BLASTX nr result
ID: Coptis24_contig00012489
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00012489 (847 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004145491.1| PREDICTED: ER membrane protein complex subun... 275 7e-72 ref|XP_004164576.1| PREDICTED: ER membrane protein complex subun... 274 2e-71 ref|XP_002515399.1| conserved hypothetical protein [Ricinus comm... 272 6e-71 ref|XP_002285573.1| PREDICTED: transmembrane protein 85 [Vitis v... 271 2e-70 ref|XP_002309687.1| predicted protein [Populus trichocarpa] gi|2... 268 1e-69 >ref|XP_004145491.1| PREDICTED: ER membrane protein complex subunit 4-like [Cucumis sativus] Length = 180 Score = 275 bits (704), Expect = 7e-72 Identities = 134/173 (77%), Positives = 151/173 (87%), Gaps = 3/173 (1%) Frame = +3 Query: 15 MEKGKGVML--RRWAVELTDTSSL-SIKDIPDPPGYTKASQDQDDSTVSRQKKDAEAAWK 185 MEKGKG+M+ RRWAV+ +D SS S +DIPDPPG+T+ASQDQDDST+SRQKKDAE+ WK Sbjct: 1 MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60 Query: 186 SQKAWEVAQAPVKNLFMMGFMMWMAGNTVHLFSIGITFSALWQPLSALQGLGKVFEPYKD 365 +QKAWEVAQAP+KNLFMMGFMMWMAG+TVHLFSIGITFSALWQP+SALQG+GKVFEPYKD Sbjct: 61 AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120 Query: 366 PKVDTLAPKLVFXXXXXXXXXXGVWKLNSLGLLPTHASDWVSSLPPAREVEFS 524 KVD L PKL+F GVWKLN+LGLLPTH SDWVSSLPPA+EVEFS Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFS 173 >ref|XP_004164576.1| PREDICTED: ER membrane protein complex subunit 4-like [Cucumis sativus] Length = 180 Score = 274 bits (701), Expect = 2e-71 Identities = 133/173 (76%), Positives = 151/173 (87%), Gaps = 3/173 (1%) Frame = +3 Query: 15 MEKGKGVML--RRWAVELTDTSSL-SIKDIPDPPGYTKASQDQDDSTVSRQKKDAEAAWK 185 MEKGKG+M+ RRWAV+ +D SS S +DIPDPPG+T+ASQDQDDST+SRQKKDAE+ WK Sbjct: 1 MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60 Query: 186 SQKAWEVAQAPVKNLFMMGFMMWMAGNTVHLFSIGITFSALWQPLSALQGLGKVFEPYKD 365 +QKAWEVAQAP+KNLFMMGFMMWMAG+TVHLFSIGITFSALWQP+SALQG+GKVFEPY+D Sbjct: 61 AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYRD 120 Query: 366 PKVDTLAPKLVFXXXXXXXXXXGVWKLNSLGLLPTHASDWVSSLPPAREVEFS 524 KVD L PKL+F GVWKLN+LGLLPTH SDWVSSLPPA+EVEFS Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFS 173 >ref|XP_002515399.1| conserved hypothetical protein [Ricinus communis] gi|223545343|gb|EEF46848.1| conserved hypothetical protein [Ricinus communis] Length = 180 Score = 272 bits (696), Expect = 6e-71 Identities = 132/173 (76%), Positives = 149/173 (86%), Gaps = 3/173 (1%) Frame = +3 Query: 