BLASTX nr result

ID: Coptis24_contig00012476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012476
         (929 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279783.1| PREDICTED: uncharacterized protein ycf36 [Vi...   320   3e-85
ref|XP_002308564.1| predicted protein [Populus trichocarpa] gi|2...   318   1e-84
ref|XP_002516448.1| conserved hypothetical protein [Ricinus comm...   302   8e-80
ref|XP_003589013.1| hypothetical protein MTR_1g016360 [Medicago ...   290   3e-76
ref|XP_004157359.1| PREDICTED: uncharacterized protein LOC101226...   288   1e-75

>ref|XP_002279783.1| PREDICTED: uncharacterized protein ycf36 [Vitis vinifera]
          Length = 268

 Score =  320 bits (820), Expect = 3e-85
 Identities = 174/269 (64%), Positives = 198/269 (73%), Gaps = 14/269 (5%)
 Frame = -3

Query: 894 MATLSILSPKPPLKTIFLHN------PISINKQTTLPNLQHKHTIILSSK---SSSFR-- 748
           MAT   LS K    T F  +      PI+  K    P+L ++   IL S+   SSSF   
Sbjct: 1   MATPLFLSTKSTQLTFFFPSKPNFLPPINPIKN---PSLHYRDQKILISRIPLSSSFTNG 57

Query: 747 ---PPEAECPVPFDQQPINEYQSLSSSFPFSWAVTDDLVEYSIRLIATGASFAFFIGLPV 577
              PPE ECPVP DQQPINEYQ+LS+SFPFSWA + D VEY  RL  TG SFA FIGLPV
Sbjct: 58  SNTPPETECPVPLDQQPINEYQTLSTSFPFSWA-SGDFVEYCSRLAVTGVSFALFIGLPV 116

Query: 576 AWFGVVNPESQPLKCGIGALSSGLFVVTLAVLRMYLGWAYVGNRLLSATVEYEETGWYDG 397
           AWFG V P+S+PLK  +GA+SSG+FVVTLAV+RMYLGWAYVGNRLLSATVEYEETGWYDG
Sbjct: 117 AWFGAVGPDSEPLKRILGAVSSGIFVVTLAVVRMYLGWAYVGNRLLSATVEYEETGWYDG 176

Query: 396 QVWIKSAQVLARDRLLGSYSVKPVLSRLKLTLVGLATSLAACIFLLVNIEGSQKVSYFSS 217
           Q+W+K+A+VLARDRLLGS+SVKPVLSRLK TLV LA SL  C FLL+NIEGSQ+     S
Sbjct: 177 QIWVKTAEVLARDRLLGSFSVKPVLSRLKYTLVTLAASLFVCAFLLINIEGSQRNLNIVS 236

Query: 216 QEPGGRSVVGVYKDDSARLFEQDDFCGEP 130
              GGR++ GVY DDSAR FE D FCGEP
Sbjct: 237 NGGGGRAIPGVYNDDSARSFEPDAFCGEP 265


>ref|XP_002308564.1| predicted protein [Populus trichocarpa] gi|222854540|gb|EEE92087.1|
           predicted protein [Populus trichocarpa]
          Length = 259

 Score =  318 bits (815), Expect = 1e-84
 Identities = 162/252 (64%), Positives = 190/252 (75%), Gaps = 10/252 (3%)
 Frame = -3

Query: 849 IFLHNPISINKQTTLPNLQHKH----TIILSSKSSSFR------PPEAECPVPFDQQPIN 700
           + L +P  ++  T    + H H      +    SSSFR      PPE ECPVP DQQPIN
Sbjct: 6   LHLSSPFLLSSLTQKRFIYHHHHNYKNTLPKIPSSSFRNGSSNTPPETECPVPLDQQPIN 65

