BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013025
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632859.1| PREDICTED: pentatricopeptide repeat-containi...   209   5e-52
ref|XP_004141838.1| PREDICTED: pentatricopeptide repeat-containi...   170   5e-40
ref|NP_189412.1| uncharacterized protein [Arabidopsis thaliana] ...   162   1e-37
ref|XP_003533047.1| PREDICTED: uncharacterized protein LOC100788...   161   2e-37
ref|XP_002875401.1| hypothetical protein ARALYDRAFT_905030 [Arab...   160   4e-37

>ref|XP_003632859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like [Vitis vinifera]
           gi|297743240|emb|CBI36107.3| unnamed protein product
           [Vitis vinifera]
          Length = 230

 Score =  209 bits (533), Expect = 5e-52
 Identities = 107/175 (61%), Positives = 134/175 (76%), Gaps = 1/175 (0%)
 Frame = -1

Query: 782 YIPIRCGPRDNRGPLQKGRILSTEAMQAIQALKRA-KSDPTKLDSLISKTLTRLIKADLI 606
           Y PIRCGPRDNRGPL KGR+LS EA+QAIQ+LKRA + DPTK+D  +SKTL+RL+KADL+
Sbjct: 28  YTPIRCGPRDNRGPLMKGRVLSIEAIQAIQSLKRAHRGDPTKIDDFLSKTLSRLVKADLL 87

Query: 605 SSLNELLRQNHCDLALKVFSTVRTEYWYKTDCSLYADMVLGLSRNGMLEDIDRXXXXXXX 426
           ++LNELLRQ+ CDLAL+VFS VR+E WYKT+ SLYAD+V  L+R GM E+IDR       
Sbjct: 88  ATLNELLRQDQCDLALRVFSAVRSELWYKTELSLYADLVSALARKGMKEEIDRLICDLEG 147

Query: 425 XXXXESDCKDISRLIRALVAAERKESLVRIYGVLKNGGAGSMYEVDEYVVKVLSR 261
                 D K I RL++A++AAER++S VRIYG++K  G G     DEYV +VLSR
Sbjct: 148 EGSVRCDDKGIVRLVKAVIAAERRDSTVRIYGLMKRSGCGG---GDEYVGRVLSR 199


>ref|XP_004141838.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
           gi|449491766|ref|XP_004158997.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
          Length = 230

 Score =  170 bits (430), Expect = 5e-40
 Identities = 89/175 (50%), Positives = 125/175 (71%), Gaps = 4/175 (2%)
 Frame = -1

Query: 773 IRCGPRDNRGPLQKGRILSTEAMQAIQALKRA-KSDPTKLDSLISKTLTRLIKADLISSL 597
           +RCGPRDNRGPL KGR LS EA+QAIQ+LKRA +SDPTKL  ++S TL+RL+KADL+++L
Sbjct: 33  VRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATL 92

Query: 596 NELLRQNHCDLALKVFSTVRTEYWYKTDCSLYADMVLGLSRNGMLEDIDR---XXXXXXX 426
            ELLRQ  C LAL+VF+ +++E  Y+ +  LYA++   LSRNG  E+IDR          
Sbjct: 93  KELLRQERCALALEVFAVIKSE--YRAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDG 150

Query: 425 XXXXESDCKDISRLIRALVAAERKESLVRIYGVLKNGGAGSMYEVDEYVVKVLSR 261
                 D K + +LI+A+++  R+ES VRIY +++  G GSM + D+Y++KVLS+
Sbjct: 151 VIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMIKVLSK 205


>ref|NP_189412.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9294480|dbj|BAB02699.1| unnamed protein product
           [Arabidopsis thaliana] gi|49660179|gb|AAT68380.1|
           hypothetical protein At3g27750 [Arabidopsis thaliana]
           gi|60547779|gb|AAX23853.1| hypothetical protein
           At3g27750 [Arabidopsis thaliana]
           gi|332643839|gb|AEE77360.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 222

 Score =  162 bits (409), Expect = 1e-37
 Identities = 95/175 (54%), Positives = 123/175 (70%), Gaps = 1/175 (0%)
 Frame = -1

Query: 782 YIPIRCGPRDNRGPLQKGRILSTEAMQAIQALKRAKSDPTKLDSLISKTLTRLIKADLIS 603
           ++ IRCGPRDNRGPL KGRILSTEA+Q+IQ+LKRA      L SL  + L RLIK+DLIS
Sbjct: 28  FVSIRCGPRDNRGPLLKGRILSTEAIQSIQSLKRAHRTGVSL-SLTLRPLRRLIKSDLIS 86

