamed protein product [Vitis vinifera]              181   1e-43
ref|XP_002306835.1| predicted protein [Populus trichocarpa] gi|2...   179   1e-42
gb|ABK92988.1| unknown [Populus trichocarpa]                          179   1e-42

>ref|XP_002529307.1| conserved hypothetical protein [Ricinus communis]
           gi|223531231|gb|EEF33076.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 157

 Score =  187 bits (476), Expect = 2e-45
 Identities = 94/147 (63%), Positives = 108/147 (73%)
 Frame = +2

Query: 11  MGFFSFAGRVLFASVFILSAWQEFNDYGVDGGPAAKALRPKFDVLTGHVTSQLGLQVPDI 190
           M F SF GRVLFASVFILSAWQEFND+GVDGGPAAK+  PKF+V + HV+S  G QVP +
Sbjct: 1   MAFASFVGRVLFASVFILSAWQEFNDFGVDGGPAAKSFAPKFNVFSRHVSSNTGFQVPPV 60

Query: 191 EIKQLVAAAIALKXXXXXXXXXXXXXXAYLLLLHQAIITPIVYDFYNYDLETKEXXXXXX 370
           EIK LVAAAIA+K              AYLLLLHQA++TPI+YDFYNYD + KE      
Sbjct: 61  EIKHLVAAAIAVKGLGGLLFIFGSSFGAYLLLLHQAVVTPILYDFYNYDADKKEFHQLFT 120

Query: 371 XXXXGMALFGALLFFIGMKNSIPKRQV 451
                +ALFGALLFFIGMKNSIP+RQ+
Sbjct: 121 KFTQNLALFGALLFFIGMKNSIPRRQL 147


>ref|XP_002284580.1| PREDICTED: uncharacterized protein LOC100245894 [Vitis vinifera]
          Length = 230

 Score =  184 bits (466), Expect = 3e-44
 Identities = 90/149 (60%), Positives = 112/149 (75%)
 Frame = +2

Query: 5   TTMGFFSFAGRVLFASVFILSAWQEFNDYGVDGGPAAKALRPKFDVLTGHVTSQLGLQVP 184
           T+M F SF GRVLFASVFILSAWQEFN++GVDGGPA ++L PK DV + HV++ +G+QVP
Sbjct: 72  TSMAFVSFVGRVLFASVFILSAWQEFNEFGVDGGPAVESLAPKLDVFSKHVSANVGVQVP 131

Query: 185 DIEIKQLVAAAIALKXXXXXXXXXXXXXXAYLLLLHQAIITPIVYDFYNYDLETKEXXXX 364
           ++EIK LVAA+IALK              A+LLLLHQAI+ PI+YDFYNYD++ KE    
Sbjct: 132 EVEIKNLVAASIALKGLGGLLFIFGSSLGAHLLLLHQAIVIPILYDFYNYDVDKKEFVVL 191

Query: 365 XXXXXXGMALFGALLFFIGMKNSIPKRQV 451
                  +ALFGALLFFIGMKNS+P+RQ+
Sbjct: 192 FLKFTQNLALFGALLFFIGMKNSMPRRQL 220


>emb|CBI23587.3| unnamed protein product [Vitis vinifera]
          Length = 157

 Score =  181 bits (460), Expect = 1e-43
 Identities = 89/147 (60%), Positives = 110/147 (74%)
 Frame = +2

Query: 11  MGFFSFAGRVLFASVFILSAWQEFNDYGVDGGPAAKALRPKFDVLTGHVTSQLGLQVPDI 190
           M F SF GRVLFASVFILSAWQEFN++GVDGGPA ++L PK DV + HV++ +G+QVP++
Sbjct: 1   MAFVSFVGRVLFASVFILSAWQEFNEFGVDGGPAVESLAPKLDVFSKHVSANVGVQVPEV 60

Query: 191 EIKQLVAAAIALKXXXXXXXXXXXXXXAYLLLLHQAIITPIVYDFYNYDLETKEXXXXXX 370
           EIK LVAA+IALK              A+LLLLHQAI+ PI+YDFYNYD++ KE      
Sbjct: 61  EIKNLVAASIALKGLGGLLFIFGSSLGAHLLLLHQAIVIPILYDFYNYDVDKKEFVVLFL 120

Query: 371 XXXXGMALFGALLFFIGMKNSIPKRQV 451
                +ALFGALLFFIGMKNS+P+RQ+
Sbjct: 121 KFTQNLALFGALLFFIGMKNSMPRRQL 147


>ref|XP_002306835.1| predicted protein [Populus trichocarpa] gi|222856284|gb|EEE93831.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  179 bits (453), Expect = 1e-42
 Identities = 92/146 (63%), Positives = 104/146 (71%)
 Frame = +2

Query: 11  MGFFSFAGRVLFASVFILSAWQEFNDYGVDGGPAAKALRPKFDVLTGHVTSQLGLQVPDI 190
           M F SF GRVLFASVFILSA+QEFN++GVDGGPAAKAL+PKF V T HV S  G+QVP+I
Sbjct: 1   MAFTSFLGRVLFASVFILSAYQEFNEFGVDGGPAAKALKPKFGVFTSHVQSHAGIQVPEI 60

Query: 191 EIKQLVAAAIALKXXXXXXXXXXXXXXAYLLLLHQAIITPIVYDFYNYDLETKEXXXXXX 370
           EIK LV+AAI LK              AYLL++HQ I  PI+YDFYNYD E KE      
Sbjct: 61  EIKHLVSAAIFLKGIGGILFIIGSSLGAYLLIIHQLIAIPILYDFYNYDSEEKEFNQLFI 120

Query: 371 XXXXGMALFGALLFFIGMKNSIPKRQ 448
                MAL+GALLFFIGMKNS P+RQ
Sbjct: 121 KFTQNMALYGALLFFIGMKNSFPRRQ 146


>gb|ABK92988.1| unknown [Populus trichocarpa]
          Length = 157

 Score =  179 bits (453), Expect = 1e-42
 Identities = 91/147 (61%), Positives = 104/147 (70%)
 Frame = +2

Query: 11  MGFFSFAGRVLFASVFILSAWQEFNDYGVDGGPAAKALRPKFDVLTGHVTSQLGLQVPDI 190
           M F SF GRVLFASVFILSAWQEFN++G +GGPAA  L PKF V + HV+SQ G QVP  
Sbjct: 1   MAFVSFVGRVLFASVFILSAWQEFNEFGTNGGPAAHLLEPKFHVFSKHVSSQTGFQVPHF 60

Query: 191 EIKQLVAAAIALKXXXXXXXXXXXXXXAYLLLLHQAIITPIVYDFYNYDLETKEXXXXXX 370
           E+K  VAAAI++K              AYLLLLHQ IITPI+YDFYNYD +TKE      
Sbjct: 61  EMKHAVAAAISVKAFGSLLFIFGSSVGAYLLLLHQIIITPILYDFYNYDADTKEFNLLFA 120

Query: 371 XXXXGMALFGALLFFIGMKNSIPKRQV 451
                +ALFGALLFFIGMKNSIP+RQ+
Sbjct: 121 KFAQNLALFGALLFFIGMKNSIPRRQL 147


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