Query: 699 EYQSLSSSFPFSWAVTDDLVEYSIRLIATGASFAFFIGLPVAWFGVVNPESQPLKCGIGA 520
           EYQ+LS+SFPFSWA + D+VEY  RL  TGASFA  I LPVAWFG V P+++PLK  + A
Sbjct: 66  EYQNLSTSFPFSWA-SGDIVEYCSRLFVTGASFALLIALPVAWFGTVAPKTEPLKPVLAA 124

Query: 519 LSSGLFVVTLAVLRMYLGWAYVGNRLLSATVEYEETGWYDGQVWIKSAQVLARDRLLGSY 340
           LSSG+FVV+LAV+RMYLGWAYVGNRLLSATVEYEETGWYDGQ+W+K+A+VLARDRLLGS+
Sbjct: 125 LSSGVFVVSLAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVLARDRLLGSF 184

Query: 339 SVKPVLSRLKLTLVGLATSLAACIFLLVNIEGSQKVSYFSSQEPGGRSVVGVYKDDSARL 160
           SVKPVLSRLK TLV LA SL  C+ L +NIEG QK SY   +E GGR++ GVY DDSAR 
Sbjct: 185 SVKPVLSRLKYTLVTLAASLFVCVVLFINIEGGQKGSYTPFEEAGGRAIPGVYNDDSARS 244

Query: 159 FEQDDFCGEPSP 124
           FE D FCGEP+P
Sbjct: 245 FEPDAFCGEPAP 256


>ref|XP_002516448.1| conserved hypothetical protein [Ricinus communis]
           gi|223544268|gb|EEF45789.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 267

 Score =  302 bits (773), Expect = 8e-80
 Identities = 152/229 (66%), Positives = 177/229 (77%), Gaps = 5/229 (2%)
 Frame = -3

Query: 801 NLQHKHTIILSSKSSSFR-----PPEAECPVPFDQQPINEYQSLSSSFPFSWAVTDDLVE 637
           N +H   +I     SSFR     P E ECPVP +QQPINEYQSLS+SFPFSW  ++ +VE
Sbjct: 37  NQRHCRNLIPKLPLSSFRNGSNTPSETECPVPLEQQPINEYQSLSTSFPFSWPASN-IVE 95

Query: 636 YSIRLIATGASFAFFIGLPVAWFGVVNPESQPLKCGIGALSSGLFVVTLAVLRMYLGWAY 457
           Y  RL  TGASFA FIGLPVAWFG V PES+P K  I A SSG+ +V+LAV+RMYLGWAY
Sbjct: 96  YCSRLFVTGASFALFIGLPVAWFGSVRPESEPFKPIIAAASSGILLVSLAVVRMYLGWAY 155

Query: 456 VGNRLLSATVEYEETGWYDGQVWIKSAQVLARDRLLGSYSVKPVLSRLKLTLVGLATSLA 277
           VGNRLLSATVEYEETGWYDGQ+W+K+A+VLARDRLLGS+SVKPVLSRLK TL+ LAT L 
Sbjct: 156 VGNRLLSATVEYEETGWYDGQIWVKTAEVLARDRLLGSFSVKPVLSRLKYTLLTLATLLL 215

Query: 276 ACIFLLVNIEGSQKVSYFSSQEPGGRSVVGVYKDDSARLFEQDDFCGEP 130
            C+ L +NIEG+QK  Y +S+    R++ GVY DDSAR FE D FCGEP
Sbjct: 216 GCVVLFINIEGAQKGVYVTSEATRDRTIPGVYNDDSARSFEPDAFCGEP 264


>ref|XP_003589013.1| hypothetical protein MTR_1g016360 [Medicago truncatula]
           gi|355478061|gb|AES59264.1| hypothetical protein
           MTR_1g016360 [Medicago truncatula]
          Length = 252

 Score =  290 bits (743), Expect = 3e-76
 Identities = 156/262 (59%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
 Frame = -3

