BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012459
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinu...    72   4e-11
ref|XP_004162678.1| PREDICTED: ATP-dependent zinc metalloproteas...    67   2e-09
ref|NP_567691.1| FtsH extracellular protease [Arabidopsis thalia...    66   3e-09
ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_003532440.1| PREDICTED: ATP-dependent zinc metalloproteas...    61   1e-07

>ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinus communis]
           gi|223549884|gb|EEF51372.1| Cell division protein ftsH,
           putative [Ricinus communis]
          Length = 925

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/76 (52%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = +1

Query: 121 PLPAHSKNLHFTRNIKRTPFLLHRSFTVYCNANYDSVSSRS-ISKDDFITRVLKENPSQV 297
           P   + K+L  T  I+     L RSFT  C  N  S S  S   KD F+TRVLKENPSQ+
Sbjct: 14  PPKTYRKSLQCTPIIRPKATFLRRSFTALCGLNSSSESQPSDTKKDGFVTRVLKENPSQL 73

Query: 298 EPRYKIGEKIVTLSEK 345
           EPRY+IGEK  TL EK
Sbjct: 74  EPRYRIGEKFYTLKEK 89


>ref|XP_004162678.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH 2-like [Cucumis
           sativus]
          Length = 962

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 53/116 (45%), Positives = 66/116 (56%), Gaps = 10/116 (8%)
 Frame = +1

Query: 28  MKTSDLFLSHRVSFHPQCEINRTPISKVSSIPLPAH--SKNLHFTRNIKRTPFL-LHRSF 198
           M + D  LS RV F PQ   N  P++     P   H  ++  +FTRN  RTPFL LH + 
Sbjct: 1   MASIDSLLSPRV-FLPQSSFN--PLT-----PRLNHLQTQRFNFTRN-PRTPFLFLHPNR 51

Query: 199 TVYCNANYDSVSSRSIS-------KDDFITRVLKENPSQVEPRYKIGEKIVTLSEK 345
             +C A   S  S S S       + DF+TRVLKENPSQ+EPRY IG+K+ TL EK
Sbjct: 52  FAFCLAVSKSSDSPSQSSGGDKAAQHDFVTRVLKENPSQLEPRYLIGDKLYTLKEK 107


>ref|NP_567691.1| FtsH extracellular protease [Arabidopsis thaliana]
           gi|2262118|gb|AAB63626.1| cell division protein isolog
           [Arabidopsis thaliana] gi|4972098|emb|CAB43894.1| cell
           division protein-like [Arabidopsis thaliana]
           gi|7269243|emb|CAB81312.1| cell division protein-like
           [Arabidopsis thaliana] gi|332659430|gb|AEE84830.1| FtsH
           extracellular protease [Arabidopsis thaliana]
          Length = 946

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/59 (55%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
 Frame = +1

Query: 181 LLHRSFTVYCNANYDSVSS----RSISKDDFITRVLKENPSQVEPRYKIGEKIVTLSEK 345
           +L RSFTV C     S SS     S + DDF+TRVLKENPSQVEPRY++G+K+  L E+
Sbjct: 45  ILRRSFTVLCELKTGSSSSGETNNSPAADDFVTRVLKENPSQVEPRYRVGDKLYNLKER 103


>ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|222846721|gb|EEE84268.1|
           predicted protein [Populus trichocarpa]
          Length = 932

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
 Frame = +1

Query: 118 IPLPAHSKNLHFTRNIKRTPFLLHRSFTVYCNANYDSVS-SRSISKDDFITRVLKENPSQ 294
           +P P + K L      +     L+RS TV C  N  S + S   +K+DF+TRVLK+NPSQ
Sbjct: 14  LPKP-YKKPLKSPPKFRSKTLFLNRSLTVLCEVNSASTAQSGDTNKEDFVTRVLKQNPSQ 72

Query: 295 VEPRYKIGEKIVTLSEK 345
           +EPRY IG+K  T  EK
Sbjct: 73  IEPRYLIGDKFYTSKEK 89


>ref|XP_003532440.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 2,
           chloroplastic-like [Glycine max]
          Length = 925

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 7/67 (10%)
 Frame = +1

Query: 166 KRTP-------FLLHRSFTVYCNANYDSVSSRSISKDDFITRVLKENPSQVEPRYKIGEK 324
           KRTP        LL RS TV C +   S ++     DDF++RVLKENPSQV+P+Y IG+K
Sbjct: 24  KRTPRHVPTQLLLLRRSPTVLCKS---SSATNEPGSDDFVSRVLKENPSQVQPKYLIGDK 80

Query: 325 IVTLSEK 345
           + TL EK
Sbjct: 81  LYTLKEK 87