BLASTX nr result

ID: Coptis24_contig00012408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012408
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303058.1| predicted protein [Populus trichocarpa] gi|2...   226   4e-57
ref|XP_004149781.1| PREDICTED: uncharacterized protein LOC101211...   221   2e-55
ref|XP_002265905.2| PREDICTED: uncharacterized protein LOC100245...   213   3e-53
ref|XP_002532737.1| protein translocase, putative [Ricinus commu...   209   4e-52
ref|NP_001236000.1| uncharacterized protein LOC100526920 [Glycin...   208   9e-52

>ref|XP_002303058.1| predicted protein [Populus trichocarpa] gi|222844784|gb|EEE82331.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  226 bits (576), Expect = 4e-57
 Identities = 110/171 (64%), Positives = 135/171 (78%)
 Frame = -3

Query: 720 SWKERVFVPTLLAXXXXXXXGLISKHRKTHGVAHMSATYATNLSIVTGCYCGAREFVRAS 541
           +WKER+ +PTLLA       GL+SKHRK HG+A++S TYATN SIVTGCYCGAREFVR  
Sbjct: 27  NWKERILIPTLLAGITGGGVGLVSKHRKVHGLANISTTYATNFSIVTGCYCGAREFVRVV 86

Query: 540 RASGPDDLLNSAIGGFASGALLGRLQGGQIGAIKYSVIFAIVGTTVDFAALQLTSHIQKY 361
           R S PDDL+NSA+ GF SGALLGRLQGGQ GA +YSVIFA+VGTTVDFA ++L   +  +
Sbjct: 87  RKSEPDDLVNSAVAGFGSGALLGRLQGGQFGAFRYSVIFAVVGTTVDFATIKLRPALSNF 146

Query: 360 RESMDEEKKNSEQKTSWFRLPEWSPIQVLDEEALEAKRAREQQLLAQTTIG 208
           +ES+ +EK   E+K  W +LPEWSPIQVLDEEAL AK ARE++L A++ +G
Sbjct: 147 KESIFKEK---EKKPGWLKLPEWSPIQVLDEEALAAKEAREKELYARSALG 194


>ref|XP_004149781.1| PREDICTED: uncharacterized protein LOC101211202 [Cucumis sativus]
           gi|449529275|ref|XP_004171626.1| PREDICTED:
           uncharacterized protein LOC101232073 [Cucumis sativus]
          Length = 197

 Score =  221 bits (562), Expect = 2e-55
 Identities = 111/177 (62%), Positives = 136/177 (76%)
 Frame = -3

Query: 738 TSLKRWSWKERVFVPTLLAXXXXXXXGLISKHRKTHGVAHMSATYATNLSIVTGCYCGAR 559
           TS     WKER+F PTLLA       GL+SK+RK HG+A++SATYATNLSIV  CYCGAR
Sbjct: 20  TSSDYGGWKERIFYPTLLAGIVGGGAGLLSKYRKVHGLANISATYATNLSIVAACYCGAR 79

Query: 558 EFVRASRASGPDDLLNSAIGGFASGALLGRLQGGQIGAIKYSVIFAIVGTTVDFAALQLT 379
           EFVR SR S PDDL+NSAI GF +GALLGRLQGG++G+++YS++F IVGTTVD+A L+L 
Sbjct: 80  EFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGRLGSVRYSLMFTIVGTTVDYATLKLK 139

Query: 378 SHIQKYRESMDEEKKNSEQKTSWFRLPEWSPIQVLDEEALEAKRAREQQLLAQTTIG 208
             ++ Y+ES+       E  +SW +LPEWSPIQVLDEEAL AK+AREQQL AQ  +G
Sbjct: 140 PTLRSYKESI------IEGSSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALG 190


>ref|XP_002265905.2| PREDICTED: uncharacterized protein LOC100245423 [Vitis vinifera]
           gi|296085621|emb|CBI29410.3| unnamed protein product
           [Vitis vinifera]
          Length = 193

 Score =  213 bits (543), Expect = 3e-53
 Identities = 105/181 (58%), Positives = 136/181 (75%)
 Frame = -3

Query: 750 SEQDTSLKRWSWKERVFVPTLLAXXXXXXXGLISKHRKTHGVAHMSATYATNLSIVTGCY 571
           S  D+S     WKER F+PTLLA       GL+SK+RK HG+A++SATYA N +IVTGCY
Sbjct: 12  SSSDSSSSSEFWKERFFIPTLLAGIVGGGTGLVSKYRKVHGLANISATYAANFAIVTGCY 71

