BLASTX nr result

ID: Coptis24_contig00012452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012452
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|2...    74   3e-11
ref|XP_002530545.1| protein binding protein, putative [Ricinus c...    68   2e-09
ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261...    64   4e-08
emb|CAN66246.1| hypothetical protein VITISV_033016 [Vitis vinifera]    64   4e-08
dbj|BAF80453.1| DC1 domain containing protein [Nicotiana tabacum]      58   2e-06

>ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|222858396|gb|EEE95943.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 29/45 (64%), Positives = 34/45 (75%)
 Frame = +1

Query: 1   SVKHQSHSHPLKLIYNPPYQTKGLSCDVCQKLGSK*WLYRCNVCE 135
           S+ HQSH H L L + PPYQTKG SCD+C K+GS  WLYRC+ CE
Sbjct: 120 SLAHQSHPHQLNLAFYPPYQTKGFSCDICHKIGSNHWLYRCSACE 164


>ref|XP_002530545.1| protein binding protein, putative [Ricinus communis]
           gi|223529907|gb|EEF31836.1| protein binding protein,
           putative [Ricinus communis]
          Length = 324

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 27/45 (60%), Positives = 34/45 (75%)
 Frame = +1

Query: 1   SVKHQSHSHPLKLIYNPPYQTKGLSCDVCQKLGSK*WLYRCNVCE 135
           S+ +Q H H L+L ++PPY TKG SCD+CQK+GS  WLYRC  CE
Sbjct: 121 SLTNQFHPHLLQLTFDPPYHTKGFSCDICQKIGSNHWLYRCAPCE 165


>ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261320 [Vitis vinifera]
          Length = 360

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 23/44 (52%), Positives = 32/44 (72%)
 Frame = +1

Query: 4   VKHQSHSHPLKLIYNPPYQTKGLSCDVCQKLGSK*WLYRCNVCE 135
           + HQSH H L L ++PPY  K  SCD+C+++G+  WLYRC+ CE
Sbjct: 126 LNHQSHHHRLALSFSPPYHNKSFSCDICRQIGTSHWLYRCDECE 169


>emb|CAN66246.1| hypothetical protein VITISV_033016 [Vitis vinifera]
          Length = 366

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 23/44 (52%), Positives = 32/44 (72%)
 Frame = +1

Query: 4   VKHQSHSHPLKLIYNPPYQTKGLSCDVCQKLGSK*WLYRCNVCE 135
           + HQSH H L L ++PPY  K  SCD+C+++G+  WLYRC+ CE
Sbjct: 132 LNHQSHHHRLALSFSPPYHNKSFSCDICRQIGTSHWLYRCDECE 175


>dbj|BAF80453.1| DC1 domain containing protein [Nicotiana tabacum]
          Length = 212

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 22/43 (51%), Positives = 28/43 (65%)
 Frame = +1

Query: 4   VKHQSHSHPLKLIYNPPYQTKGLSCDVCQKLGSK*WLYRCNVC 132
           V H SH H L L ++PPY  K   CD+C+K+G+  WLYRC  C
Sbjct: 129 VTHWSHHHQLDLKFSPPYPGKSFCCDICKKVGTNHWLYRCQTC 171


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