BLASTX nr result

ID: Coptis24_contig00013003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013003
         (1297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533350.1| conserved hypothetical protein [Ricinus comm...   323   8e-86
ref|XP_002309712.1| predicted protein [Populus trichocarpa] gi|2...   321   3e-85
ref|XP_002276129.1| PREDICTED: uncharacterized protein LOC100245...   319   9e-85
emb|CAN75809.1| hypothetical protein VITISV_004630 [Vitis vinifera]   318   2e-84
ref|XP_004138945.1| PREDICTED: uncharacterized protein LOC101210...   316   1e-83

>ref|XP_002533350.1| conserved hypothetical protein [Ricinus communis]
           gi|223526815|gb|EEF29035.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 351

 Score =  323 bits (827), Expect = 8e-86
 Identities = 159/311 (51%), Positives = 205/311 (65%), Gaps = 19/311 (6%)
 Frame = +2

Query: 83  CNLHKAPSLLLPKQTQTSNFTILSSNLRLKASNKEVEVVFDDGEKKKNEDGSEL------ 244
           C+ H +  + +P Q Q   F     N  ++AS         DG+KKK E+ S+       
Sbjct: 46  CSSHSSNFIRVPLQLQGGRFR----NSGVRASRTAETFKSGDGKKKKWEESSDSDEDDDS 101

Query: 245 -------------MNXXXXXXXXXXXXXVMDKNSQVNEQMDVNERKKIMEKLIAEYPLVV 385
                        M+             V+DK+  + E+++  ++K  M+KL+A+YPLVV
Sbjct: 102 FSTKKGEVNDPYQMDAAERREWRRNIREVIDKHPDIEEELNAEDKKIRMQKLLADYPLVV 161

Query: 386 NEEDPSWPEDADGWGFNLGQFFDKISIKNVKKDDDNDEGYDSDKELVWQDDDYIRPIKEI 565
            E+DP WPED+DGWGFNLGQFF+KI+IKN KKDDD DE YDS+ E+VWQDD+YIRPIK+I
Sbjct: 162 EEDDPDWPEDSDGWGFNLGQFFNKITIKNKKKDDD-DENYDSENEIVWQDDNYIRPIKDI 220

Query: 566 STKEWEETVFKDISPLVVFVHNRYRRPKENEMVREELEKVAHIFWNCGLPSPRCXXXXXX 745
           +T +WEETVFKDI+PL++ VHNRY+RPKENE  R+ELEK  +I WNC LPSPRC      
Sbjct: 221 TTADWEETVFKDINPLIILVHNRYKRPKENEKARDELEKAVNIIWNCRLPSPRCVAVDAV 280

Query: 746 XXXXXXXXXKVSVFPEVLFAKAGRILYREKVFRSADELSKIMGFFYYGAAKPPCLYTVGT 925
                    KVS+FPE++F KAG+ILYRE+  R+ADE SKIM +FYYGA KPPCL  +G 
Sbjct: 281 VETDLVSALKVSIFPEIIFTKAGKILYRERATRTADEFSKIMAYFYYGAGKPPCLSGIGE 340

Query: 926 SQEMIPSVPIN 958
           SQE+IPSVPIN
Sbjct: 341 SQELIPSVPIN 351


>ref|XP_002309712.1| predicted protein [Populus trichocarpa] gi|222852615|gb|EEE90162.1|
           predicted protein [Populus trichocarpa]
          Length = 355

 Score =  321 bits (822), Expect = 3e-85
 Identities = 166/324 (51%), Positives = 206/324 (63%), Gaps = 21/324 (6%)
 Frame = +2

Query: 53  PVRFQYFKQNCNLHKAPSLLLPKQTQTSNFTILSSNLRLKASNKEVEVVFDDGEKKKNED 232
           P  +      C+   +  L  P Q     F    S    +AS ++  V+ DDG+KK+ E+
Sbjct: 34  PTTYTEVSSTCSCLSSKFLNYPSQVHGGGFQSSIS----RASRRDERVLSDDGKKKRREE 89

Query: 233 GSE-------------------LMNXXXXXXXXXXXXXVMDKNSQVNE--QMDVNERKKI 349
            SE                   LM+             VM K+  V+E  ++D  E++  
Sbjct: 90  FSESDDDDDDYSSIKGKVNDPYLMDAEERREWRMKIREVMKKHPDVDEDEELDSEEKRMR 149

