BLASTX nr result
ID: Coptis24_contig00012479
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00012479
(1421 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276751.1| PREDICTED: eukaryotic translation initiation... 176 8e-94
ref|XP_002275312.1| PREDICTED: eukaryotic translation initiation... 174 3e-93
gb|AFK40013.1| unknown [Lotus japonicus] 172 4e-92
ref|XP_003538479.1| PREDICTED: eukaryotic translation initiation... 171 7e-92
ref|XP_004139813.1| PREDICTED: eukaryotic translation initiation... 171 2e-91
>ref|XP_002276751.1| PREDICTED: eukaryotic translation initiation factor 2 subunit alpha
[Vitis vinifera]
Length = 344
Score = 176 bits (445), Expect(3) = 8e-94
Identities = 78/98 (79%), Positives = 94/98 (95%)
Frame = +3
Query: 3 SEEDIAVCEERYNKSKLVHSILRHVAETLSIDLEDLYINIGWPLYRKYGHAYEAFRLIVN 182
SEEDI CEERYNKSKLVHSI+RHVAET+ +DLEDLYI++GWPLYRKYGHA+EAF++IV
Sbjct: 95 SEEDIQACEERYNKSKLVHSIMRHVAETMQLDLEDLYIHVGWPLYRKYGHAFEAFKIIVT 154
Query: 183 DPDSILNSLTRDIKEVGPDGKEVTKLVPAVSDEIKDAL 296
DPDS+LNSLTR++KEVGPDG+EVTK+VPA+S+E+KDAL
Sbjct: 155 DPDSVLNSLTREVKEVGPDGQEVTKVVPAISEEVKDAL 192
Score = 132 bits (332), Expect(3) = 8e-94
Identities = 64/75 (85%), Positives = 70/75 (93%)
Frame = +1
Query: 349 DEIKDALLINIRRRMTLQPLKIQADIEMKCFQMDGVLHIKAAMRKAEAAGNEDCPVKMKL 528
+E+KDAL+ NIRRRMT QPLKI+ADIEMKCFQ DGVLHIK AMRKAEAAGN+DCPVK+KL
Sbjct: 186 EEVKDALVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAAGNKDCPVKIKL 245
Query: 529 VAPPLYALTTQTLDK 573
VAPPLY LTTQTLDK
Sbjct: 246 VAPPLYVLTTQTLDK 260
Score = 85.5 bits (210), Expect(3) = 8e-94
Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 8/85 (9%)
Frame = +2
Query: 641 TTQTLDKEQGILTLNNAIEACSAEIELHKGKVVVKEAPRAVSERDDQKFAKPV------- 799
TTQTLDKEQG+ LNNAI AC+ EI+ HKGK++VKEAPRAVSERDD+ A+ +
Sbjct: 254 TTQTLDKEQGMSILNNAIAACTEEIDCHKGKLIVKEAPRAVSERDDKLLAEHMAKLSHQN 313
Query: 800 -DXXXXXXXXXXXDTGMGEIDFENA 871
+ DTG+G+ID EN+
Sbjct: 314 EEISGDEGSEEEEDTGLGDIDVENS 338
>ref|XP_002275312.1| PREDICTED: eukaryotic translation initiation factor 2 subunit alpha
[Vitis vinifera] gi|297745848|emb|CBI15904.3| unnamed
protein product [Vitis vinifera]
Length = 344
Score = 174 bits (440), Expect(3) = 3e-93
Identities = 77/98 (78%), Positives = 95/98 (96%)
Frame = +3
Query: 3 SEEDIAVCEERYNKSKLVHSILRHVAETLSIDLEDLYINIGWPLYRKYGHAYEAFRLIVN 182
SEEDI VCEERYNKSKLVHSI+RHVAET+++DLEDLYI++GWPLYRKY HA+EAF+LIV
Sbjct: 95 SEEDIQVCEERYNKSKLVHSIMRHVAETMNLDLEDLYIHVGWPLYRKYAHAFEAFKLIVT 154
Query: 183 DPDSILNSLTRDIKEVGPDGKEVTKLVPAVSDEIKDAL 296
DPDS+LNSLTR+IKE+GPDG+EVTK++PA+S+E+KD+L
Sbjct: 155 DPDSVLNSLTREIKEIGPDGQEVTKVIPAMSEEVKDSL 192