15 MEKGKGVML--RRWAVELTDTSSL-SIKDIPDPPGYTKASQDQDDSTVSRQKKDAEAAWK 185 MEKGKGVM RRWA++ TD S+L S +D+PDPPG+++ASQDQDDSTV++QKKDAEA WK Sbjct: 1 MEKGKGVMGSGRRWAIDFTDNSNLPSSRDVPDPPGFSRASQDQDDSTVTKQKKDAEANWK 60 Query: 186 SQKAWEVAQAPVKNLFMMGFMMWMAGNTVHLFSIGITFSALWQPLSALQGLGKVFEPYKD 365 +QKAWEVAQAP KNL MMGFMMWMAGNTVHLFSIGITFSALWQP+SALQG+GKVFEPYKD Sbjct: 61 AQKAWEVAQAPFKNLMMMGFMMWMAGNTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120 Query: 366 PKVDTLAPKLVFXXXXXXXXXXGVWKLNSLGLLPTHASDWVSSLPPAREVEFS 524 +VD PKL+F G+WKLNSLGLLPTHASDWVSSLPPA+EVEFS Sbjct: 121 SRVDLNGPKLLFIALNLGGLALGIWKLNSLGLLPTHASDWVSSLPPAQEVEFS 173 >ref|XP_002285573.1| PREDICTED: transmembrane protein 85 [Vitis vinifera] gi|147864285|emb|CAN83012.1| hypothetical protein VITISV_010104 [Vitis vinifera] gi|296082155|emb|CBI21160.3| unnamed protein product [Vitis vinifera] Length = 179 Score = 271 bits (692), Expect = 2e-70 Identities = 134/172 (77%), Positives = 149/172 (86%), Gaps = 2/172 (1%) Frame = +3 Query: 15 MEKGKGVML-RRWAVELTDTSSL-SIKDIPDPPGYTKASQDQDDSTVSRQKKDAEAAWKS 188 MEKGKGVM RRWAV+LTD S+ S +DIPDPPG+++AS DQDDST+SRQKKDAEA WK+ Sbjct: 1 MEKGKGVMGGRRWAVDLTDYSTTPSSRDIPDPPGFSRASLDQDDSTLSRQKKDAEANWKA 60 Query: 189 QKAWEVAQAPVKNLFMMGFMMWMAGNTVHLFSIGITFSALWQPLSALQGLGKVFEPYKDP 368 QKAWEVAQAP KNL MMGFMMWMAG+TVHLFSIGITFSALWQP+SALQG+GKVFEPYKD Sbjct: 61 QKAWEVAQAPFKNLLMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDS 120 Query: 369 KVDTLAPKLVFXXXXXXXXXXGVWKLNSLGLLPTHASDWVSSLPPAREVEFS 524 KVD L PKL+F GVWKLN+LGLLPTHASDWVSSLPPA+EVE+S Sbjct: 121 KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPAQEVEYS 172 >ref|XP_002309687.1| predicted protein [Populus trichocarpa] gi|222855663|gb|EEE93210.1| predicted protein [Populus trichocarpa] Length = 180 Score = 268 bits (684), Expect = 1e-69 Identities = 130/173 (75%), Positives = 147/173 (84%), Gaps = 3/173 (1%) Frame = +3 Query: 15 MEKGKGVML--RRWAVELTDTSSL-SIKDIPDPPGYTKASQDQDDSTVSRQKKDAEAAWK 185 M+KGK VM RRWAV+ TD S+L S +DIPDPPG+++ASQDQ+DS V++QKKDAEA WK Sbjct: 1 MDKGKAVMGSGRRWAVDFTDNSTLPSSRDIPDPPGFSRASQDQEDSAVTKQKKDAEANWK 60 Query: 186 SQKAWEVAQAPVKNLFMMGFMMWMAGNTVHLFSIGITFSALWQPLSALQGLGKVFEPYKD 365 +QKAWEVAQAP KNL MMGFMMWMAGNTVHLFSIGITFSALWQP+ ALQG+GKVFEPYKD Sbjct: 61 AQKAWEVAQAPFKNLLMMGFMMWMAGNTVHLFSIGITFSALWQPIGALQGVGKVFEPYKD 120 Query: 366 PKVDTLAPKLVFXXXXXXXXXXGVWKLNSLGLLPTHASDWVSSLPPAREVEFS 524 KVD L PKLVF G+WKLN+LGLLPTHASDWVSSLPPA+EVE+S Sbjct: 121 SKVDLLVPKLVFIALNLGGLALGIWKLNTLGLLPTHASDWVSSLPPAKEVEYS 173