BLASTX nr result
ID: Coptis24_contig00012473
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00012473 (259 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002324467.1| predicted protein [Populus trichocarpa] gi|2... 122 3e-26 ref|XP_002266770.1| PREDICTED: WD repeat-containing protein 75 [... 118 4e-25 ref|XP_002329663.1| predicted protein [Populus trichocarpa] gi|2... 116 2e-24 ref|XP_002533224.1| wd40 protein, putative [Ricinus communis] gi... 108 6e-22 ref|XP_004161786.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-co... 104 9e-21 >ref|XP_002324467.1| predicted protein [Populus trichocarpa] gi|222865901|gb|EEF03032.1| predicted protein [Populus trichocarpa] Length = 811 Score = 122 bits (306), Expect = 3e-26 Identities = 57/84 (67%), Positives = 70/84 (83%) Frame = +3 Query: 3 LLKMPSTEIIKSISGIELPCSFPEIYGGLRGGVVFDHSAGLVVVQTESYSIQFYSLFDNR 182 LLKMPS EI+KSISGI+LPCSFPE+Y GLR G+ FD +AGLV + TE+Y IQ YSL D+R Sbjct: 349 LLKMPSMEILKSISGIKLPCSFPEMYNGLRSGIAFDRNAGLVALPTENYCIQLYSLLDDR 408 Query: 183 EISQIQVCERSHQADDEVTLVLAL 254 IS++QVCER+HQ DEVT+V+ L Sbjct: 409 GISEVQVCERNHQPGDEVTVVVTL 432 >ref|XP_002266770.1| PREDICTED: WD repeat-containing protein 75 [Vitis vinifera] gi|296087114|emb|CBI33488.3| unnamed protein product [Vitis vinifera] Length = 815 Score = 118 bits (296), Expect = 4e-25 Identities = 55/84 (65%), Positives = 69/84 (82%) Frame = +3 Query: 3 LLKMPSTEIIKSISGIELPCSFPEIYGGLRGGVVFDHSAGLVVVQTESYSIQFYSLFDNR 182 LLKMPS EI+KSISGI+LPCSFPEIY GL +FD +AGLV +TE+Y IQFYSLFD+R Sbjct: 347 LLKMPSMEILKSISGIKLPCSFPEIYEGLHSRFIFDQTAGLVAFRTENYCIQFYSLFDDR 406 Query: 183 EISQIQVCERSHQADDEVTLVLAL 254 E ++Q+CER+HQ D+VT+V+ L Sbjct: 407 ENFEVQICERNHQPSDDVTVVVTL 430 >ref|XP_002329663.1| predicted protein [Populus trichocarpa] gi|222870544|gb|EEF07675.1| predicted protein [Populus trichocarpa] Length = 812 Score = 116 bits (291), Expect = 2e-24 Identities = 55/84 (65%), Positives = 70/84 (83%) Frame = +3 Query: 3 LLKMPSTEIIKSISGIELPCSFPEIYGGLRGGVVFDHSAGLVVVQTESYSIQFYSLFDNR 182 LLKMPS EI+KSISGI+LPCSFPE+ GL+ G+ FD +AGLV ++TE+Y IQ YSLFD+R Sbjct: 349 LLKMPSMEILKSISGIKLPCSFPEMCNGLQSGIAFDCNAGLVALRTENYCIQLYSLFDDR 408 Query: 183 EISQIQVCERSHQADDEVTLVLAL 254 IS++ VCER+HQ DEVT+V+ L Sbjct: 409 GISEVVVCERNHQPGDEVTVVVTL 432 >ref|XP_002533224.1| wd40 protein, putative [Ricinus communis] gi|223526967|gb|EEF29164.1| wd40 protein, putative [Ricinus communis] Length = 807 Score = 108 bits (269), Expect = 6e-22 Identities = 52/84 (61%), Positives = 68/84 (80%) Frame = +3 Query: 3 LLKMPSTEIIKSISGIELPCSFPEIYGGLRGGVVFDHSAGLVVVQTESYSIQFYSLFDNR 182 +LKMPS I+KSISGI+LPCSFP++ GV FD ++GLV V+TE+Y IQ YSLFD+R Sbjct: 345 ILKMPSMGILKSISGIKLPCSFPKMSKVSFSGVAFDRTSGLVAVRTENYCIQLYSLFDDR 404 Query: 183 EISQIQVCERSHQADDEVTLVLAL 254 IS++QVCER++Q DE+TLV+AL Sbjct: 405 GISEVQVCERNYQPSDEITLVVAL 428 >ref|XP_004161786.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-containing protein 75-like [Cucumis sativus] Length = 810 Score = 104 bits (259), Expect = 9e-21 Identities = 47/82 (57%), Positives = 66/82 (80%) Frame = +3 Query: 3 LLKMPSTEIIKSISGIELPCSFPEIYGGLRGGVVFDHSAGLVVVQTESYSIQFYSLFDNR 182 LLKMPS EI+KSISGI+LPCSFP++ G G F+ + GLV +++E+YSIQFYSLFD+ Sbjct: 348 LLKMPSMEILKSISGIKLPCSFPDVCQGSNNGFAFNQNDGLVALRSENYSIQFYSLFDDC 407 Query: 183 EISQIQVCERSHQADDEVTLVL 248 I ++Q+CER+HQ +E+T+V+ Sbjct: 408 GICEVQICERNHQPGEELTVVI 429