Query: 894 MATLSI-LSPK---PPLKTIFLHNPISINKQTTLPNLQHKHTIILSSKSSSFRPPEAECP 727
           MAT+SI +SPK   P  KT+F   PI  NK  T+ N  ++  + L   SS       ECP
Sbjct: 1   MATISIRMSPKLFSPSTKTLF---PIHTNKSITITNNSNRTKLSLLYLSSR---NGTECP 54

Query: 726 VPFDQQPINEYQSLSSSFPFSWAVTDDLVEYSIRLIATGASFAFFIGLPVAWFGVVNPES 547
           VP +QQPINEYQSLS+SFPFSWA   D+VEY  RL   G SFA  +GLPVAWFG V  + 
Sbjct: 55  VPLEQQPINEYQSLSTSFPFSWAA-GDVVEYGSRLFVVGFSFALLVGLPVAWFGTVGAQY 113

Query: 546 QPLKCGIGALSSGLFVVTLAVLRMYLGWAYVGNRLLSATVEYEETGWYDGQVWIKSAQVL 367
           +P K  + A SSG+  VT AV+RMYLGWAYVGNRLLSATVEYEETGWYDGQ+W+K+A+VL
Sbjct: 114 EPAKRIVCAASSGVLAVTFAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 173

Query: 366 ARDRLLGSYSVKPVLSRLKLTLVGLATSLAACIFLLVNIEGSQKVSYFSSQEPGGRSVVG 187
           ARDRLLGS+SVKPVLSRLK+TLVGLA  L  C  + +NI+     SY +S+E G R++ G
Sbjct: 174 ARDRLLGSFSVKPVLSRLKITLVGLAACLVTCALIFINID----ESYLTSRETGVRAIPG 229

Query: 186 VYKDDSARLFEQDDFCGEPSPQ 121
            Y D+SAR FE D FCGEP  Q
Sbjct: 230 AYNDESARSFEPDAFCGEPDLQ 251


>ref|XP_004157359.1| PREDICTED: uncharacterized protein LOC101226963 [Cucumis sativus]
          Length = 297

 Score =  288 bits (737), Expect = 1e-75
 Identities = 148/241 (61%), Positives = 179/241 (74%), Gaps = 5/241 (2%)
 Frame = -3

Query: 843 LHNPISINKQTTLPNLQHKHTIILSSKSSSFRPPEAECPVPFDQQPINEYQSLSSSFPFS 664
           L +P +  +   L N   + T+  S +  S  PPE  CPVP +Q PINEYQ+LS+SFPFS
Sbjct: 50  LISPFTNTRLLHLRNSVSRMTLSFSFRKGSNVPPETGCPVPPEQLPINEYQTLSASFPFS 109

Query: 663 WAVTDDLVEYSIRLIATGASFAFFIGLPVAWFGVVNPESQPLKCGIGALSSGLFVVTLAV 484
           WA   D+VE+  RL+ATGASFA FIGLPVAWFG V  ES PLK  + A+SSG+  VT+AV
Sbjct: 110 WAA-GDIVEFCSRLVATGASFALFIGLPVAWFGTVGVESDPLKRSLCAVSSGILFVTIAV 168

Query: 483 LRMYLGWAYVGNRLLSATVEYEETGWYDGQVWIKSAQVLARDRLLGSYSVKPVLSRLKLT 304
           LRMYLGWAYVGNRLLSATVEYEETGWYDGQ+W+K+AQVLARDRLLGSY+VKPVL+RLK T
Sbjct: 169 LRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVLARDRLLGSYTVKPVLNRLKYT 228

Query: 303 LVGLATSLAACIFLLVNIEGSQKVSYF-----SSQEPGGRSVVGVYKDDSARLFEQDDFC 139
           LV LA SL   I +L+NI+G + +  F     ++ + GGR + GVY D+SAR FE D FC
Sbjct: 229 LVSLAASLFVSIVVLINIDGGELLGPFFTGKSAANDGGGRVIPGVYSDESARSFEPDAFC 288

Query: 138 G 136
           G
Sbjct: 289 G 289


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