BLASTX nr result
ID: Coptis24_contig00012466
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00012466
(1825 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278951.1| PREDICTED: probable alanyl-tRNA synthetase, ... 775 0.0
ref|XP_002313683.1| predicted protein [Populus trichocarpa] gi|3... 774 0.0
ref|XP_002534095.1| alanyl-tRNA synthetase, putative [Ricinus co... 764 0.0
ref|XP_004166131.1| PREDICTED: probable alanine--tRNA ligase, ch... 736 0.0
ref|XP_004139952.1| PREDICTED: probable alanine--tRNA ligase, ch... 736 0.0
>ref|XP_002278951.1| PREDICTED: probable alanyl-tRNA synthetase, chloroplastic [Vitis
vinifera] gi|297744517|emb|CBI37779.3| unnamed protein
product [Vitis vinifera]
Length = 1006
Score = 775 bits (2001), Expect = 0.0
Identities = 390/546 (71%), Positives = 458/546 (83%)
Frame = +3
Query: 3 LRREELRFVLSLERGEKLLDQLLNTALLSAQENGTAPCLSGDNAFILYDRYGFPVEITAE 182
L+REELRFV +LERGEKLLD++L ALL++ ENG P LSG + F+LYD YGFPVEIT E
Sbjct: 461 LKREELRFVQTLERGEKLLDEMLANALLNSNENGNGPILSGKDVFLLYDTYGFPVEITTE 520
Query: 183 VAEERGVRVDMNGFDIEMEKRRQNSQEAHTVVKLSVGDVSEFTDRVPDTEFLGYDTLSTR 362
AEERGV +DMNGF+IEME +R+ SQ AH VKL+VG+ ++ T+ + DTEFLGY+TLST+
Sbjct: 521 AAEERGVGIDMNGFEIEMENQRRQSQAAHNAVKLAVGNSADLTENISDTEFLGYETLSTK 580
Query: 363 AVIECLLVSGKREVKVSEGKDVEILLNRTPFYAESGGQIGDNGYIYVLDAESKGKAVVEI 542
AVIE LLV+G ++VSEG DVEI LNRTPFYAESGGQIGD+G++YV + ++ AVVEI
Sbjct: 581 AVIEGLLVNGNPVIQVSEGSDVEIFLNRTPFYAESGGQIGDHGFLYVNEDRNQKNAVVEI 640
Query: 543 RDVQKSLGNMYVHKGTVKXXXXXXXXXXXXXXXAKLRQRAKVHHTATHLLQAALKSVIGQ 722
+DVQKSLGN++VHKGT+K A LRQRAK+HHTATHLLQAALK VIG
Sbjct: 641 KDVQKSLGNIFVHKGTIKEGVVEVGKEVEAAVDANLRQRAKIHHTATHLLQAALKKVIGD 700
Query: 723 ETAQAGSLVAFDRLRFDFNFHRPLSEHEVMETERMVNRWIGDATDLETKVMALTDAKGAG 902
ET+QAGSLVAFDRLRFDFNFHRPL E E++E E ++N WIGDAT L+TKVM L DAK AG
Sbjct: 701 ETSQAGSLVAFDRLRFDFNFHRPLQEKELVEIEELINGWIGDATLLQTKVMPLADAKRAG 760
Query: 903 AIAMFGEKYGEQVRVVEVPGVSMELCGGTHVCNTSDLRGFKIVSEQGIASGIRRIEAVAG 1082