Score = 131 bits (330), Expect(3) = 3e-93
Identities = 63/75 (84%), Positives = 70/75 (93%)
Frame = +1
Query: 349 DEIKDALLINIRRRMTLQPLKIQADIEMKCFQMDGVLHIKAAMRKAEAAGNEDCPVKMKL 528
+E+KD+L+ NIRRRMT QPLKI+ADIEMKCFQ DGVLHIK AMRKAEAAGN+DCPVK+KL
Sbjct: 186 EEVKDSLIKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAAGNKDCPVKIKL 245
Query: 529 VAPPLYALTTQTLDK 573
VAPPLY LTTQTLDK
Sbjct: 246 VAPPLYVLTTQTLDK 260
Score = 86.3 bits (212), Expect(3) = 3e-93
Identities = 46/85 (54%), Positives = 57/85 (67%), Gaps = 8/85 (9%)
Frame = +2
Query: 641 TTQTLDKEQGILTLNNAIEACSAEIELHKGKVVVKEAPRAVSERDDQKFAKPV------- 799
TTQTLDKEQG+L LNNAI AC+ EIE HKGK++VKEAPRAVSERDD+ A+ +
Sbjct: 254 TTQTLDKEQGMLILNNAITACTKEIEQHKGKLIVKEAPRAVSERDDKLLAEHMAKLRQDN 313
Query: 800 -DXXXXXXXXXXXDTGMGEIDFENA 871
+ DTGMG+ D E++
Sbjct: 314 EEVSGDEGEEEEEDTGMGDADLESS 338
>gb|AFK40013.1| unknown [Lotus japonicus]
Length = 340
Score = 172 bits (437), Expect(3) = 4e-92
Identities = 77/98 (78%), Positives = 94/98 (95%)
Frame = +3
Query: 3 SEEDIAVCEERYNKSKLVHSILRHVAETLSIDLEDLYINIGWPLYRKYGHAYEAFRLIVN 182
SEEDI CEERYNKSKLVHSI+RHVAETL+IDLE+LY++IGWPLYRKYGHA+EAF+++V
Sbjct: 92 SEEDIQTCEERYNKSKLVHSIMRHVAETLNIDLEELYVHIGWPLYRKYGHAFEAFKIVVT 151
Query: 183 DPDSILNSLTRDIKEVGPDGKEVTKLVPAVSDEIKDAL 296
DPDS+LN LTR++KEVGPDG+EVTK+VPAVS+E+KD+L
Sbjct: 152 DPDSVLNLLTREVKEVGPDGQEVTKVVPAVSEEVKDSL 189
Score = 129 bits (325), Expect(3) = 4e-92
Identities = 62/75 (82%), Positives = 69/75 (92%)
Frame = +1
Query: 349 DEIKDALLINIRRRMTLQPLKIQADIEMKCFQMDGVLHIKAAMRKAEAAGNEDCPVKMKL 528
+E+KD+L+ NIRRRMT QPLKI+ADIEMKCFQ DGVLHIK AMRKAEAAGN+DCPV +KL
Sbjct: 183 EEVKDSLVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAAGNDDCPVNIKL 242
Query: 529 VAPPLYALTTQTLDK 573
VAPPLY LTTQTLDK
Sbjct: 243 VAPPLYVLTTQTLDK 257
Score = 85.5 bits (210), Expect(3) = 4e-92
Identities = 46/87 (52%), Positives = 57/87 (65%), Gaps = 8/87 (9%)
Frame = +2
Query: 641 TTQTLDKEQGILTLNNAIEACSAEIELHKGKVVVKEAPRAVSERDDQKFAKPV------- 799
TTQTLDKEQGIL LNNAI +C+ IE HKGK+VVKEA RAVSERDD+ A+ +
Sbjct: 251 TTQTLDKEQGILVLNNAIVSCTESIEKHKGKLVVKEAARAVSERDDKVIAEYMAKLRQEN 310
Query: 800 -DXXXXXXXXXXXDTGMGEIDFENAAI 877
+ DTGMGE+D +N ++
Sbjct: 311 EEVSGDEDSEEEEDTGMGEVDVDNGSV 337
>ref|XP_003538479.1| PREDICTED: eukaryotic translation initiation factor 2 subunit
alpha-like [Glycine max]
Length = 340
Score = 171 bits (434), Expect(3) = 7e-92
Identities = 77/98 (78%), Positives = 95/98 (96%)
Frame = +3
Query: 3 SEEDIAVCEERYNKSKLVHSILRHVAETLSIDLEDLYINIGWPLYRKYGHAYEAFRLIVN 182
SEEDI CEERYNKSKLVHSI+RHVAETL+IDLE+LYI+IGWPLYRKYGHA+EAF++IV
