BLASTX nr result

ID: Coptis24_contig00012438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012438
         (976 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_566529.1| palmitoyl-monogalactosyldiacylglycerol delta-7 ...   111   2e-22
ref|XP_002882967.1| hypothetical protein ARALYDRAFT_479040 [Arab...   111   2e-22
ref|XP_003604375.1| Palmitoyl-monogalactosyldiacylglycerol delta...   106   4e-22
gb|AAK92773.1| putative delta 9 desaturase [Arabidopsis thaliana]     110   7e-22
gb|AAM63459.1| putative delta 9 desaturase [Arabidopsis thaliana]     108   3e-21

>ref|NP_566529.1| palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase
           [Arabidopsis thaliana]
           gi|62510457|sp|Q949X0.2|ADS3_ARATH RecName:
           Full=Palmitoyl-monogalactosyldiacylglycerol delta-7
           desaturase, chloroplastic; AltName: Full=FAD5; AltName:
           Full=Monogalactosyldiacylglycerol-specific palmitic acid
           desaturase; Flags: Precursor gi|11994357|dbj|BAB02316.1|
           delta 9 desaturase-like protein [Arabidopsis thaliana]
           gi|24030393|gb|AAN41357.1| putative delta 9 desaturase
           [Arabidopsis thaliana] gi|48927606|dbj|BAD23903.1|
           monogalactosyldiacylglycerol-specific palmitic acid
           desaturase [Arabidopsis thaliana]
           gi|57546098|gb|AAW51920.1|
           palmitoyl-monogalactosyldiacylglycerol delta7-desaturase
           [Arabidopsis thaliana] gi|332642216|gb|AEE75737.1|
           palmitoyl-monogalactosyldiacylglycerol delta-7
           desaturase [Arabidopsis thaliana]
          Length = 371

 Score =  111 bits (278), Expect = 2e-22
 Identities = 58/123 (47%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
 Frame = +1

Query: 262 LFGISGRSNILGEPSQ---PHRYHHKFTDTDRDPHSPIKGFWFSHMGWIFYDNYHVPMQM 432
           LF   G   + G P      HRYHH+F D+DRDPHSP+ GFWFSHM W+F  N    +  
Sbjct: 165 LFAYCGAQALQGNPIDWVSTHRYHHQFCDSDRDPHSPLDGFWFSHMNWMFDTN---TITQ 221

Query: 433 QCQLLVR*NDSYDVL*GENYVNVGDLVRQCYYRFLETTVVIHIYLRAVLLYMLGGFPFVV 612
           +C              GE   NVGDL +Q +YRFL TT ++H    AV LY +GGFPF+V
Sbjct: 222 RC--------------GEPN-NVGDLEKQPFYRFLRTTYILHPLALAVALYAMGGFPFIV 266

Query: 613 WGM 621
           WGM
Sbjct: 267 WGM 269


>ref|XP_002882967.1| hypothetical protein ARALYDRAFT_479040 [Arabidopsis lyrata subsp.
           lyrata] gi|297328807|gb|EFH59226.1| hypothetical protein
           ARALYDRAFT_479040 [Arabidopsis lyrata subsp. lyrata]
          Length = 371

 Score =  111 bits (278), Expect = 2e-22
 Identities = 58/123 (47%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
 Frame = +1

Query: 262 LFGISGRSNILGEPSQ---PHRYHHKFTDTDRDPHSPIKGFWFSHMGWIFYDNYHVPMQM 432
           LF   G   + G P      HRYHH+F D+DRDPHSP+ GFWFSHM W+F  N    +  
Sbjct: 165 LFAYCGAQALQGNPIDWVSTHRYHHQFCDSDRDPHSPLDGFWFSHMNWMFDTN---TITQ 221

Query: 433 QCQLLVR*NDSYDVL*GENYVNVGDLVRQCYYRFLETTVVIHIYLRAVLLYMLGGFPFVV 612
           +C              GE   NVGDL +Q +YRFL TT ++H    AV LY +GGFPF+V
Sbjct: 222 RC--------------GEPN-NVGDLEKQPFYRFLRTTYILHPVALAVALYAMGGFPFIV 266