AIAMFGEKYGEQVRVVEVPGVSMELCGGTHV NT ++RGFKI+SEQGIASGIRRIEAVAG
Sbjct: 761 AIAMFGEKYGEQVRVVEVPGVSMELCGGTHVSNTCEIRGFKIISEQGIASGIRRIEAVAG 820
Query: 1083 EAFIDYMDVRDSHMKHLCSTLKVKAEDVRPRIESLLEELRMARNEVSALRAQVAVYKASI 1262
+AFI+Y++ RD+HM+ LCSTLKVKAE+V R+E+LLEELRM RNEVSA+RA+ AVYKAS+
Sbjct: 821 DAFIEYVNARDNHMRQLCSTLKVKAEEVTTRVEALLEELRMTRNEVSAVRAKAAVYKASV 880
Query: 1263 VASKAFSVGTTNTIRVLVENMGDLDADSLISAAEYLIDNLEDPAVVILGSCPAEGKVGLV 1442
+A AF VGT+ IRVLVE+M D+DADSL SAAEYLID L+DPA VILGSCP+E KV LV
Sbjct: 881 MAGNAFPVGTSKKIRVLVESMDDIDADSLKSAAEYLIDTLQDPAAVILGSCPSEEKVSLV 940
Query: 1443 AAFSPGVVDLGLQAGKFIGPIAKLCXXXXXXKPNFAQAGGKEPENLASALEKARTDLVAI 1622
AAF+PGVVDLG+QAGKFIGPIAKLC +PNFAQAGG++PENL+ ALEKAR +LVAI
Sbjct: 941 AAFTPGVVDLGIQAGKFIGPIAKLCGGGGGGRPNFAQAGGRKPENLSGALEKAREELVAI 1000
Query: 1623 LSEKVS 1640
LSEK S
Sbjct: 1001 LSEKAS 1006
>ref|XP_002313683.1| predicted protein [Populus trichocarpa]
gi|313471500|sp|B9HQZ6.1|SYAP_POPTR RecName:
Full=Probable alanine--tRNA ligase, chloroplastic;
AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS
gi|222850091|gb|EEE87638.1| predicted protein [Populus
trichocarpa]
Length = 994
Score = 774 bits (1999), Expect = 0.0
Identities = 388/546 (71%), Positives = 464/546 (84%)
Frame = +3
Query: 3 LRREELRFVLSLERGEKLLDQLLNTALLSAQENGTAPCLSGDNAFILYDRYGFPVEITAE 182
L+REELRFV +LERGEKLLDQ+L ALL+AQ++ T PCLSG + F+LYD +GFPVEIT E
Sbjct: 449 LQREELRFVQTLERGEKLLDQMLAEALLNAQKSETLPCLSGKDVFLLYDTFGFPVEITTE 508
Query: 183 VAEERGVRVDMNGFDIEMEKRRQNSQEAHTVVKLSVGDVSEFTDRVPDTEFLGYDTLSTR 362
VAEE+GV++DM+GF++EME +R+ SQ AH VVKL+V + + + V DTEFLGYDTLS R
Sbjct: 509 VAEEQGVKIDMDGFEVEMENQRRQSQAAHNVVKLAVENGGDLAENVHDTEFLGYDTLSAR 568
Query: 363 AVIECLLVSGKREVKVSEGKDVEILLNRTPFYAESGGQIGDNGYIYVLDAESKGKAVVEI 542
AV+E LL++GK ++VSEG +VE+LLN+TPFYAESGGQIGD+G++YV +SK AVVEI
Sbjct: 569 AVVESLLLNGKSVIQVSEGSEVEVLLNKTPFYAESGGQIGDHGFLYVTQDQSKQTAVVEI 628
Query: 543 RDVQKSLGNMYVHKGTVKXXXXXXXXXXXXXXXAKLRQRAKVHHTATHLLQAALKSVIGQ 722
