BLASTX nr result

ID: Coptis24_contig00012414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012414
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140791.1| PREDICTED: putative dihydrodipicolinate redu...   103   5e-42
ref|XP_004173790.1| PREDICTED: putative dihydrodipicolinate redu...   103   5e-42
ref|XP_002322434.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-41
ref|XP_002274702.1| PREDICTED: putative dihydrodipicolinate redu...    98   6e-41
emb|CBI31836.3| unnamed protein product [Vitis vinifera]               96   1e-39

>ref|XP_004140791.1| PREDICTED: putative dihydrodipicolinate reductase 3,
           chloroplastic-like [Cucumis sativus]
          Length = 300

 Score =  103 bits (258), Expect(2) = 5e-42
 Identities = 51/79 (64%), Positives = 61/79 (77%)
 Frame = -2

Query: 499 MAALNSSFQLTEYKRTHKRLVTSPIICSVQTSQNNIKVVINGATKDIGKAAILAVTKARG 320
           MA L   F  T YK + K+   S I+CSVQ SQ NIKV+INGA K+IG+AA++AVTKARG
Sbjct: 1   MATLGCQFPFTVYKNSKKKRPGSSILCSVQPSQGNIKVIINGAAKEIGRAAVIAVTKARG 60

Query: 319 MEIAGAVDSHLVGQDIGMV 263
           ME+AGAVDSH VG+DIG V
Sbjct: 61  MEVAGAVDSHCVGEDIGKV 79



 Score = 92.8 bits (229), Expect(2) = 5e-42
 Identities = 45/53 (84%), Positives = 49/53 (92%)
 Frame = -1

Query: 161 VCNMEEALEIPIINDLTMVLGSISQSKATGVVVDLTEPSTVYDNVKQATAFGM 3
           VC+MEE LE+PI+NDLTMVLGSISQSK TGVVVD TEPS VY+NVKQATAFGM
Sbjct: 79  VCDMEEPLELPILNDLTMVLGSISQSKETGVVVDFTEPSKVYENVKQATAFGM 131


>ref|XP_004173790.1| PREDICTED: putative dihydrodipicolinate reductase 3,
           chloroplastic-like [Cucumis sativus]
          Length = 189

 Score =  103 bits (258), Expect(2) = 5e-42
 Identities = 51/79 (64%), Positives = 61/79 (77%)
 Frame = -2

Query: 499 MAALNSSFQLTEYKRTHKRLVTSPIICSVQTSQNNIKVVINGATKDIGKAAILAVTKARG 320
           MA L   F  T YK + K+   S I+CSVQ SQ NIKV+INGA K+IG+AA++AVTKARG
Sbjct: 1   MATLGCQFPFTVYKNSKKKRPGSSILCSVQPSQGNIKVIINGAAKEIGRAAVIAVTKARG 60

Query: 319 MEIAGAVDSHLVGQDIGMV 263
           ME+AGAVDSH VG+DIG V
Sbjct: 61  MEVAGAVDSHCVGEDIGKV 79



 Score = 92.8 bits (229), Expect(2) = 5e-42
 Identities = 45/53 (84%), Positives = 49/53 (92%)
 Frame = -1

Query: 161 VCNMEEALEIPIINDLTMVLGSISQSKATGVVVDLTEPSTVYDNVKQATAFGM 3
           VC+MEE LE+PI+NDLTMVLGSISQSK TGVVVD TEPS VY+NVKQATAFGM
Sbjct: 79  VCDMEEPLELPILNDLTMVLGSISQSKETGVVVDFTEPSKVYENVKQATAFGM 131


>ref|XP_002322434.1| predicted protein [Populus trichocarpa] gi|222869430|gb|EEF06561.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score = 98.6 bits (244), Expect(2) = 3e-41
 Identities = 51/78 (65%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
 Frame = -2

Query: 499 MAALNSSFQLTEYKRTHKRLVTSPII-CSVQTSQNNIKVVINGATKDIGKAAILAVTKAR 323
           MAAL+  F  T +K   K ++T P I CS+Q SQ+NIKVVINGA K+IG+AA++AVTKAR
Sbjct: 1   MAALSCHFHFTVHK-VSKNVITRPFISCSMQPSQSNIKVVINGAAKEIGRAAVIAVTKAR 59