Query: 350 MEKLIAEYPLVVNEEDPSWPEDADGWGFNLGQFFDKISIKNVKKDDDNDEGYDSDKELVW 529
           MEKL+A+YPL+V+E+DP WPEDADG GF L QFF+KI+IKN KKDDD DE YDSDKE+VW
Sbjct: 150 MEKLLADYPLIVDEDDPDWPEDADGRGFGLDQFFNKITIKNKKKDDD-DENYDSDKEIVW 208

Query: 530 QDDDYIRPIKEISTKEWEETVFKDISPLVVFVHNRYRRPKENEMVREELEKVAHIFWNCG 709
           QDDDYIRPIK+I+T  WEE VFKDISPL+V VHNRY+RPKENE +R+ LEK  HI WNC 
Sbjct: 209 QDDDYIRPIKDITTAGWEEAVFKDISPLIVLVHNRYKRPKENENIRDALEKAVHIIWNCR 268

Query: 710 LPSPRCXXXXXXXXXXXXXXXKVSVFPEVLFAKAGRILYREKVFRSADELSKIMGFFYYG 889
           LPSPRC               KVSVFPE++F KAG+ILYREK  R+ADE SKIM +FYYG
Sbjct: 269 LPSPRCVAIDAVVETDLVSALKVSVFPEIIFTKAGKILYREKAIRTADEFSKIMAYFYYG 328

Query: 890 AAKPPCLYTVGTSQEMIPSVPINS 961
           A KPPCL  +G SQE+IPSV ++S
Sbjct: 329 AGKPPCLNDIGDSQELIPSVHVSS 352


>ref|XP_002276129.1| PREDICTED: uncharacterized protein LOC100245762 [Vitis vinifera]
           gi|296084374|emb|CBI24762.3| unnamed protein product
           [Vitis vinifera]
          Length = 328

 Score =  319 bits (818), Expect = 9e-85
 Identities = 156/272 (57%), Positives = 194/272 (71%), Gaps = 7/272 (2%)
 Frame = +2

Query: 167 LKASNKEVEVVFDDGEKKKNEDGSE-------LMNXXXXXXXXXXXXXVMDKNSQVNEQM 325
           L+AS    ++  +DG++  ++  SE       +M+             V+D N  V E+M
Sbjct: 57  LRASTTPHKLKSNDGDQDSSDSDSEGENDDAPIMSDEERREWRSKIRQVIDGNPDVEEEM 116

Query: 326 DVNERKKIMEKLIAEYPLVVNEEDPSWPEDADGWGFNLGQFFDKISIKNVKKDDDNDEGY 505
           D   ++++M+KL+A+YPLVV E+DP+WPEDADG GFNL QFFDKI+IKNVKKD  +D+ Y
Sbjct: 117 DPVLKRRMMQKLLADYPLVVEEDDPNWPEDADGRGFNLDQFFDKITIKNVKKDKGDDDNY 176

Query: 506 DSDKELVWQDDDYIRPIKEISTKEWEETVFKDISPLVVFVHNRYRRPKENEMVREELEKV 685
           DS+ E+VWQDD+YIRPIK+I T EWEETV KDISPL+V VHNRY+RPKEN+ +REELEK 
Sbjct: 177 DSEDEIVWQDDNYIRPIKDIKTAEWEETVLKDISPLIVLVHNRYKRPKENQKIREELEKA 236

Query: 686 AHIFWNCGLPSPRCXXXXXXXXXXXXXXXKVSVFPEVLFAKAGRILYREKVFRSADELSK 865
            HI WNC LPSPRC               +VSVFPEV+F KAG+IL+REKV ++ADELSK
Sbjct: 237 VHIIWNCRLPSPRCVAIDAVVEVDLVSALQVSVFPEVIFTKAGKILHREKVIQTADELSK 296

Query: 866 IMGFFYYGAAKPPCLYTVGTSQEMIPSVPINS 961
           IM FFYYGAAKPPCL   G SQE IP VPI S
Sbjct: 297 IMAFFYYGAAKPPCLNGTGDSQEAIPLVPIKS 328


>emb|CAN75809.1| hypothetical protein VITISV_004630 [Vitis vinifera]
          Length = 324

