BLASTX nr result

ID: Coptis24_contig00013014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013014
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264064.1| PREDICTED: probable receptor-like protein ki...    74   2e-11
emb|CAN66614.1| hypothetical protein VITISV_023172 [Vitis vinifera]    73   2e-11
ref|XP_002263133.2| PREDICTED: probable serine/threonine-protein...    72   4e-11
ref|XP_002263649.2| PREDICTED: probable receptor-like protein ki...    72   5e-11
ref|XP_002268088.1| PREDICTED: probable receptor-like protein ki...    72   5e-11

>ref|XP_002264064.1| PREDICTED: probable receptor-like protein kinase At1g67000-like
           [Vitis vinifera]
          Length = 596

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/86 (40%), Positives = 51/86 (59%)
 Frame = +2

Query: 2   VYFPEWLYNKVEKDEFPFVTRREDNDVSFXXXXXXXXXXXXXXNIVKKMCLVGLWCVQHI 181
           VYFPEW+YN+++K E   +   ED D+                 I KK+ +VGLWC+Q  
Sbjct: 497 VYFPEWVYNQLDKGEEVCIRIEEDGDIK----------------IAKKLTIVGLWCIQWC 540

Query: 182 PSNRPSMDKVVQMLEGHVEIGIPPHP 259
           P +RPS+  V+QMLEG  ++ +PP+P
Sbjct: 541 PIDRPSIKVVIQMLEGGDKLTMPPNP 566


>emb|CAN66614.1| hypothetical protein VITISV_023172 [Vitis vinifera]
          Length = 544

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   VYFPEWLYNKVEKDEFPFVTRREDNDVSFXXXXXXXXXXXXXXNIVKKMCLVGLWCVQHI 181
           VYFPEW+YN+++K E   +   E+ND                  I KK+ +VGLWC+Q  
Sbjct: 449 VYFPEWVYNRLDKREELHIPIEEEND----------------GEIAKKLLIVGLWCIQWC 492

Query: 182 PSNRPSMDKVVQMLEGH-VEIGIPPHP 259
           P+NRPSM  ++QMLEG    + +PP+P
Sbjct: 493 PTNRPSMKFIIQMLEGEGNNLSMPPNP 519


>ref|XP_002263133.2| PREDICTED: probable serine/threonine-protein kinase At1g18390-like
           [Vitis vinifera]
          Length = 787

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/86 (40%), Positives = 49/86 (56%)
 Frame = +2

Query: 2   VYFPEWLYNKVEKDEFPFVTRREDNDVSFXXXXXXXXXXXXXXNIVKKMCLVGLWCVQHI 181
           VYFPEW+YN +++ E   +   E+ D                  IVKK+ ++GLWC+Q  
Sbjct: 689 VYFPEWIYNHLDQGEELQIRIDEEGDTQ----------------IVKKLTIIGLWCIQWF 732

Query: 182 PSNRPSMDKVVQMLEGHVEIGIPPHP 259
           P++RPSM  VVQMLEG   +  PP+P
Sbjct: 733 PTDRPSMKLVVQMLEGEHNLSTPPNP 758


>ref|XP_002263649.2| PREDICTED: probable receptor-like protein kinase At5g39020-like
           [Vitis vinifera]
          Length = 596

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/86 (39%), Positives = 51/86 (59%)
 Frame = +2

Query: 2   VYFPEWLYNKVEKDEFPFVTRREDNDVSFXXXXXXXXXXXXXXNIVKKMCLVGLWCVQHI 181
           VYFPEW+YN+++K E   +   E+ D+                 I KK+ +VGLWC+Q  
Sbjct: 497 VYFPEWVYNQLDKGEEVCIRIEEEGDIK----------------IAKKLTIVGLWCIQWC 540

Query: 182 PSNRPSMDKVVQMLEGHVEIGIPPHP 259
           P +RPS+  V+QMLEG  ++ +PP+P
Sbjct: 541 PIDRPSIKVVIQMLEGGDKLTMPPNP 566


>ref|XP_002268088.1| PREDICTED: probable receptor-like protein kinase At1g67000-like
           [Vitis vinifera]
          Length = 592

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/86 (41%), Positives = 49/86 (56%)
 Frame = +2

Query: 2   VYFPEWLYNKVEKDEFPFVTRREDNDVSFXXXXXXXXXXXXXXNIVKKMCLVGLWCVQHI 181
           VYFPEW+YN +++ E   +   ED D                  IVKK+ +VGLWC+Q  
Sbjct: 494 VYFPEWIYNHLDQGEELQIRIDEDGDTQ----------------IVKKLTIVGLWCIQWF 537

Query: 182 PSNRPSMDKVVQMLEGHVEIGIPPHP 259
            ++RPSM  VVQMLEG   + +PP+P
Sbjct: 538 SADRPSMKLVVQMLEGEHNLSMPPNP 563


Top