Query: 322 GMEIAGAVDSHLVGQDIG 269
           GME+AGAVDSH VG+DIG
Sbjct: 60  GMEVAGAVDSHFVGEDIG 77



 Score = 95.9 bits (237), Expect(2) = 3e-41
 Identities = 47/53 (88%), Positives = 50/53 (94%)
 Frame = -1

Query: 161 VCNMEEALEIPIINDLTMVLGSISQSKATGVVVDLTEPSTVYDNVKQATAFGM 3
           +C+MEE LEIPIINDLTMVLGSISQSK TGVVVD T+PSTVYDNVKQATAFGM
Sbjct: 79  LCDMEEPLEIPIINDLTMVLGSISQSKETGVVVDFTDPSTVYDNVKQATAFGM 131


>ref|XP_002274702.1| PREDICTED: putative dihydrodipicolinate reductase 3, chloroplastic
           [Vitis vinifera] gi|147816661|emb|CAN68386.1|
           hypothetical protein VITISV_012454 [Vitis vinifera]
          Length = 302

 Score = 97.8 bits (242), Expect(2) = 6e-41
 Identities = 48/53 (90%), Positives = 51/53 (96%)
 Frame = -1

Query: 161 VCNMEEALEIPIINDLTMVLGSISQSKATGVVVDLTEPSTVYDNVKQATAFGM 3
           VC MEEALE+PIINDLTMVLGSISQSKATGVVVD T+PSTVY+NVKQATAFGM
Sbjct: 81  VCGMEEALEMPIINDLTMVLGSISQSKATGVVVDFTDPSTVYENVKQATAFGM 133



 Score = 95.5 bits (236), Expect(2) = 6e-41
 Identities = 53/80 (66%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
 Frame = -2

Query: 496 AALNSSFQLTEYKRTHKRLVTSPII-CSVQT-SQNNIKVVINGATKDIGKAAILAVTKAR 323
           AAL+S F  T Y R+ K + T  ++ CS+Q  SQ+NIKVVINGA K+IG+AA++AVTKAR
Sbjct: 3   AALSSQFHPTTY-RSIKNVKTKQLVSCSMQQPSQSNIKVVINGAAKEIGRAAVVAVTKAR 61

Query: 322 GMEIAGAVDSHLVGQDIGMV 263
           GME+AGAVDSHLVG+DIGMV
Sbjct: 62  GMEVAGAVDSHLVGEDIGMV 81


>emb|CBI31836.3| unnamed protein product [Vitis vinifera]
          Length = 303

 Score = 95.5 bits (236), Expect(2) = 1e-39
 Identities = 53/80 (66%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
 Frame = -2

Query: 496 AALNSSFQLTEYKRTHKRLVTSPII-CSVQT-SQNNIKVVINGATKDIGKAAILAVTKAR 323
           AAL+S F  T Y R+ K + T  ++ CS+Q  SQ+NIKVVINGA K+IG+AA++AVTKAR
Sbjct: 3   AALSSQFHPTTY-RSIKNVKTKQLVSCSMQQPSQSNIKVVINGAAKEIGRAAVVAVTKAR 61

Query: 322 GMEIAGAVDSHLVGQDIGMV 263
           GME+AGAVDSHLVG+DIGMV
Sbjct: 62  GMEVAGAVDSHLVGEDIGMV 81



 Score = 93.2 bits (230), Expect(2) = 1e-39
 Identities = 48/54 (88%), Positives = 51/54 (94%), Gaps = 1/54 (1%)
 Frame = -1

Query: 161 VCNMEEALEIPIINDLTMVLGSISQ-SKATGVVVDLTEPSTVYDNVKQATAFGM 3
           VC MEEALE+PIINDLTMVLGSISQ SKATGVVVD T+PSTVY+NVKQATAFGM
Sbjct: 81  VCGMEEALEMPIINDLTMVLGSISQQSKATGVVVDFTDPSTVYENVKQATAFGM 134


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