BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012405
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM08561.1|AC092749_14 Putative retroelement [Oryza sativa Ja...    85   7e-15
ref|NP_001176100.1| Os10g0351414 [Oryza sativa Japonica Group] g...    85   7e-15
gb|EEC66781.1| hypothetical protein OsI_33174 [Oryza sativa Indi...    85   7e-15
gb|AAP53215.2| retrotransposon protein, putative, unclassified, ...    85   7e-15
gb|EEE60843.1| hypothetical protein OsJ_14468 [Oryza sativa Japo...    84   2e-14

>gb|AAM08561.1|AC092749_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1739

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
 Frame = +3

Query: 192  IYASPDPVICTTQWEQLHLFKP-PSRQPWLCLGDLNEVLKPEEKRRMVPFSPSKAQWLIQ 368
            IY  P     +  W ++  F    S +P  C+GDLNE++   EK  + P + ++      
Sbjct: 875  IYGDPSHRATSAMWSEISSFVVHSSHKPTFCMGDLNEIMHANEKYGLAPPNQNRINIFKH 934

Query: 369  TMNNYELFDIGYKGPVFTWCNGKKGRNKTHERIDKALANVEWRLCFPN 512
             +NN  L D+GY GP +TW N ++G++   ER+D+ LANVEW   +PN
Sbjct: 935  HVNNLGLMDMGYNGPAYTWSNKQQGKDLVLERLDRCLANVEWCFNYPN 982


>ref|NP_001176100.1| Os10g0351414 [Oryza sativa Japonica Group]
           gi|255679325|dbj|BAH94828.1| Os10g0351414 [Oryza sativa
           Japonica Group]
          Length = 912

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
 Frame = +3

Query: 192 IYASPDPVICTTQWEQLHLFKP-PSRQPWLCLGDLNEVLKPEEKRRMVPFSPSKAQWLIQ 368
           IY  P     +  W ++  F    S +P  C+GDLNE++   EK  + P + ++      
Sbjct: 99  IYGDPSHRATSAMWSEISSFVVHSSHKPTFCMGDLNEIMHANEKYGLAPPNQNRINIFKH 158

Query: 369 TMNNYELFDIGYKGPVFTWCNGKKGRNKTHERIDKALANVEWRLCFPN 512
            +NN  L D+GY GP +TW N ++G++   ER+D+ LANVEW   +PN
Sbjct: 159 HVNNLGLMDMGYNGPAYTWSNKQQGKDLVLERLDRCLANVEWCFNYPN 206


>gb|EEC66781.1| hypothetical protein OsI_33174 [Oryza sativa Indica Group]
          Length = 1144

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
 Frame = +3

Query: 192 IYASPDPVICTTQWEQLHLFKP-PSRQPWLCLGDLNEVLKPEEKRRMVPFSPSKAQWLIQ 368
           IY  P     +  W ++  F    S +P  C+GDLNE++   EK  + P + ++      
Sbjct: 645 IYGDPSHRATSAMWSEISSFVVHSSHRPTFCMGDLNEIMHANEKYGLAPPNQNRINIFKH 704

Query: 369 TMNNYELFDIGYKGPVFTWCNGKKGRNKTHERIDKALANVEWRLCFPN 512
            +NN  L D+GY GP +TW N ++G++   ER+D+ LANVEW   +PN
Sbjct: 705 HVNNLGLMDMGYNGPAYTWSNKQQGKDLVLERLDRCLANVEWCFNYPN 752


>gb|AAP53215.2| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1701

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
 Frame = +3

Query: 192  IYASPDPVICTTQWEQLHLFKP-PSRQPWLCLGDLNEVLKPEEKRRMVPFSPSKAQWLIQ 368
            IY  P     +  W ++  F    S +P  C+GDLNE++   EK  + P + ++      
Sbjct: 875  IYGDPSHRATSAMWSEISSFVVHSSHKPTFCMGDLNEIMHANEKYGLAPPNQNRINIFKH 934

Query: 369  TMNNYELFDIGYKGPVFTWCNGKKGRNKTHERIDKALANVEWRLCFPN 512
             +NN  L D+GY GP +TW N ++G++   ER+D+ LANVEW   +PN
Sbjct: 935  HVNNLGLMDMGYNGPAYTWSNKQQGKDLVLERLDRCLANVEWCFNYPN 982


>gb|EEE60843.1| hypothetical protein OsJ_14468 [Oryza sativa Japonica Group]
          Length = 1668

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
 Frame = +3

Query: 192  IYASPDPVICTTQWEQLHLFKPPSRQ-PWLCLGDLNEVLKPEEKRRMVPFSPSKAQWLIQ 368
            IY  P     +  W ++  F   S   P  C+GDLNE++   EK  + P + ++      
Sbjct: 699  IYGDPSHRATSAMWSEISSFVVHSSHIPTFCMGDLNEIMHANEKYGLAPPNQNRINIFKH 758

Query: 369  TMNNYELFDIGYKGPVFTWCNGKKGRNKTHERIDKALANVEWRLCFPN 512
             +NN  L D+GY GP +TW N ++G++   ER+D+ LANVEW   +PN
Sbjct: 759  HVNNLGLMDMGYNGPAYTWSNKQQGKDLVLERLDRCLANVEWCFDYPN 806