+DVQKSLG+++VHKGT++ AKLRQRAKVHHTATHLLQ+ALK VIGQ
Sbjct: 629 KDVQKSLGSVFVHKGTIREGVLEVGREVEAAVDAKLRQRAKVHHTATHLLQSALKKVIGQ 688
Query: 723 ETAQAGSLVAFDRLRFDFNFHRPLSEHEVMETERMVNRWIGDATDLETKVMALTDAKGAG 902
ET+QAGSLVAFDRLRFDFNFHRPL + E+ E E ++N WIGD T L+TKVM+LTDAK AG
Sbjct: 689 ETSQAGSLVAFDRLRFDFNFHRPLHDSELEEIENLINGWIGDGTLLQTKVMSLTDAKEAG 748
Query: 903 AIAMFGEKYGEQVRVVEVPGVSMELCGGTHVCNTSDLRGFKIVSEQGIASGIRRIEAVAG 1082
AIAMFGEKYGEQVRVVEVPGVSMELCGGTHV NTS++R FKI+SEQGIASGIRRIEAVAG
Sbjct: 749 AIAMFGEKYGEQVRVVEVPGVSMELCGGTHVSNTSEIRAFKIISEQGIASGIRRIEAVAG 808
Query: 1083 EAFIDYMDVRDSHMKHLCSTLKVKAEDVRPRIESLLEELRMARNEVSALRAQVAVYKASI 1262
EAFI+Y++ RDS MK LCSTLKVKAE+V R+++LLEELR RNEVSALRA+ AVYKAS+
Sbjct: 809 EAFIEYINARDSQMKLLCSTLKVKAEEVTTRVDNLLEELRTVRNEVSALRAKAAVYKASM 868
Query: 1263 VASKAFSVGTTNTIRVLVENMGDLDADSLISAAEYLIDNLEDPAVVILGSCPAEGKVGLV 1442
+ASKAFSVGT+ TIRVLVE+M D DAD+L SAAEYL+D L+DPA +ILGSCP EGKV LV
Sbjct: 869 IASKAFSVGTSKTIRVLVESMDDFDADALKSAAEYLMDTLQDPAAIILGSCPDEGKVSLV 928
Query: 1443 AAFSPGVVDLGLQAGKFIGPIAKLCXXXXXXKPNFAQAGGKEPENLASALEKARTDLVAI 1622
AAF+PGVVD+G+QAGKFIGPIAKLC +PNFAQAGG++PENL +ALEKARTDL+ I
Sbjct: 929 AAFTPGVVDIGIQAGKFIGPIAKLCGGGGGGRPNFAQAGGRKPENLTNALEKARTDLILI 988
Query: 1623 LSEKVS 1640
L+EK +
Sbjct: 989 LTEKAN 994
>ref|XP_002534095.1| alanyl-tRNA synthetase, putative [Ricinus communis]
gi|223525858|gb|EEF28289.1| alanyl-tRNA synthetase,
putative [Ricinus communis]
Length = 815
Score = 764 bits (1974), Expect = 0.0
Identities = 387/546 (70%), Positives = 458/546 (83%)
Frame = +3
Query: 3 LRREELRFVLSLERGEKLLDQLLNTALLSAQENGTAPCLSGDNAFILYDRYGFPVEITAE 182
L+REE RFV +LERGEKLLDQ+L AL S Q+ G PCLSG + F+LYD YGFPVEIT E
Sbjct: 270 LQREEFRFVQTLERGEKLLDQMLEDALSSGQKKGVIPCLSGKDVFLLYDTYGFPVEITTE 329
Query: 183 VAEERGVRVDMNGFDIEMEKRRQNSQEAHTVVKLSVGDVSEFTDRVPDTEFLGYDTLSTR 362
VAEE GV++DM+GFDIEMEK+R+ SQ AH V+KL+V D + ++ V DTEFLGYDTLS R
Sbjct: 330 VAEEHGVKIDMDGFDIEMEKQRRQSQAAHNVIKLTVEDGGDLSENVSDTEFLGYDTLSAR 389