Query: 602 SLNELLRQNHCDLALKVFSTVRTEYWYKTDCSLYADMVLGLSRNGMLEDIDRXXXXXXXX 423
            L ELLRQ++C LA+ V ST+RTEY    D  LYAD+V  L+RN   ++IDR        
Sbjct: 87  VLRELLRQDYCTLAVHVLSTLRTEY-PPLDLVLYADIVNALTRNKEFDEIDR-LIGEIDG 144

Query: 422 XXXESDCKDISRLIRALVAAERKESLVRIYGVLKNGGAGS-MYEVDEYVVKVLSR 261
               SD K +++LIRA+V AER+ES+VR+Y +++  G GS  +E DEYV +VLS+
Sbjct: 145 IDQRSDDKALAKLIRAVVGAERRESVVRVYTLMRESGWGSESWEADEYVAEVLSK 199


>ref|XP_003533047.1| PREDICTED: uncharacterized protein LOC100788379 [Glycine max]
          Length = 238

 Score =  161 bits (408), Expect = 2e-37
 Identities = 92/176 (52%), Positives = 122/176 (69%), Gaps = 4/176 (2%)
 Frame = -1

Query: 782 YIPIRCG-PRDNRGPLQKGRILSTEAMQAIQALKRA-KSDPTKLDSLISKTLTRLIKADL 609
           Y+ +RCG PR +R PL KGRILS EA+QAIQ LKR  +++P +L SL+S TLTRLIK+DL
Sbjct: 28  YVRVRCGGPRSHRTPLVKGRILSIEAIQAIQTLKRLHRTNPPELTSLVSNTLTRLIKSDL 87

Query: 608 ISSLNELLRQNHCDLALKVFSTVRTEYWYKTDCSLYADMVLGLSRNGMLEDIDR--XXXX 435
           +++L ELLRQ HC +AL+VFST+R+E  Y  D SLYA+M   L+ N M + +DR      
Sbjct: 88  LATLRELLRQQHCTIALRVFSTLRSE--YGADLSLYAEMAQTLAANDMTDHLDRLILDLA 145

Query: 434 XXXXXXXESDCKDISRLIRALVAAERKESLVRIYGVLKNGGAGSMYEVDEYVVKVL 267
                    D K ++ LI+A+VAA  +ES VRIYG++   G GS+ E DEYVV+VL
Sbjct: 146 SENEIKCGDDHKGLASLIKAVVAARSRESTVRIYGLMNKSGYGSVTEPDEYVVEVL 201


>ref|XP_002875401.1| hypothetical protein ARALYDRAFT_905030 [Arabidopsis lyrata subsp.
           lyrata] gi|297321239|gb|EFH51660.1| hypothetical protein
           ARALYDRAFT_905030 [Arabidopsis lyrata subsp. lyrata]
          Length = 220

 Score =  160 bits (405), Expect = 4e-37
 Identities = 94/174 (54%), Positives = 123/174 (70%), Gaps = 1/174 (0%)
 Frame = -1

Query: 779 IPIRCGPRDNRGPLQKGRILSTEAMQAIQALKRAKSDPTKLDSLISKTLTRLIKADLISS 600
           + IRCGPRDNRGPL KGRILSTEA+Q+IQ+LKRA    + + SL  + L RLIK+DL+S 
Sbjct: 27  VSIRCGPRDNRGPLLKGRILSTEAIQSIQSLKRAHRTGSSI-SLTLRPLRRLIKSDLVSV 85

Query: 599 LNELLRQNHCDLALKVFSTVRTEYWYKTDCSLYADMVLGLSRNGMLEDIDRXXXXXXXXX 420
           L ELLRQ++C LA+ V ST+R+EY    D  LYAD+V  LSRN   ++IDR         
Sbjct: 86  LRELLRQDYCTLAVHVLSTLRSEY-PPLDLVLYADIVNALSRNKEFDEIDR-LIGEIEII 143

Query: 419 XXESDCKDISRLIRALVAAERKESLVRIYGVLKNGGAGS-MYEVDEYVVKVLSR 261
              SD K +++LIRA+V AER+ES+VR+Y +L+  G GS  +E DEYV +VLS+
Sbjct: 144 DQRSDDKALAKLIRAVVGAERRESVVRVYTLLRESGWGSESWEADEYVAEVLSK 197