BLASTX nr result

ID: Coptis24_contig00012483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012483
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27907.3| unnamed protein product [Vitis vinifera]               80   2e-13

>emb|CBI27907.3| unnamed protein product [Vitis vinifera]
          Length = 1046

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 49/132 (37%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
 Frame = -1

Query: 399 RGSAGNTISPLPATFSAAPIEEGIPGLADDEKLLQNSTPSASPLFDGPILHSPSSSPPQK 220
           +GS G  ISP P+TF      EG PG+    K L+++ PS S   +GP LH P   PP K
Sbjct: 46  QGSTGYNISPTPSTFPPISSIEGRPGVVHRGKSLRSNAPSPSLQINGPALHPPLVLPPIK 105

Query: 219 LAPVPQTIEXXXXXXXXXXXXXXXSNKSAPMAQTVPELIPPTPQSVSQKTAPDIQIPVTA 40
            AP P+  +                +   P    VP  +P  P S SQ+ APD + PV A
Sbjct: 106 SAPAPEMTKGYVPSMPPSNPRMSPPHYKTPPHLKVPITLPSVPPSASQRKAPDNKAPVWA 165

Query: 39  PHA-LVPVASPP 7
           P A + PVA  P
Sbjct: 166 PVAPIAPVAPVP 177


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