Query: 613 WGM 621
           WGM
Sbjct: 267 WGM 269


>ref|XP_003604375.1| Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase [Medicago
           truncatula] gi|355505430|gb|AES86572.1|
           Palmitoyl-monogalactosyldiacylglycerol delta-7
           desaturase [Medicago truncatula]
          Length = 572

 Score =  106 bits (265), Expect(2) = 4e-22
 Identities = 50/103 (48%), Positives = 66/103 (64%)
 Frame = +1

Query: 313 HRYHHKFTDTDRDPHSPIKGFWFSHMGWIFYDNYHVPMQMQCQLLVR*NDSYDVL*GENY 492
           HRYHH+F D+++DPHSPI+GFWFSHM W+F  N    +  +C              GE  
Sbjct: 201 HRYHHQFCDSEKDPHSPIEGFWFSHMSWLFDTN---SIAERC--------------GEP- 242

Query: 493 VNVGDLVRQCYYRFLETTVVIHIYLRAVLLYMLGGFPFVVWGM 621
            NVGDL +Q +YRFL +T ++H +    LLY +GGFPF+VWGM
Sbjct: 243 TNVGDLEKQSFYRFLRSTYMVHPFALGALLYAIGGFPFLVWGM 285



 Score = 25.0 bits (53), Expect(2) = 4e-22
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = +2

Query: 203 HRGSLMRIWQIPSMSDDLQNY---LEYQGDPIFWVSPH 307
           HR    R +++P   +    Y   L  QG+PI WVS H
Sbjct: 164 HRNLSHRSFKLPKWLEYFFAYCGVLALQGNPIDWVSTH 201


>gb|AAK92773.1| putative delta 9 desaturase [Arabidopsis thaliana]
          Length = 371

 Score =  110 bits (274), Expect = 7e-22
 Identities = 57/123 (46%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
 Frame = +1

Query: 262 LFGISGRSNILGEPSQ---PHRYHHKFTDTDRDPHSPIKGFWFSHMGWIFYDNYHVPMQM 432
           LF   G   + G P      HRYHH+F D+DRDPHSP+ GFWF HM W+F  N    +  
Sbjct: 165 LFAYCGAQALQGNPIDWVSTHRYHHQFCDSDRDPHSPLDGFWFGHMNWMFDTN---TITQ 221

Query: 433 QCQLLVR*NDSYDVL*GENYVNVGDLVRQCYYRFLETTVVIHIYLRAVLLYMLGGFPFVV 612
           +C              GE   NVGDL +Q +YRFL TT ++H    AV LY +GGFPF+V
Sbjct: 222 RC--------------GEPN-NVGDLEKQPFYRFLRTTYILHPLALAVALYAMGGFPFIV 266

Query: 613 WGM 621
           WGM
Sbjct: 267 WGM 269


>gb|AAM63459.1| putative delta 9 desaturase [Arabidopsis thaliana]
          Length = 371

 Score =  108 bits (269), Expect = 3e-21
 Identities = 57/123 (46%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
 Frame = +1

Query: 262 LFGISGRSNILGEPSQ---PHRYHHKFTDTDRDPHSPIKGFWFSHMGWIFYDNYHVPMQM 432
           LF   G   + G P      HRYHH+F D+DRDPHSP+ GFWFSHM W+F  N    +  
Sbjct: 165 LFAYCGAQALQGNPIDWVSTHRYHHQFCDSDRDPHSPLDGFWFSHMNWMFDTN---TITQ 221

Query: 433 QCQLLVR*NDSYDVL*GENYVNVGDLVRQCYYRFLETTVVIHIYLRAVLLYMLGGFPFVV 612
           +C              GE   NVG L +Q +YRFL TT ++H    AV LY +GGFPF+V
Sbjct: 222 RC--------------GEPN-NVGVLEKQPFYRFLRTTYILHPLALAVALYAMGGFPFIV 266

Query: 613 WGM 621
           WGM
Sbjct: 267 WGM 269


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