BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012490
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34306.1| Polyprotein, putative [Solanum demissum]                94   9e-18
gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]    94   1e-17
gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|16...    94   1e-17
ref|XP_002489303.1| hypothetical protein SORBIDRAFT_0010s005460 ...    89   4e-16
gb|ABA99836.1| retrotransposon protein, putative, Ty1-copia subc...    89   5e-16

>gb|ABI34306.1| Polyprotein, putative [Solanum demissum]
          Length = 1691

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 48/70 (68%), Positives = 58/70 (82%)
 Frame = -3

Query: 211  FKISERDKCIYYKYSDGIYVLYIICLYVDDLLFFKSNLHVVKETKNLLSSNFDMKDLGEA 32
            FK +E DKCIY+K  +  +V  IICLYVDDLL F SN++V+ ETKN+L S+FDMKDLGEA
Sbjct: 956  FKTNECDKCIYHKSWNNSHV--IICLYVDDLLIFGSNINVIDETKNILRSHFDMKDLGEA 1013

Query: 31   DVILGIKITR 2
            +VILGIKITR
Sbjct: 1014 NVILGIKITR 1023


>gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]
          Length = 1292

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 44/70 (62%), Positives = 56/70 (80%)
 Frame = -3

Query: 211  FKISERDKCIYYKYSDGIYVLYIICLYVDDLLFFKSNLHVVKETKNLLSSNFDMKDLGEA 32
            F ++E D C+YY+Y  G  V+  +CLYVDD+L F SNL+V++E KNLLSSNF+MKDLGEA
Sbjct: 979  FVVNESDTCVYYRYGGGESVM--LCLYVDDILIFGSNLNVIEEVKNLLSSNFEMKDLGEA 1036

Query: 31   DVILGIKITR 2
            DVIL IK+ R
Sbjct: 1037 DVILNIKLVR 1046


>gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|168251067|gb|ACA21850.1| Fourf
            gag/pol protein [Zea mays]
          Length = 1279

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 44/70 (62%), Positives = 56/70 (80%)
 Frame = -3

Query: 211  FKISERDKCIYYKYSDGIYVLYIICLYVDDLLFFKSNLHVVKETKNLLSSNFDMKDLGEA 32
            F ++E D C+YY+Y  G  V+  +CLYVDD+L F SNL+V++E KNLLSSNF+MKDLGEA
Sbjct: 939  FVVNESDTCVYYRYGGGESVM--LCLYVDDILIFGSNLNVIEEVKNLLSSNFEMKDLGEA 996

Query: 31   DVILGIKITR 2
            DVIL IK+ R
Sbjct: 997  DVILNIKLVR 1006


>ref|XP_002489303.1| hypothetical protein SORBIDRAFT_0010s005460 [Sorghum bicolor]
           gi|241946951|gb|EES20096.1| hypothetical protein
           SORBIDRAFT_0010s005460 [Sorghum bicolor]
          Length = 699

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 41/70 (58%), Positives = 55/70 (78%)
 Frame = -3

Query: 211 FKISERDKCIYYKYSDGIYVLYIICLYVDDLLFFKSNLHVVKETKNLLSSNFDMKDLGEA 32
           F ++E DKC+YY++  G  V  I+CLYVDD+L F +NL V+KE K  LS+NF+MKDLGEA
Sbjct: 358 FAVNEADKCVYYRFGGGDGV--ILCLYVDDILIFGNNLKVIKEVKEFLSNNFEMKDLGEA 415

Query: 31  DVILGIKITR 2
           DVI+ IK++R
Sbjct: 416 DVIVNIKLSR 425


>gb|ABA99836.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1302

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/70 (60%), Positives = 53/70 (75%)
 Frame = -3

Query: 211  FKISERDKCIYYKYSDGIYVLYIICLYVDDLLFFKSNLHVVKETKNLLSSNFDMKDLGEA 32
            F ++E DKC+YY++  G  V  I+CLYVDD+L FK+NL V+ E K+ LS NFDMKDLG A
Sbjct: 963  FAVNEADKCVYYRHGRGEGV--ILCLYVDDILIFKTNLEVINEVKSFLSQNFDMKDLGVA 1020

Query: 31   DVILGIKITR 2
            DVIL IK+ R
Sbjct: 1021 DVILNIKLIR 1030