BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012458
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK07303.1| predicted protein [Hordeum vulgare subsp. vulgare]    147   3e-33
ref|XP_002451509.1| hypothetical protein SORBIDRAFT_04g003030 [S...   145   7e-33
ref|XP_002283626.1| PREDICTED: ribosomal RNA small subunit methy...   143   4e-32
ref|NP_001045831.1| Os02g0137600 [Oryza sativa Japonica Group] g...   143   5e-32
ref|XP_003574334.1| PREDICTED: ribosomal RNA small subunit methy...   143   5e-32

>dbj|BAK07303.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 272

 Score =  147 bits (370), Expect = 3e-33
 Identities = 72/115 (62%), Positives = 90/115 (78%)
 Frame = +3

Query: 3   AVNDELRTLEHALSACFDCLSFGGRLAVISFHSLEDRIVKKMFHDLVNVSDGDAGEERSR 182
           AVNDELRTLE AL +CFDCL+  GRLAVISFHSLEDRIVK+ F +L++  + D  ++   
Sbjct: 160 AVNDELRTLEDALHSCFDCLATDGRLAVISFHSLEDRIVKQTFLELIHGGEADGDDDDLA 219

Query: 183 VLQLDNDGSEEETWVKKSINGTNGIILTKRPITPSEEEERLNQRCRSAKLRVVQK 347
              +D+   E+E W K+ + GTNG +LTKRPITPS+EEE+LNQRCRSAKLRV+QK
Sbjct: 220 YADIDD---EDEPWFKQRVQGTNGTVLTKRPITPSQEEEKLNQRCRSAKLRVIQK 271


>ref|XP_002451509.1| hypothetical protein SORBIDRAFT_04g003030 [Sorghum bicolor]
           gi|241931340|gb|EES04485.1| hypothetical protein
           SORBIDRAFT_04g003030 [Sorghum bicolor]
          Length = 445

 Score =  145 bits (367), Expect = 7e-33
 Identities = 72/115 (62%), Positives = 89/115 (77%)
 Frame = +3

Query: 3   AVNDELRTLEHALSACFDCLSFGGRLAVISFHSLEDRIVKKMFHDLVNVSDGDAGEERSR 182
           AVNDELR LE +L +CFDCL+ GGRLAVISFHSLEDRIVKK F +L++  + D  E+   
Sbjct: 330 AVNDELRVLEDSLHSCFDCLATGGRLAVISFHSLEDRIVKKTFLELIHGGEADDEEDDKD 389

Query: 183 VLQLDNDGSEEETWVKKSINGTNGIILTKRPITPSEEEERLNQRCRSAKLRVVQK 347
            L L +  +E+E W  + + G NG +LTKRPITPS+EEE+LNQRCRSAKLRV+QK
Sbjct: 390 DLALTDIVNEDEPWFGQRVQGRNGTVLTKRPITPSQEEEKLNQRCRSAKLRVIQK 444


>ref|XP_002283626.1| PREDICTED: ribosomal RNA small subunit methyltransferase H-like
           [Vitis vinifera]
          Length = 444

 Score =  143 bits (361), Expect = 4e-32
 Identities = 74/122 (60%), Positives = 90/122 (73%), Gaps = 7/122 (5%)
 Frame = +3

Query: 3   AVNDELRTLEHALSACFDCLSFGGRLAVISFHSLEDRIVKKMFHDLVNVSDGDAGEERSR 182
           AVNDEL+TLE +L ACF+CL+ GGRLAVISFHSLEDRIVK+ F D++N +  D   E   
Sbjct: 322 AVNDELKTLEDSLYACFECLTPGGRLAVISFHSLEDRIVKQTFLDIINSNGEDESGEGGG 381

Query: 183 -------VLQLDNDGSEEETWVKKSINGTNGIILTKRPITPSEEEERLNQRCRSAKLRVV 341
                  +  + ND  E+E W+K+ + G NG ILTKRPITPSEEEERLN+R RSAKLRV+
Sbjct: 382 QEGCGKDLRNIRNDNDEKEAWIKQMVQGWNGTILTKRPITPSEEEERLNRRSRSAKLRVI 441

Query: 342 QK 347
           QK
Sbjct: 442 QK 443


>ref|NP_001045831.1| Os02g0137600 [Oryza sativa Japonica Group]
           gi|42409129|dbj|BAD10379.1| putative methyltransferase
           [Oryza sativa Japonica Group]
           gi|42409260|dbj|BAD10523.1| putative methyltransferase
           [Oryza sativa Japonica Group]
           gi|113535362|dbj|BAF07745.1| Os02g0137600 [Oryza sativa
           Japonica Group] gi|125538002|gb|EAY84397.1| hypothetical
           protein OsI_05773 [Oryza sativa Indica Group]
          Length = 436

 Score =  143 bits (360), Expect = 5e-32
 Identities = 74/115 (64%), Positives = 88/115 (76%)
 Frame = +3

Query: 3   AVNDELRTLEHALSACFDCLSFGGRLAVISFHSLEDRIVKKMFHDLVNVSDGDAGEERSR 182
           AVNDELRTLE AL ACFDCL+  GRLAVISFHSLEDRIVK+ F +L++  + D  E+   
Sbjct: 324 AVNDELRTLEDALHACFDCLATDGRLAVISFHSLEDRIVKQTFLELIHEDEIDDDEDDLV 383

Query: 183 VLQLDNDGSEEETWVKKSINGTNGIILTKRPITPSEEEERLNQRCRSAKLRVVQK 347
              +D   SE+E W K+ + G NG ILTKRPI+PS+EEE LNQRCRSAKLRV+QK
Sbjct: 384 SADID---SEDEPWFKQRVQGKNGTILTKRPISPSQEEEELNQRCRSAKLRVIQK 435


>ref|XP_003574334.1| PREDICTED: ribosomal RNA small subunit methyltransferase H-like
           [Brachypodium distachyon]
          Length = 428

 Score =  143 bits (360), Expect = 5e-32
 Identities = 73/115 (63%), Positives = 88/115 (76%)
 Frame = +3

Query: 3   AVNDELRTLEHALSACFDCLSFGGRLAVISFHSLEDRIVKKMFHDLVNVSDGDAGEERSR 182
           AVNDELR LE  L +CFDCL+  GRLAVISFHSLEDRIVK+ F +L++    D G+E   
Sbjct: 316 AVNDELRILEDTLHSCFDCLATDGRLAVISFHSLEDRIVKQTFLELIHGDGVDDGDEDLV 375

Query: 183 VLQLDNDGSEEETWVKKSINGTNGIILTKRPITPSEEEERLNQRCRSAKLRVVQK 347
              +D+   E+E W K+ + G NGIILTKRPITPS+EEE+LNQRCRSAKLRV+QK
Sbjct: 376 CTDIDD---EDEPWFKQRVKGMNGIILTKRPITPSQEEEKLNQRCRSAKLRVIQK 427