BLASTX nr result

ID: Coptis24_contig00012451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012451
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261...   110   2e-22
emb|CAN66246.1| hypothetical protein VITISV_033016 [Vitis vinifera]   110   2e-22
ref|XP_002330854.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002530545.1| protein binding protein, putative [Ricinus c...   101   7e-20

>ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|222858396|gb|EEE95943.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  117 bits (292), Expect = 1e-24
 Identities = 52/96 (54%), Positives = 63/96 (65%)
 Frame = +3

Query: 3   CKYVLHILCSQVPQFLHHPADPNHALTLISTPADQQEGILTILCDACGEQPNGFRYNCST 182
           C + LHI C+Q+P  + HP  P H LTL STP        +  CD CG Q NGF Y+C+T
Sbjct: 49  CNFTLHISCTQMPTLITHPCHPIHPLTLFSTPVYPGG---SFNCDGCGLQGNGFNYHCTT 105

Query: 183 CNLDFHILCAAMPPSLRHQAHPHSLNLAFNPPYQTK 290
           C+ D H++CA  P SL HQ+HPH LNLAF PPYQTK
Sbjct: 106 CDFDVHMMCATNPLSLAHQSHPHQLNLAFYPPYQTK 141


>ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261320 [Vitis vinifera]
          Length = 360

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/96 (53%), Positives = 63/96 (65%)
 Frame = +3

Query: 3   CKYVLHILCSQVPQFLHHPADPNHALTLISTPADQQEGILTILCDACGEQPNGFRYNCST 182
           C Y LHI CSQ+PQ + H     HAL+L+  PA   EG+    CDACG+Q NGF Y+C  
Sbjct: 54  CNYFLHISCSQMPQQITHSFHKAHALSLLPNPA-YPEGLFN--CDACGKQGNGFSYHCGV 110

Query: 183 CNLDFHILCAAMPPSLRHQAHPHSLNLAFNPPYQTK 290
           CN+D HILCA+ P  L HQ+H H L L+F+PPY  K
Sbjct: 111 CNIDLHILCASKPLFLNHQSHHHRLALSFSPPYHNK 146


>emb|CAN66246.1| hypothetical protein VITISV_033016 [Vitis vinifera]
          Length = 366

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/96 (53%), Positives = 63/96 (65%)
 Frame = +3

Query: 3   CKYVLHILCSQVPQFLHHPADPNHALTLISTPADQQEGILTILCDACGEQPNGFRYNCST 182
           C Y LHI CSQ+PQ + H     HAL+L+  PA   EG+    CDACG+Q NGF Y+C  
Sbjct: 60  CNYFLHISCSQMPQQITHSFHKAHALSLLPNPA-YPEGLFN--CDACGKQGNGFSYHCGV 116

Query: 183 CNLDFHILCAAMPPSLRHQAHPHSLNLAFNPPYQTK 290
           CN+D HILCA+ P  L HQ+H H L L+F+PPY  K
Sbjct: 117 CNIDLHILCASKPLFLNHQSHHHRLALSFSPPYHNK 152


>ref|XP_002330854.1| predicted protein [Populus trichocarpa] gi|222872676|gb|EEF09807.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/93 (51%), Positives = 58/93 (62%)
 Frame = +3

Query: 3   CKYVLHILCSQVPQFLHHPADPNHALTLISTPADQQEGILTILCDACGEQPNGFRYNCST 182
           C Y LH+ CSQ+PQ + HP   NH L+L+STP    +      CDACG+Q NGF Y+C T
Sbjct: 54  CNYFLHVSCSQMPQQITHPYHQNHVLSLLSTPMYPGD---LFNCDACGKQGNGFSYHCGT 110

Query: 183 CNLDFHILCAAMPPSLRHQAHPHSLNLAFNPPY 281
           CN+  H  CAAMP  L HQ+H H LNL    PY
Sbjct: 111 CNIYIHTTCAAMPLVLTHQSHHHQLNLTPFAPY 143


>ref|XP_002530545.1| protein binding protein, putative [Ricinus communis]
           gi|223529907|gb|EEF31836.1| protein binding protein,
           putative [Ricinus communis]
          Length = 324

 Score =  101 bits (251), Expect = 7e-20
 Identities = 45/96 (46%), Positives = 59/96 (61%)
 Frame = +3

Query: 3   CKYVLHILCSQVPQFLHHPADPNHALTLISTPADQQEGILTILCDACGEQPNGFRYNCST 182
           C + LH+ CSQ+P  + HP+ PNH L L+ +P     G+ +  CDACG    GF Y+C+ 
Sbjct: 50  CNFTLHLSCSQLPSLITHPSHPNHTLDLLPSPI-YPNGVFS--CDACGHGGLGFGYHCNH 106

Query: 183 CNLDFHILCAAMPPSLRHQAHPHSLNLAFNPPYQTK 290
           C+ D H  CA  P SL +Q HPH L L F+PPY TK
Sbjct: 107 CSFDIHTTCAQNPLSLTNQFHPHLLQLTFDPPYHTK 142


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