BLASTX nr result

ID: Coptis24_contig00012461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012461
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539578.1| PREDICTED: probable disease resistance prote...    69   4e-10
ref|XP_002868530.1| predicted protein [Arabidopsis lyrata subsp....    66   3e-09
dbj|BAD36180.1| putative RPS2 [Oryza sativa Japonica Group] gi|5...    66   3e-09
ref|XP_002530179.1| Disease resistance protein RPM1, putative [R...    66   3e-09
ref|NP_001062837.1| Os09g0311600 [Oryza sativa Japonica Group] g...    66   3e-09

>ref|XP_003539578.1| PREDICTED: probable disease resistance protein At4g27220-like
           [Glycine max]
          Length = 962

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
 Frame = -2

Query: 269 TRSLEVCHEMQFDKYLKVEQLSDDEAWELFIDNVDDK--LXXXXXXXXXXXXXECCGLPL 96
           +RSLEVC  M     +KVE L+ +EAW LF+DN+  +  L             EC GLPL
Sbjct: 276 SRSLEVCRRMNCQNNVKVEPLAKEEAWTLFLDNLGQQTTLSPEVTKVARSVAKECAGLPL 335

Query: 95  AIITIGRAMRS-KDVGEWRVALSDLRES 15
           AIIT+ R+MR  +++ EWR AL +LR +
Sbjct: 336 AIITMARSMRGVEEICEWRHALEELRNT 363


>ref|XP_002868530.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314366|gb|EFH44789.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 851

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 41/90 (45%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
 Frame = -2

Query: 269 TRSLEVCHEMQFDKYLKVEQLSDDEAWELFIDNVDD---KLXXXXXXXXXXXXXECCGLP 99
           TRS EVC +M+ D  +KVE LS DEAW LF + V +   K              +CCGLP
Sbjct: 290 TRSKEVCKDMKADDEMKVECLSRDEAWVLFRNIVGETPLKCHQDIPTLARKVAEKCCGLP 349

Query: 98  LAIITIGRAMRSK-DVGEWRVALSDLREST 12
           LA+  IG+AM  K DV EWR A++ L  S+
Sbjct: 350 LALNVIGKAMACKEDVHEWRHAINVLNSSS 379


>dbj|BAD36180.1| putative RPS2 [Oryza sativa Japonica Group]
           gi|51091801|dbj|BAD36596.1| putative RPS2 [Oryza sativa
           Japonica Group] gi|125605155|gb|EAZ44191.1| hypothetical
           protein OsJ_28814 [Oryza sativa Japonica Group]
          Length = 967

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
 Frame = -2

Query: 269 TRSLEVCHEMQFDKYLKVEQLSDDEAWELFIDNVDDKLXXXXXXXXXXXXXECC---GLP 99
           TRS E+C  M+ DK +K+E L  DEAWELF  +  ++               C    GLP
Sbjct: 282 TRSEEICCVMEADKRIKLECLQPDEAWELFKYSATEETICADMPIENVAKRVCAKCRGLP 341

Query: 98  LAIITIGRAMRSKDV-GEWRVALSDLRESTSL 6
           LA+IT+GR+MR+K    EW  ALS   EST L
Sbjct: 342 LALITVGRSMRAKRTWREWENALSTFDESTQL 373


>ref|XP_002530179.1| Disease resistance protein RPM1, putative [Ricinus communis]
           gi|223530298|gb|EEF32193.1| Disease resistance protein
           RPM1, putative [Ricinus communis]
          Length = 969

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
 Frame = -2

Query: 269 TRSLEVCHEMQFDKYLKVEQLSDDEAWELFIDNVDDKLXXXXXXXXXXXXXECCGLPLAI 90
           +RSLEVC++M   + +KVE LS++EAW LF + + +K+              C GLPL I
Sbjct: 269 SRSLEVCNKMDCRRKIKVEPLSEEEAWNLFQEKLGEKILDDGSEIAKSIAKRCAGLPLGI 328

Query: 89  ITIGRAMRS-KDVGEWRVALSDLRES 15
           IT+  +M+   D+ EWR  L  L +S
Sbjct: 329 ITMASSMKGVDDLSEWRNTLRILEDS 354


>ref|NP_001062837.1| Os09g0311600 [Oryza sativa Japonica Group]
           gi|113631070|dbj|BAF24751.1| Os09g0311600 [Oryza sativa
           Japonica Group]
          Length = 991

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
 Frame = -2

Query: 269 TRSLEVCHEMQFDKYLKVEQLSDDEAWELFIDNVDDKLXXXXXXXXXXXXXECC---GLP 99
           TRS E+C  M+ DK +K+E L  DEAWELF  +  ++               C    GLP
Sbjct: 306 TRSEEICCVMEADKRIKLECLQPDEAWELFKYSATEETICADMPIENVAKRVCAKCRGLP 365

Query: 98  LAIITIGRAMRSKDV-GEWRVALSDLRESTSL 6
           LA+IT+GR+MR+K    EW  ALS   EST L
Sbjct: 366 LALITVGRSMRAKRTWREWENALSTFDESTQL 397


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