BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012401
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66462.1| hypothetical protein VITISV_035844 [Vitis vinifera]   152   3e-35
emb|CBI26949.3| unnamed protein product [Vitis vinifera]              151   6e-35
ref|XP_002280133.1| PREDICTED: probable ATP-dependent RNA helica...   151   6e-35
ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinu...   149   3e-34
ref|XP_002315906.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34

>emb|CAN66462.1| hypothetical protein VITISV_035844 [Vitis vinifera]
          Length = 1180

 Score =  152 bits (384), Expect = 3e-35
 Identities = 85/155 (54%), Positives = 106/155 (68%), Gaps = 4/155 (2%)
 Frame = -1

Query: 456  LLNPKMKIEIHRELLSAVRLLITEDQCDGRFVFGHQI----LKPSKXXXXXXXXXXXVIS 289
            LLNP+M I ++ ELLSAVRLLI+EDQCDGRFVF HQ+    +KPSK            +S
Sbjct: 1024 LLNPRMGIHMYHELLSAVRLLISEDQCDGRFVFSHQVGRQVVKPSKTSVTVMPKAL--VS 1081

Query: 288  RNXXXXXXXGDNAKNQLQTLVTRAGHENPVYKAYLVKNNQFQAMVEINGMQFTGQPCNNR 109
            R         DN+K+QLQTL+TRAG+  P YK   +KNNQF++ VE NGMQ  GQPCNN+
Sbjct: 1082 RTESGPGG--DNSKSQLQTLLTRAGYAAPTYKTKQLKNNQFRSTVEFNGMQIMGQPCNNK 1139

Query: 108  KLAEKDAAAQALLSLTGRLQACPVDIERMSLLLKQ 4
            K AEKDAAA+AL  L GR ++    I+ MS+LLK+
Sbjct: 1140 KFAEKDAAAEALQLLMGRTRSGHEYIDHMSMLLKK 1174


>emb|CBI26949.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score =  151 bits (381), Expect = 6e-35
 Identities = 85/155 (54%), Positives = 105/155 (67%), Gaps = 4/155 (2%)
 Frame = -1

Query: 456  LLNPKMKIEIHRELLSAVRLLITEDQCDGRFVFGHQI----LKPSKXXXXXXXXXXXVIS 289
            LLNP+M I ++ ELLSAVRLLI+EDQCDGRFVF HQ+    +KPSK            +S
Sbjct: 1025 LLNPRMGIHMYHELLSAVRLLISEDQCDGRFVFSHQVGRQVVKPSKTSVTVMPKAL--VS 1082

Query: 288  RNXXXXXXXGDNAKNQLQTLVTRAGHENPVYKAYLVKNNQFQAMVEINGMQFTGQPCNNR 109
            R         DN+K+QLQTL+TRAG+  P YK   +KNNQF++ VE NGMQ  GQPCNN+
Sbjct: 1083 RTESGPGG--DNSKSQLQTLLTRAGYAAPTYKTKQLKNNQFRSTVEFNGMQIMGQPCNNK 1140

Query: 108  KLAEKDAAAQALLSLTGRLQACPVDIERMSLLLKQ 4
            K AEKDAAA+AL  L G  Q+    I+ MS+LLK+
Sbjct: 1141 KFAEKDAAAEALQLLMGGTQSGHEYIDHMSMLLKK 1175


>ref|XP_002280133.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
            vinifera]
          Length = 1195

 Score =  151 bits (381), Expect = 6e-35
 Identities = 85/155 (54%), Positives = 105/155 (67%), Gaps = 4/155 (2%)
 Frame = -1

Query: 456  LLNPKMKIEIHRELLSAVRLLITEDQCDGRFVFGHQI----LKPSKXXXXXXXXXXXVIS 289
            LLNP+M I ++ ELLSAVRLLI+EDQCDGRFVF HQ+    +KPSK            +S
Sbjct: 1039 LLNPRMGIHMYHELLSAVRLLISEDQCDGRFVFSHQVGRQVVKPSKTSVTVMPKAL--VS 1096

Query: 288  RNXXXXXXXGDNAKNQLQTLVTRAGHENPVYKAYLVKNNQFQAMVEINGMQFTGQPCNNR 109
            R         DN+K+QLQTL+TRAG+  P YK   +KNNQF++ VE NGMQ  GQPCNN+
Sbjct: 1097 RTESGPGG--DNSKSQLQTLLTRAGYAAPTYKTKQLKNNQFRSTVEFNGMQIMGQPCNNK 1154

Query: 108  KLAEKDAAAQALLSLTGRLQACPVDIERMSLLLKQ 4
            K AEKDAAA+AL  L G  Q+    I+ MS+LLK+
Sbjct: 1155 KFAEKDAAAEALQLLMGGTQSGHEYIDHMSMLLKK 1189


>ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223534388|gb|EEF36096.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1172

 Score =  149 bits (375), Expect = 3e-34
 Identities = 77/151 (50%), Positives = 101/151 (66%)
 Frame = -1

Query: 456  LLNPKMKIEIHRELLSAVRLLITEDQCDGRFVFGHQILKPSKXXXXXXXXXXXVISRNXX 277
            LLNP+M +  + +LLSA+RLL++ED CDGRF+FG Q+LKPSK             + +  
Sbjct: 1020 LLNPRMDLHAYHDLLSAIRLLVSEDPCDGRFIFGCQVLKPSKMSVTPTQGALASRTESGP 1079

Query: 276  XXXXXGDNAKNQLQTLVTRAGHENPVYKAYLVKNNQFQAMVEINGMQFTGQPCNNRKLAE 97
                  DN+K+QLQTL+TRAG+  P YK   +KN+QF++ VE NGMQ  GQPCNN+K AE
Sbjct: 1080 GG----DNSKSQLQTLITRAGYAAPTYKTKQLKNSQFRSTVEFNGMQIMGQPCNNKKSAE 1135

Query: 96   KDAAAQALLSLTGRLQACPVDIERMSLLLKQ 4
            KDAAA+AL  L G  +  P  I  MS+LLK+
Sbjct: 1136 KDAAAEALRWLMGETRTGPEYINHMSMLLKK 1166


>ref|XP_002315906.1| predicted protein [Populus trichocarpa] gi|222864946|gb|EEF02077.1|
            predicted protein [Populus trichocarpa]
          Length = 1053

 Score =  149 bits (375), Expect = 3e-34
 Identities = 84/151 (55%), Positives = 98/151 (64%)
 Frame = -1

Query: 456  LLNPKMKIEIHRELLSAVRLLITEDQCDGRFVFGHQILKPSKXXXXXXXXXXXVISRNXX 277
            LLNP+M I +H ELLSAVRLL++ED CDGRFVFG    K SK            ISR   
Sbjct: 901  LLNPRMDIHMHHELLSAVRLLVSEDNCDGRFVFGCHFFKSSKPAVFATQPTL--ISRGDS 958

Query: 276  XXXXXGDNAKNQLQTLVTRAGHENPVYKAYLVKNNQFQAMVEINGMQFTGQPCNNRKLAE 97
                  DN+K+QLQTL+TRAG+  P YK   +KNNQF+A VE NGMQ  GQPCNN+K AE
Sbjct: 959  GPGG--DNSKSQLQTLLTRAGYAAPSYKTKQLKNNQFRATVEFNGMQIMGQPCNNKKSAE 1016

Query: 96   KDAAAQALLSLTGRLQACPVDIERMSLLLKQ 4
            KDAAA+AL  L G  Q     I  MS+LLK+
Sbjct: 1017 KDAAAEALQWLVGGTQTSQEYINHMSMLLKK 1047