BLASTX nr result

ID: Coptis24_contig00012443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012443
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83912.1| hypothetical protein VITISV_000582 [Vitis vinifera]   129   3e-28
ref|XP_004153883.1| PREDICTED: uncharacterized protein LOC101208...   127   7e-28
emb|CAA73042.1| polyprotein [Ananas comosus]                          126   2e-27
gb|ADU56212.1| gag-pol polyprotein [Solanum lycopersicum]             126   2e-27
emb|CAN83518.1| hypothetical protein VITISV_035077 [Vitis vinifera]   124   8e-27

>emb|CAN83912.1| hypothetical protein VITISV_000582 [Vitis vinifera]
          Length = 1074

 Score =  129 bits (323), Expect = 3e-28
 Identities = 57/81 (70%), Positives = 70/81 (86%)
 Frame = -1

Query: 243 PGLPPSREIYFCIDLVPGTTPIARTPYLMAPTELRELKAQIQDLLKQGFIQRSISPWGAP 64
           PGLPP RE+ F ID+ PGTTPI++ PY MAP EL+ELK Q+Q+LL +GFI+ S+SPWGAP
Sbjct: 502 PGLPPEREVDFTIDVAPGTTPISKAPYRMAPLELKELKIQLQELLDKGFIRLSVSPWGAP 561

Query: 63  VLFVKKKDGSLRLCIDFREMN 1
           VLFVKK DGS+RLCID+RE+N
Sbjct: 562 VLFVKKNDGSMRLCIDYRELN 582


>ref|XP_004153883.1| PREDICTED: uncharacterized protein LOC101208523, partial [Cucumis
           sativus]
          Length = 804

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/81 (72%), Positives = 69/81 (85%)
 Frame = -1

Query: 243 PGLPPSREIYFCIDLVPGTTPIARTPYLMAPTELRELKAQIQDLLKQGFIQRSISPWGAP 64
           PGLPP REI F I+L P TTPI+R PY MAP EL+ELK Q+Q+LL +GFIQ S+S WGAP
Sbjct: 593 PGLPPHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKGFIQPSVSSWGAP 652

Query: 63  VLFVKKKDGSLRLCIDFREMN 1
           VLFVKKKDGS+RLCID+RE+N
Sbjct: 653 VLFVKKKDGSMRLCIDYRELN 673


>emb|CAA73042.1| polyprotein [Ananas comosus]
          Length = 871

 Score =  126 bits (317), Expect = 2e-27
 Identities = 58/75 (77%), Positives = 68/75 (90%)
 Frame = -1

Query: 225 REIYFCIDLVPGTTPIARTPYLMAPTELRELKAQIQDLLKQGFIQRSISPWGAPVLFVKK 46
           REI F IDLVPGTTPI++ PY MAP ELREL+AQ+QDLL +GFI+ S+SPWGAPVLFVKK
Sbjct: 3   REIEFVIDLVPGTTPISKAPYRMAPAELRELRAQLQDLLDKGFIRPSVSPWGAPVLFVKK 62

Query: 45  KDGSLRLCIDFREMN 1
           KDGSLRLC+D+RE+N
Sbjct: 63  KDGSLRLCVDYRELN 77


>gb|ADU56212.1| gag-pol polyprotein [Solanum lycopersicum]
          Length = 624

 Score =  126 bits (316), Expect = 2e-27
 Identities = 57/81 (70%), Positives = 68/81 (83%)
 Frame = -1

Query: 243 PGLPPSREIYFCIDLVPGTTPIARTPYLMAPTELRELKAQIQDLLKQGFIQRSISPWGAP 64
           PG+PP R+I FCIDL PGT PI+  PY MAP ELRELKAQ+Q+LL +GFI+ S SPWGAP
Sbjct: 21  PGMPPDRDIDFCIDLEPGTRPISIPPYRMAPAELRELKAQLQELLSKGFIRPSASPWGAP 80

Query: 63  VLFVKKKDGSLRLCIDFREMN 1
           VLFVK KDGS R+CID+R++N
Sbjct: 81  VLFVKTKDGSFRMCIDYRQLN 101


>emb|CAN83518.1| hypothetical protein VITISV_035077 [Vitis vinifera]
          Length = 1194

 Score =  124 bits (311), Expect = 8e-27
 Identities = 55/81 (67%), Positives = 69/81 (85%)
 Frame = -1

Query: 243 PGLPPSREIYFCIDLVPGTTPIARTPYLMAPTELRELKAQIQDLLKQGFIQRSISPWGAP 64
           PGLPP +E+ F ID+  GTTPI++ PY MAP EL+ELK Q+Q+LL +GFI+ S+SPWGAP
Sbjct: 379 PGLPPEKEVEFTIDVALGTTPISKAPYRMAPLELKELKIQLQELLDKGFIRPSVSPWGAP 438

Query: 63  VLFVKKKDGSLRLCIDFREMN 1
           VLFVKK DGS+RLCID+RE+N
Sbjct: 439 VLFVKKNDGSMRLCIDYRELN 459


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