Query: 363 AVIECLLVSGKREVKVSEGKDVEILLNRTPFYAESGGQIGDNGYIYVLDAESKGKAVVEI 542
AVI+ LLV+GK ++V EG +VEILLN+TPFYAESGGQIGD+G++YV + ESK +A+VEI
Sbjct: 390 AVIDSLLVNGKPVIQVPEGSEVEILLNKTPFYAESGGQIGDHGFLYVTEGESKPRAIVEI 449
Query: 543 RDVQKSLGNMYVHKGTVKXXXXXXXXXXXXXXXAKLRQRAKVHHTATHLLQAALKSVIGQ 722
+DVQKSLGN++VHKGT++ KLRQRAKVHHTATHLLQ+ALK VIGQ
Sbjct: 450 KDVQKSLGNVFVHKGTIREGLLEVGREVEAAVDPKLRQRAKVHHTATHLLQSALKKVIGQ 509
Query: 723 ETAQAGSLVAFDRLRFDFNFHRPLSEHEVMETERMVNRWIGDATDLETKVMALTDAKGAG 902
ET+QAGSLVAFDRLRFDFNFHRPL + E+ E E ++N WIGDAT L+TKVM++TDAK AG
Sbjct: 510 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIEALINGWIGDATLLQTKVMSITDAKNAG 569
Query: 903 AIAMFGEKYGEQVRVVEVPGVSMELCGGTHVCNTSDLRGFKIVSEQGIASGIRRIEAVAG 1082
AIAMFGEKYGEQVRVVEVPGVSMELCGGTHV NTS++R FKI+SEQGIASGIRRIEAVAG
Sbjct: 570 AIAMFGEKYGEQVRVVEVPGVSMELCGGTHVSNTSEIRAFKIISEQGIASGIRRIEAVAG 629
Query: 1083 EAFIDYMDVRDSHMKHLCSTLKVKAEDVRPRIESLLEELRMARNEVSALRAQVAVYKASI 1262
EAFI+Y++ RDS + LCSTLKVKAE+V R+E+LLEELR+ARNEVSA+R++ AVYKAS
Sbjct: 630 EAFIEYINARDSQITRLCSTLKVKAEEVTTRVENLLEELRIARNEVSAMRSKAAVYKAST 689
Query: 1263 VASKAFSVGTTNTIRVLVENMGDLDADSLISAAEYLIDNLEDPAVVILGSCPAEGKVGLV 1442
+ASKA SVGT+ +IRVLVE+M D+DADSL SAAEYLID L DPA V+LGS P EGKV LV
Sbjct: 690 MASKAVSVGTSKSIRVLVESMDDIDADSLKSAAEYLIDALGDPAAVVLGSYPDEGKVSLV 749
Query: 1443 AAFSPGVVDLGLQAGKFIGPIAKLCXXXXXXKPNFAQAGGKEPENLASALEKARTDLVAI 1622
AAF+PGVV+LG+QAGKFIGPIAKLC +PNFAQAGG++P NL SALEKA DL++I
Sbjct: 750 AAFTPGVVNLGVQAGKFIGPIAKLCGGGGGGRPNFAQAGGRKPGNLPSALEKAHADLLSI 809
Query: 1623 LSEKVS 1640
L+EK S
Sbjct: 810 LTEKAS 815
>ref|XP_004166131.1| PREDICTED: probable alanine--tRNA ligase, chloroplastic-like [Cucumis
sativus]
Length = 956
Score = 736 bits (1901), Expect = 0.0
Identities = 366/546 (67%), Positives = 447/546 (81%)
Frame = +3
Query: 3 LRREELRFVLSLERGEKLLDQLLNTALLSAQENGTAPCLSGDNAFILYDRYGFPVEITAE 182
L+REELRFV +LERGEKLL+++L AL SA + G PCL+G +AF+LYD YGFPVEI+ E
Sbjct: 411 LKREELRFVQTLERGEKLLEEMLADALASANDGGRIPCLAGKDAFLLYDTYGFPVEISTE 470