Query: 570 CGAREFVRASRASGPDDLLNSAIGGFASGALLGRLQGGQIGAIKYSVIFAIVGTTVDFAA 391
           CGAREFVR +R +GPDDL++SA+GGF SGA+LG LQGG+ GA++YSV+FA+ GT+VDFA 
Sbjct: 72  CGAREFVRRNRGTGPDDLISSAVGGFGSGAILGCLQGGRAGAVRYSVMFAVAGTSVDFAI 131

Query: 390 LQLTSHIQKYRESMDEEKKNSEQKTSWFRLPEWSPIQVLDEEALEAKRAREQQLLAQTTI 211
           L+L    + + ES+      S++   W +LPEWSPIQVLDEEAL AK+AREQ+L  Q ++
Sbjct: 132 LKLKPVWKNFSESI------SQKSEDWLKLPEWSPIQVLDEEALAAKKAREQKLYGQRSL 185

Query: 210 G 208
           G
Sbjct: 186 G 186


>ref|XP_002532737.1| protein translocase, putative [Ricinus communis]
           gi|223527514|gb|EEF29639.1| protein translocase,
           putative [Ricinus communis]
          Length = 203

 Score =  209 bits (533), Expect = 4e-52
 Identities = 101/167 (60%), Positives = 127/167 (76%)
 Frame = -3

Query: 720 SWKERVFVPTLLAXXXXXXXGLISKHRKTHGVAHMSATYATNLSIVTGCYCGAREFVRAS 541
           +WKER+ +PT+LA       GL+SKHR+THG+A +S  YATN +IVTGCYCGAREFVR S
Sbjct: 26  NWKERILIPTILAGIGGGGVGLVSKHRQTHGLASISTAYATNFAIVTGCYCGAREFVRVS 85

Query: 540 RASGPDDLLNSAIGGFASGALLGRLQGGQIGAIKYSVIFAIVGTTVDFAALQLTSHIQKY 361
           R S PDDL+NSA  GF +GALLGRLQGGQ GA +YS+IFA+VGTTVDFA ++L   ++ +
Sbjct: 86  RKSEPDDLVNSAFAGFGTGALLGRLQGGQFGAFRYSIIFAVVGTTVDFATIKLKPKLRSF 145

Query: 360 RESMDEEKKNSEQKTSWFRLPEWSPIQVLDEEALEAKRAREQQLLAQ 220
           ++S+  +K   E+K  W +LP W PIQVLDEEAL AK  RE+QL  Q
Sbjct: 146 KQSLYGDK---EKKGGWLKLPVWFPIQVLDEEALAAKEVREKQLYEQ 189


>ref|NP_001236000.1| uncharacterized protein LOC100526920 [Glycine max]
           gi|255631151|gb|ACU15941.1| unknown [Glycine max]
          Length = 203

 Score =  208 bits (530), Expect = 9e-52
 Identities = 99/167 (59%), Positives = 131/167 (78%)
 Frame = -3

Query: 720 SWKERVFVPTLLAXXXXXXXGLISKHRKTHGVAHMSATYATNLSIVTGCYCGAREFVRAS 541
           +WK R+ +PTLLA       GLISKHR+T G+A + + YA N +IVTGCYCGAREFV A+
Sbjct: 25  AWKSRIVIPTLLAGVAGAGAGLISKHRRTLGLATVCSNYAVNFTIVTGCYCGAREFVAAT 84

Query: 540 RASGPDDLLNSAIGGFASGALLGRLQGGQIGAIKYSVIFAIVGTTVDFAALQLTSHIQKY 361
           R +GPDD+LNSA+ GF +GALLGRLQGGQ+GAI+YSV+FA+VGTT DFA L+L   ++ +
Sbjct: 85  RKTGPDDILNSAVAGFGTGALLGRLQGGQLGAIRYSVMFAVVGTTADFAILKLKDALRDH 144

Query: 360 RESMDEEKKNSEQKTSWFRLPEWSPIQVLDEEALEAKRAREQQLLAQ 220
            +++ +  +NS++  +W +LPEW PIQVLDEEAL AKRA+E+Q L Q
Sbjct: 145 TKTIYQHIENSKKSGTWLKLPEWFPIQVLDEEALAAKRAQEEQFLQQ 191


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