 Score =  318 bits (815), Expect = 2e-84
 Identities = 151/252 (59%), Positives = 184/252 (73%)
 Frame = +2

Query: 206 DGEKKKNEDGSELMNXXXXXXXXXXXXXVMDKNSQVNEQMDVNERKKIMEKLIAEYPLVV 385
           D + +   D + +M+             V+D N  V E+MD   ++++M+KL+A+YPLVV
Sbjct: 73  DSDSEGENDDAPIMSDEERREWRSKIRQVIDGNPDVEEEMDPVLKRRMMQKLLADYPLVV 132

Query: 386 NEEDPSWPEDADGWGFNLGQFFDKISIKNVKKDDDNDEGYDSDKELVWQDDDYIRPIKEI 565
            E+DP+WPEDADG GFNL QFFDKI+IKNVKKD  +D+ YDS+ E+VWQDD+YIRPIK+I
Sbjct: 133 EEDDPNWPEDADGRGFNLDQFFDKITIKNVKKDKGDDDNYDSEDEIVWQDDNYIRPIKDI 192

Query: 566 STKEWEETVFKDISPLVVFVHNRYRRPKENEMVREELEKVAHIFWNCGLPSPRCXXXXXX 745
            T EWEETV KDISPL+V VHNRY+RPKEN+ +REELEK  HI WNC LPSPRC      
Sbjct: 193 KTAEWEETVLKDISPLIVLVHNRYKRPKENQKIREELEKAVHIIWNCRLPSPRCVAIDAV 252

Query: 746 XXXXXXXXXKVSVFPEVLFAKAGRILYREKVFRSADELSKIMGFFYYGAAKPPCLYTVGT 925
                    +VSVFPEV+F KAG+IL+REKV ++ADELSKIM FFYYGAAKPPCL   G 
Sbjct: 253 VEVDLVSALQVSVFPEVIFTKAGKILHREKVIQTADELSKIMAFFYYGAAKPPCLNGTGD 312

Query: 926 SQEMIPSVPINS 961
           SQE IP VPI S
Sbjct: 313 SQEAIPLVPIKS 324


>ref|XP_004138945.1| PREDICTED: uncharacterized protein LOC101210591 [Cucumis sativus]
          Length = 347

 Score =  316 bits (809), Expect = 1e-83
 Identities = 156/250 (62%), Positives = 180/250 (72%), Gaps = 1/250 (0%)
 Frame = +2

Query: 203 DDGEKKKNEDGSELMNXXXXXXXXXXXXXVMDKNSQVNEQMDVNERKKIMEKLIAEYPLV 382
           DD    K  D  ELM+             V+D N  V E++D  ER+  M+KL+A+YPLV
Sbjct: 97  DDSSSAKEPD-VELMDAEERREWREKIRKVIDTNPNVEEEIDNMERRIKMQKLLADYPLV 155

Query: 383 VNEEDPSWPEDADGWGFNLGQFFDKISIKNVKKDDD-NDEGYDSDKELVWQDDDYIRPIK 559
           V EEDP WPEDADGWGFNLGQFFDKI+IKN KKDD  +D+  D+D E+VWQDD+YIRPIK
Sbjct: 156 VEEEDPDWPEDADGWGFNLGQFFDKITIKNKKKDDKYDDDKDDTDNEVVWQDDNYIRPIK 215

Query: 560 EISTKEWEETVFKDISPLVVFVHNRYRRPKENEMVREELEKVAHIFWNCGLPSPRCXXXX 739
           +I+  EWEE VFKDISPL++FVHNRY+RPKENE VREELEK  HI WNC LPSPRC    
Sbjct: 216 DITISEWEEAVFKDISPLIIFVHNRYKRPKENEKVREELEKAIHIIWNCNLPSPRCVAVD 275

Query: 740 XXXXXXXXXXXKVSVFPEVLFAKAGRILYREKVFRSADELSKIMGFFYYGAAKPPCLYTV 919
                      +VS FPE++F KAG+ILYREK F +ADELSKIM FFYYGAAKPPCL  V
Sbjct: 276 AVVECNLVTALQVSAFPEIIFTKAGKILYREKGFVNADELSKIMAFFYYGAAKPPCLNDV 335

Query: 920 GTSQEMIPSV 949
           G  QE IPSV
Sbjct: 336 GDYQEAIPSV 345


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