Query: 183 VAEERGVRVDMNGFDIEMEKRRQNSQEAHTVVKLSVGDVSEFTDRVPDTEFLGYDTLSTR 362
VA+ERGV VDM GFDIEM+ +R+ SQ AH VVKL VG+ ++ + + DTEFLGYDTLS +
Sbjct: 471 VAQERGVVVDMEGFDIEMDNQRRQSQAAHNVVKLEVGEGADIMENISDTEFLGYDTLSAK 530
Query: 363 AVIECLLVSGKREVKVSEGKDVEILLNRTPFYAESGGQIGDNGYIYVLDAESKGKAVVEI 542
A++E L+V+G ++VSEG DVE+LLNRTPFYAESGGQIGD+G+IY+ + E+ VVE+
Sbjct: 531 AIVESLIVNGNPVLQVSEGNDVEVLLNRTPFYAESGGQIGDHGFIYISEGENSQNVVVEV 590
Query: 543 RDVQKSLGNMYVHKGTVKXXXXXXXXXXXXXXXAKLRQRAKVHHTATHLLQAALKSVIGQ 722
+DVQKS G+++VHKG +K A+LRQ AKVHHTATHLLQ+ALK +IGQ
Sbjct: 591 KDVQKSAGSIFVHKGIIKQGILEVGREVEAAVDAELRQGAKVHHTATHLLQSALKRIIGQ 650
Query: 723 ETAQAGSLVAFDRLRFDFNFHRPLSEHEVMETERMVNRWIGDATDLETKVMALTDAKGAG 902
ET+QAGSLVAFDRLRFDFN+HRPL + E+++ E ++N WIGDA L+TKVMALT+AK AG
Sbjct: 651 ETSQAGSLVAFDRLRFDFNYHRPLVDAEIVKIEELINGWIGDAVLLQTKVMALTEAKKAG 710
Query: 903 AIAMFGEKYGEQVRVVEVPGVSMELCGGTHVCNTSDLRGFKIVSEQGIASGIRRIEAVAG 1082
AIAMFGEKYGE+VRVVEVPGVSMELCGGTHV NTS++RGFKI+SEQGIASG+RRIEAVAG
Sbjct: 711 AIAMFGEKYGEEVRVVEVPGVSMELCGGTHVFNTSEIRGFKIISEQGIASGVRRIEAVAG 770
Query: 1083 EAFIDYMDVRDSHMKHLCSTLKVKAEDVRPRIESLLEELRMARNEVSALRAQVAVYKASI 1262
+AFI+Y++ RD HMK LC+ LKVKAEDV R+++LLEELRMARNE+S LR + AV KAS
Sbjct: 771 DAFIEYVNARDYHMKRLCTMLKVKAEDVTTRVDNLLEELRMARNEISNLREKTAVAKASS 830
Query: 1263 VASKAFSVGTTNTIRVLVENMGDLDADSLISAAEYLIDNLEDPAVVILGSCPAEGKVGLV 1442
+A+KAF VGT+ IRVLVE M D DADSL SAAE+L+DNL+DP ++LGSCP EGKV LV
Sbjct: 831 IANKAFVVGTSKEIRVLVEYMDDADADSLKSAAEFLMDNLQDPVAIVLGSCPGEGKVSLV 890
Query: 1443 AAFSPGVVDLGLQAGKFIGPIAKLCXXXXXXKPNFAQAGGKEPENLASALEKARTDLVAI 1622
AAF+P VVDLG+QAGKFIG IAKLC +PNFAQAGG++PENL ALE AR++L I
Sbjct: 891 AAFTPSVVDLGVQAGKFIGSIAKLCGGGGGGRPNFAQAGGRKPENLLDALENARSELTRI 950
Query: 1623 LSEKVS 1640
LSEK S
Sbjct: 951 LSEKAS 956
>ref|XP_004139952.1| PREDICTED: probable alanine--tRNA ligase, chloroplastic-like [Cucumis
sativus]
Length = 956
Score = 736 bits (1901), Expect = 0.0
Identities = 366/546 (67%), Positives = 447/546 (81%)
Frame = +3
