BLASTX nr result

ID: Coptis24_contig00012473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012473
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324467.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
ref|XP_002266770.1| PREDICTED: WD repeat-containing protein 75 [...   118   4e-25
ref|XP_002329663.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002533224.1| wd40 protein, putative [Ricinus communis] gi...   108   6e-22
ref|XP_004161786.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-co...   104   9e-21

>ref|XP_002324467.1| predicted protein [Populus trichocarpa] gi|222865901|gb|EEF03032.1|
           predicted protein [Populus trichocarpa]
          Length = 811

 Score =  122 bits (306), Expect = 3e-26
 Identities = 57/84 (67%), Positives = 70/84 (83%)
 Frame = +3

Query: 3   LLKMPSTEIIKSISGIELPCSFPEIYGGLRGGVVFDHSAGLVVVQTESYSIQFYSLFDNR 182
           LLKMPS EI+KSISGI+LPCSFPE+Y GLR G+ FD +AGLV + TE+Y IQ YSL D+R
Sbjct: 349 LLKMPSMEILKSISGIKLPCSFPEMYNGLRSGIAFDRNAGLVALPTENYCIQLYSLLDDR 408

Query: 183 EISQIQVCERSHQADDEVTLVLAL 254
            IS++QVCER+HQ  DEVT+V+ L
Sbjct: 409 GISEVQVCERNHQPGDEVTVVVTL 432


>ref|XP_002266770.1| PREDICTED: WD repeat-containing protein 75 [Vitis vinifera]
           gi|296087114|emb|CBI33488.3| unnamed protein product
           [Vitis vinifera]
          Length = 815

 Score =  118 bits (296), Expect = 4e-25
 Identities = 55/84 (65%), Positives = 69/84 (82%)
 Frame = +3

Query: 3   LLKMPSTEIIKSISGIELPCSFPEIYGGLRGGVVFDHSAGLVVVQTESYSIQFYSLFDNR 182
           LLKMPS EI+KSISGI+LPCSFPEIY GL    +FD +AGLV  +TE+Y IQFYSLFD+R
Sbjct: 347 LLKMPSMEILKSISGIKLPCSFPEIYEGLHSRFIFDQTAGLVAFRTENYCIQFYSLFDDR 406

Query: 183 EISQIQVCERSHQADDEVTLVLAL 254
           E  ++Q+CER+HQ  D+VT+V+ L
Sbjct: 407 ENFEVQICERNHQPSDDVTVVVTL 430


>ref|XP_002329663.1| predicted protein [Populus trichocarpa] gi|222870544|gb|EEF07675.1|
           predicted protein [Populus trichocarpa]
          Length = 812

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/84 (65%), Positives = 70/84 (83%)
 Frame = +3

Query: 3   LLKMPSTEIIKSISGIELPCSFPEIYGGLRGGVVFDHSAGLVVVQTESYSIQFYSLFDNR 182
           LLKMPS EI+KSISGI+LPCSFPE+  GL+ G+ FD +AGLV ++TE+Y IQ YSLFD+R
Sbjct: 349 LLKMPSMEILKSISGIKLPCSFPEMCNGLQSGIAFDCNAGLVALRTENYCIQLYSLFDDR 408

Query: 183 EISQIQVCERSHQADDEVTLVLAL 254
            IS++ VCER+HQ  DEVT+V+ L
Sbjct: 409 GISEVVVCERNHQPGDEVTVVVTL 432


>ref|XP_002533224.1| wd40 protein, putative [Ricinus communis]
           gi|223526967|gb|EEF29164.1| wd40 protein, putative
           [Ricinus communis]
          Length = 807

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/84 (61%), Positives = 68/84 (80%)
 Frame = +3

Query: 3   LLKMPSTEIIKSISGIELPCSFPEIYGGLRGGVVFDHSAGLVVVQTESYSIQFYSLFDNR 182
           +LKMPS  I+KSISGI+LPCSFP++      GV FD ++GLV V+TE+Y IQ YSLFD+R
Sbjct: 345 ILKMPSMGILKSISGIKLPCSFPKMSKVSFSGVAFDRTSGLVAVRTENYCIQLYSLFDDR 404

Query: 183 EISQIQVCERSHQADDEVTLVLAL 254
            IS++QVCER++Q  DE+TLV+AL
Sbjct: 405 GISEVQVCERNYQPSDEITLVVAL 428


>ref|XP_004161786.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-containing protein
           75-like [Cucumis sativus]
          Length = 810

 Score =  104 bits (259), Expect = 9e-21
 Identities = 47/82 (57%), Positives = 66/82 (80%)
 Frame = +3

Query: 3   LLKMPSTEIIKSISGIELPCSFPEIYGGLRGGVVFDHSAGLVVVQTESYSIQFYSLFDNR 182
           LLKMPS EI+KSISGI+LPCSFP++  G   G  F+ + GLV +++E+YSIQFYSLFD+ 
Sbjct: 348 LLKMPSMEILKSISGIKLPCSFPDVCQGSNNGFAFNQNDGLVALRSENYSIQFYSLFDDC 407

Query: 183 EISQIQVCERSHQADDEVTLVL 248
            I ++Q+CER+HQ  +E+T+V+
Sbjct: 408 GICEVQICERNHQPGEELTVVI 429


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