Sbjct: 92 SEEDIQACEERYNKSKLVHSIMRHVAETLNIDLEELYIHIGWPLYRKYGHAFEAFKIIVT 151
Query: 183 DPDSILNSLTRDIKEVGPDGKEVTKLVPAVSDEIKDAL 296
DPD++L++LTR++KEVGPDG+EVTK+VPAVS+E+KD+L
Sbjct: 152 DPDTVLSTLTREVKEVGPDGQEVTKVVPAVSEEVKDSL 189
Score = 129 bits (325), Expect(3) = 7e-92
Identities = 62/75 (82%), Positives = 69/75 (92%)
Frame = +1
Query: 349 DEIKDALLINIRRRMTLQPLKIQADIEMKCFQMDGVLHIKAAMRKAEAAGNEDCPVKMKL 528
+E+KD+L+ NIRRRMT QPLKI+ADIEMKCFQ DGVLHIK AM KAEAAGN+DCPVK+KL
Sbjct: 183 EEVKDSLVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMHKAEAAGNDDCPVKIKL 242
Query: 529 VAPPLYALTTQTLDK 573
VAPPLY LTTQTLDK
Sbjct: 243 VAPPLYVLTTQTLDK 257
Score = 85.9 bits (211), Expect(3) = 7e-92
Identities = 47/86 (54%), Positives = 56/86 (65%), Gaps = 8/86 (9%)
Frame = +2
Query: 641 TTQTLDKEQGILTLNNAIEACSAEIELHKGKVVVKEAPRAVSERDDQKFAKPV------- 799
TTQTLDKEQGIL LNNAI +C+ IE HKGK+VVKEA RAVSERDD+ A+ +
Sbjct: 251 TTQTLDKEQGILVLNNAIASCTEAIEQHKGKLVVKEAARAVSERDDKLLAEHMAKLRQDN 310
Query: 800 -DXXXXXXXXXXXDTGMGEIDFENAA 874
+ DTGMGE+D +N A
Sbjct: 311 EEVSGDEDSEEEEDTGMGEVDVDNGA 336
>ref|XP_004139813.1| PREDICTED: eukaryotic translation initiation factor 2 subunit
alpha-like [Cucumis sativus]
gi|449492599|ref|XP_004159044.1| PREDICTED: eukaryotic
translation initiation factor 2 subunit alpha-like
[Cucumis sativus]
Length = 344
Score = 171 bits (434), Expect(3) = 2e-91
Identities = 76/98 (77%), Positives = 93/98 (94%)
Frame = +3
Query: 3 SEEDIAVCEERYNKSKLVHSILRHVAETLSIDLEDLYINIGWPLYRKYGHAYEAFRLIVN 182
SEEDI CEERYNKSKLVHSI+RHVAET++IDLEDLYI++GWPLYRKYGHA+EAF++IV
Sbjct: 95 SEEDIQACEERYNKSKLVHSIMRHVAETMNIDLEDLYIHVGWPLYRKYGHAFEAFKIIVT 154
Query: 183 DPDSILNSLTRDIKEVGPDGKEVTKLVPAVSDEIKDAL 296
DPDS+LNSLTR++KE GPDG+E TK+VPA+S+++KDAL
Sbjct: 155 DPDSVLNSLTREVKEAGPDGQEETKIVPAMSEDVKDAL 192
Score = 131 bits (330), Expect(3) = 2e-91
Identities = 62/75 (82%), Positives = 70/75 (93%)
Frame = +1
Query: 349 DEIKDALLINIRRRMTLQPLKIQADIEMKCFQMDGVLHIKAAMRKAEAAGNEDCPVKMKL 528
+++KDAL+ NIRRRMT QPLK++ADIEMKCFQ DGVLHIK AMRKAEAAGN+DCPVK+KL
Sbjct: 186 EDVKDALIKNIRRRMTPQPLKVRADIEMKCFQFDGVLHIKEAMRKAEAAGNDDCPVKIKL 245
Query: 529 VAPPLYALTTQTLDK 573
VAPPLY LTTQTLDK
Sbjct: 246 VAPPLYVLTTQTLDK 260
Score = 82.8 bits (203), Expect(3) = 2e-91
Identities = 46/85 (54%), Positives = 53/85 (62%), Gaps = 8/85 (9%)
Frame = +2
Query: 641 TTQTLDKEQGILTLNNAIEACSAEIELHKGKVVVKEAPRAVSERDDQKFAKPV------- 799
TTQTLDKEQGI L AI AC+ IE HKGK+VVKE PRAVSERDD+ A+ +
Sbjct: 254 TTQTLDKEQGITVLEKAIAACTEAIEHHKGKLVVKETPRAVSERDDKLLAEHMAKLRQDN 313
Query: 800 -DXXXXXXXXXXXDTGMGEIDFENA 871
+ DTGMGE+D ENA
Sbjct: 314 EEISGDEDSEEEEDTGMGEVDVENA 338