Query: 3 LRREELRFVLSLERGEKLLDQLLNTALLSAQENGTAPCLSGDNAFILYDRYGFPVEITAE 182
L+REELRFV +LERGEKLL+++L AL SA + G PCL+G +AF+LYD YGFPVEI+ E
Sbjct: 411 LKREELRFVQTLERGEKLLEEMLADALASANDGGRIPCLAGKDAFLLYDTYGFPVEISTE 470
Query: 183 VAEERGVRVDMNGFDIEMEKRRQNSQEAHTVVKLSVGDVSEFTDRVPDTEFLGYDTLSTR 362
VA+ERGV VDM GFDIEM+ +R+ SQ AH VVKL VG+ ++ + + DTEFLGYDTLS +
Sbjct: 471 VAQERGVVVDMEGFDIEMDNQRRQSQAAHNVVKLEVGEGADIMENISDTEFLGYDTLSAK 530
Query: 363 AVIECLLVSGKREVKVSEGKDVEILLNRTPFYAESGGQIGDNGYIYVLDAESKGKAVVEI 542
A++E L+V+G ++VSEG DVE+LLNRTPFYAESGGQIGD+G+IY+ + E+ VVE+
Sbjct: 531 AIVESLIVNGNPVLQVSEGNDVEVLLNRTPFYAESGGQIGDHGFIYISEGENSQNVVVEV 590
Query: 543 RDVQKSLGNMYVHKGTVKXXXXXXXXXXXXXXXAKLRQRAKVHHTATHLLQAALKSVIGQ 722
+DVQKS G+++VHKG +K A+LRQ AKVHHTATHLLQ+ALK +IGQ
Sbjct: 591 KDVQKSAGSIFVHKGIIKQGILEVGREVEAAVDAELRQGAKVHHTATHLLQSALKRIIGQ 650
Query: 723 ETAQAGSLVAFDRLRFDFNFHRPLSEHEVMETERMVNRWIGDATDLETKVMALTDAKGAG 902
ET+QAGSLVAFDRLRFDFN+HRPL + E+++ E ++N WIGDA L+TKVMALT+AK AG
Sbjct: 651 ETSQAGSLVAFDRLRFDFNYHRPLVDAEIVKIEELINGWIGDAVLLQTKVMALTEAKKAG 710
Query: 903 AIAMFGEKYGEQVRVVEVPGVSMELCGGTHVCNTSDLRGFKIVSEQGIASGIRRIEAVAG 1082
AIAMFGEKYGE+VRVVEVPGVSMELCGGTHV NTS++RGFKI+SEQGIASG+RRIEAVAG
Sbjct: 711 AIAMFGEKYGEEVRVVEVPGVSMELCGGTHVFNTSEIRGFKIISEQGIASGVRRIEAVAG 770
Query: 1083 EAFIDYMDVRDSHMKHLCSTLKVKAEDVRPRIESLLEELRMARNEVSALRAQVAVYKASI 1262
+AFI+Y++ RD HMK LC+ LKVKAEDV R+++LLEELRMARNE+S LR + AV KAS
Sbjct: 771 DAFIEYVNARDYHMKRLCTMLKVKAEDVTTRVDNLLEELRMARNEISNLREKTAVAKASS 830
Query: 1263 VASKAFSVGTTNTIRVLVENMGDLDADSLISAAEYLIDNLEDPAVVILGSCPAEGKVGLV 1442
+A+KAF VGT+ IRVLVE M D DADSL SAAE+L+DNL+DP ++LGSCP EGKV LV
Sbjct: 831 IANKAFVVGTSKEIRVLVEYMDDADADSLKSAAEFLMDNLQDPVAIVLGSCPGEGKVSLV 890
Query: 1443 AAFSPGVVDLGLQAGKFIGPIAKLCXXXXXXKPNFAQAGGKEPENLASALEKARTDLVAI 1622
AAF+P VVDLG+QAGKFIG IAKLC +PNFAQAGG++PENL ALE AR++L I
Sbjct: 891 AAFTPSVVDLGVQAGKFIGSIAKLCGGGGGGRPNFAQAGGRKPENLLDALENARSELTRI 950
Query: 1623 LSEKVS 1640
LSEK S
Sbjct: 951 LSEKAS 956